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Lsi06G001440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like family protein, putative
Genome locationchr06:1429721..1448946
RNA-Seq ExpressionLsi06G001440
SyntenyLsi06G001440
Gene Ontology termsGO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR022618 - Defensin-like protein 20-27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66133.1 hypothetical protein Csa_007601 [Cucumis sativus]8.7e-1572.92Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S+NT+AQLCCNNH +LG+C PGVDD  DGKCW HCI GCE+GGFCK++
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

KGN66136.1 hypothetical protein Csa_007074 [Cucumis sativus]6.1e-1675Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S+NT+AQLCCNNHP+LG C+ GVDD  DGKCW HCI+GCEKGGFCK +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

TYK10190.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]3.2e-1767.21Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSATQSKSKQTYC
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+   T       YC
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSATQSKSKQTYC

TYK10191.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]3.2e-1776Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS

TYK10192.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]1.8e-1576Show/hide
Query:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVG
        RSLNT+AQLCC NHP+ GAC PGVDD  DG+CW  CI GCEKGGFCK+VG
Subjt:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVG

TrEMBL top hitse value%identityAlignment
A0A0A0LYL5 Uncharacterized protein2.5e-1575.51Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVG
        SLNT+AQLCC NHP+ GACKPGVDD  DG+CW  CI GCEKGG CK+VG
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVG

A0A0A0M1N0 Uncharacterized protein2.9e-1675Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV
        S+NT+AQLCCNNHP+LG C+ GVDD  DGKCW HCI+GCEKGGFCK +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQV

A0A5D3CEJ1 Putative defensin-like protein 201.6e-1776Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+ +
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGS

A0A5D3CFQ3 Putative defensin-like protein 201.6e-1767.21Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSATQSKSKQTYC
        S NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+   T       YC
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSATQSKSKQTYC

A0A5D3CG20 Putative defensin-like protein 208.5e-1676Show/hide
Query:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVG
        RSLNT+AQLCC NHP+ GAC PGVDD  DG+CW  CI GCEKGGFCK+VG
Subjt:  RSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVG

SwissProt top hitse value%identityAlignment
P0CAX9 Defensin-like protein 211.1e-0954.55Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVG
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVG

Q2V2S1 Putative defensin-like protein 202.3e-1060.98Show/hide
Query:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCK
        +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK
Subjt:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCK

Q2V391 Defensin-like protein 225.9e-0640Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSATQ
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +    Q
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSATQ

Arabidopsis top hitse value%identityAlignment
AT4G14276.1 Defensin-like (DEFL) family protein8.2e-1154.55Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVG
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVG

AT5G08055.1 Defensin-like (DEFL) family protein1.9e-0439.58Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCK
        ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCK

AT5G08315.1 Defensin-like (DEFL) family protein4.2e-0740Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSATQ
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +    Q
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSATQ

AT5G52605.1 Defensin-like (DEFL) family protein1.6e-1160.98Show/hide
Query:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCK
        +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK
Subjt:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGAGTTTGAATACAAGTGCTCAATTGTGTTGCAACAACCATCCTCAACTTGGTGCCTGCAAGCCTGGAGTAGATGATCAAGGAGATGGGAAGTGTTGGACTCA
TTGTATTTCTGGCTGCGAAAAAGGAGGATTCTGCAAACAAGTTGGGAGTGCAACTCAATCAAAATCAAAGCAAACTTATTGCAACTACATCAACAATCGGAGGAAATTTA
CTAGTGTCCTACCTACTAACGCTAATAAGGTTGAAAGAAGGATGCATCGAGCAAGCAATGCGACCTCCGATTCTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGAGTTTGAATACAAGTGCTCAATTGTGTTGCAACAACCATCCTCAACTTGGTGCCTGCAAGCCTGGAGTAGATGATCAAGGAGATGGGAAGTGTTGGACTCA
TTGTATTTCTGGCTGCGAAAAAGGAGGATTCTGCAAACAAGTTGGGAGTGCAACTCAATCAAAATCAAAGCAAACTTATTGCAACTACATCAACAATCGGAGGAAATTTA
CTAGTGTCCTACCTACTAACGCTAATAAGGTTGAAAGAAGGATGCATCGAGCAAGCAATGCGACCTCCGATTCTACTTAA
Protein sequenceShow/hide protein sequence
MERSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSATQSKSKQTYCNYINNRRKFTSVLPTNANKVERRMHRASNATSDST