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Lsi06G001420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like family protein, putative
Genome locationchr06:1420636..1429095
RNA-Seq ExpressionLsi06G001420
SyntenyLsi06G001420
Gene Ontology termsGO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR022618 - Defensin-like protein 20-27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66133.1 hypothetical protein Csa_007601 [Cucumis sativus]8.2e-1671.15Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH
        S+NT+AQLCCNNH +LG+C PGVDD  DGKCW HCI GCE+GGFCK++  GH
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH

KGN66136.1 hypothetical protein Csa_007074 [Cucumis sativus]6.3e-1675Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S+NT+AQLCCNNHP+LG C+ GVDD  DGKCW HCI+GCEKGGFCK +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

TYK10190.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]3.3e-1779.17Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

TYK10191.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]3.3e-1776Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS

TYK10192.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]4.8e-1673.58Show/hide
Query:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH
        RSLNT+AQLCC NHP+ GAC PGVDD  DG+CW  CI GCEKGGFCK+VG  H
Subjt:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH

TrEMBL top hitse value%identityAlignment
A0A0A0LYL5 Uncharacterized protein1.4e-1660.87Show/hide
Query:  GDMVWLVYHV-----RRSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH
        G + W+V+ V       SLNT+AQLCC NHP+ GACKPGVDD  DG+CW  CI GCEKGG CK+VG  H
Subjt:  GDMVWLVYHV-----RRSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH

A0A0A0M1N0 Uncharacterized protein3.0e-1675Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S+NT+AQLCCNNHP+LG C+ GVDD  DGKCW HCI+GCEKGGFCK +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

A0A5D3CEJ1 Putative defensin-like protein 201.6e-1776Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS

A0A5D3CFQ3 Putative defensin-like protein 201.6e-1779.17Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

A0A5D3CG20 Putative defensin-like protein 202.3e-1673.58Show/hide
Query:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH
        RSLNT+AQLCC NHP+ GAC PGVDD  DG+CW  CI GCEKGGFCK+VG  H
Subjt:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGH

SwissProt top hitse value%identityAlignment
P0CAX9 Defensin-like protein 213.1e-1050Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHQLNQNQS
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H  + N S
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHQLNQNQS

Q2V2S1 Putative defensin-like protein 205.7e-1237.93Show/hide
Query:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHQLNQNQS
        + + +SF +F  +V  +     H+   +     +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H  + N S
Subjt:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHQLNQNQS

Q2V391 Defensin-like protein 221.2e-0641.82Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSGHQ
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G Q
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSGHQ

Q2V392 Putative defensin-like protein 257.5e-0437.74Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG
        ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  G
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG

Arabidopsis top hitse value%identityAlignment
AT4G14276.1 Defensin-like (DEFL) family protein2.2e-1150Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHQLNQNQS
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H  + N S
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHQLNQNQS

AT5G08055.1 Defensin-like (DEFL) family protein5.3e-0537.74Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG
        ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  G
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG

AT5G08315.1 Defensin-like (DEFL) family protein8.8e-0841.82Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSGHQ
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G Q
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSGHQ

AT5G39645.1 Defensin-like (DEFL) family protein4.5e-0430.36Show/hide
Query:  KDDTLSFPMFGDMVWLV--------YHVRRSLNTSAQLCCNNHPQLGACKPGVDDQ
        K + +SF +F  +V  +         H+   ++    +CC  HP LG C PG+DD+
Subjt:  KDDTLSFPMFGDMVWLV--------YHVRRSLNTSAQLCCNNHPQLGACKPGVDDQ

AT5G52605.1 Defensin-like (DEFL) family protein4.1e-1337.93Show/hide
Query:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHQLNQNQS
        + + +SF +F  +V  +     H+   +     +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H  + N S
Subjt:  KDDTLSFPMFGDMVWLVY----HVRRSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHQLNQNQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGTGGCCATGGTGTTGGAGCTCTTTCAAACACAAAGGATGACACACTTAGCTTCCCAATGTTTGGGGATATGGTTTGGTTGGTCTACCATGTCAGACGAAGTTT
GAATACGAGTGCTCAATTGTGTTGCAACAACCATCCTCAACTTGGTGCATGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCT
GTGAAAAAGGAGGATTCTGCAAACAAGTTGGGAGTGGTCATCAACTCAATCAAAATCAAAGCAAACTTATTGCAACTACATCAACAATCGGAGGAAATTTACTAGTGTCC
TACCTACTAACGCTAATAAGGTTGAAAGAAGGATGCATCGAGCAAGCAATGCGACCTCCGATTCTACTTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTGGCCATGGTGTTGGAGCTCTTTCAAACACAAAGGATGACACACTTAGCTTCCCAATGTTTGGGGATATGGTTTGGTTGGTCTACCATGTCAGACGAAGTTT
GAATACGAGTGCTCAATTGTGTTGCAACAACCATCCTCAACTTGGTGCATGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCT
GTGAAAAAGGAGGATTCTGCAAACAAGTTGGGAGTGGTCATCAACTCAATCAAAATCAAAGCAAACTTATTGCAACTACATCAACAATCGGAGGAAATTTACTAGTGTCC
TACCTACTAACGCTAATAAGGTTGAAAGAAGGATGCATCGAGCAAGCAATGCGACCTCCGATTCTACTTAACTAA
Protein sequenceShow/hide protein sequence
MNCGHGVGALSNTKDDTLSFPMFGDMVWLVYHVRRSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHQLNQNQSKLIATTSTIGGNLLVS
YLLTLIRLKEGCIEQAMRPPILLN