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Lsi06G001410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like family protein, putative
Genome locationchr06:1409068..1420014
RNA-Seq ExpressionLsi06G001410
SyntenyLsi06G001410
Gene Ontology termsGO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR022618 - Defensin-like protein 20-27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66133.1 hypothetical protein Csa_007601 [Cucumis sativus]2.7e-1669.81Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM
        S+NT+AQLCCNNH +LG+C PGVDD  DGKCW HCI GCE+GGFCK++  GH+
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM

KGN66136.1 hypothetical protein Csa_007074 [Cucumis sativus]3.5e-1675Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S+NT+AQLCCNNHP+LG C+ GVDD  DGKCW HCI+GCEKGGFCK +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

TYK10190.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]1.9e-1779.17Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

TYK10191.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]1.4e-1776Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS

TYK10192.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]1.6e-1672.22Show/hide
Query:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM
        RSLNT+AQLCC NHP+ GAC PGVDD  DG+CW  CI GCEKGGFCK+VG  H+
Subjt:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ9 Uncharacterized protein1.3e-1669.81Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM
        S+NT+AQLCCNNH +LG+C PGVDD  DGKCW HCI GCE+GGFCK++  GH+
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM

A0A0A0LYL5 Uncharacterized protein5.8e-1760Show/hide
Query:  GDMVWLVYHV-----RRSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM
        G + W+V+ V       SLNT+AQLCC NHP+ GACKPGVDD  DG+CW  CI GCEKGG CK+VG  H+
Subjt:  GDMVWLVYHV-----RRSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM

A0A5D3CEJ1 Putative defensin-like protein 206.9e-1876Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS

A0A5D3CFQ3 Putative defensin-like protein 209.0e-1879.17Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

A0A5D3CG20 Putative defensin-like protein 207.6e-1772.22Show/hide
Query:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM
        RSLNT+AQLCC NHP+ GAC PGVDD  DG+CW  CI GCEKGGFCK+VG  H+
Subjt:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHM

SwissProt top hitse value%identityAlignment
P0CAX9 Defensin-like protein 211.8e-1052.08Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHM
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H+
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHM

Q2V2S1 Putative defensin-like protein 202.4e-1238.27Show/hide
Query:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHM
        + + +SF +F  +V  +     H+   +     +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H+
Subjt:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHM

Q2V391 Defensin-like protein 221.2e-0641.51Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG

Q2V392 Putative defensin-like protein 253.2e-0437.74Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG
        ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  G
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG

Arabidopsis top hitse value%identityAlignment
AT4G14276.1 Defensin-like (DEFL) family protein1.2e-1152.08Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHM
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H+
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHM

AT5G08055.1 Defensin-like (DEFL) family protein2.3e-0537.74Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG
        ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  G
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG

AT5G08315.1 Defensin-like (DEFL) family protein8.4e-0841.51Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG

AT5G39645.1 Defensin-like (DEFL) family protein3.3e-0430.36Show/hide
Query:  KDDTLSFPMFGDMVWLV--------YHVRRSLNTSAQLCCNNHPQLGACKPGVDDQ
        K + +SF +F  +V  +         H+   ++    +CC  HP LG C PG+DD+
Subjt:  KDDTLSFPMFGDMVWLV--------YHVRRSLNTSAQLCCNNHPQLGACKPGVDDQ

AT5G52605.1 Defensin-like (DEFL) family protein1.7e-1338.27Show/hide
Query:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHM
        + + +SF +F  +V  +     H+   +     +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H+
Subjt:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGTGGCCATGGTGTTGGAGCTCTTTCAAACACAAAGGATGACACACTTAGCTTCCCAATGTTTGGGGATATGGTTTGGTTGGTCTACCATGTCAGACGAAGTTT
GAATACGAGTGCTCAATTGTGTTGCAACAACCATCCTCAACTTGGTGCATGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCT
GTGAAAAAGGAGGATTCTGCAAACAAGTTGGGAGTGGTCATATGACTGTCTATGTCTCTCTAGGTGTTTACACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTGGCCATGGTGTTGGAGCTCTTTCAAACACAAAGGATGACACACTTAGCTTCCCAATGTTTGGGGATATGGTTTGGTTGGTCTACCATGTCAGACGAAGTTT
GAATACGAGTGCTCAATTGTGTTGCAACAACCATCCTCAACTTGGTGCATGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCT
GTGAAAAAGGAGGATTCTGCAAACAAGTTGGGAGTGGTCATATGACTGTCTATGTCTCTCTAGGTGTTTACACATGA
Protein sequenceShow/hide protein sequence
MNCGHGVGALSNTKDDTLSFPMFGDMVWLVYHVRRSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHMTVYVSLGVYT