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Lsi06G001450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDefensin-like protein 21
Genome locationchr06:1512079..1517001
RNA-Seq ExpressionLsi06G001450
SyntenyLsi06G001450
Gene Ontology termsGO:0050832 - defense response to fungus (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR022618 - Defensin-like protein 20-27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3485179.1 defensin-like protein 21 [Gossypium australe]7.9e-2142.75Show/hide
Query:  CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFC-KQVGNGS------------LNTSAQL----------------CCNNHPQLGACKPGVDD-
        CCNNHP+LG C PG DD    DGKCW +CI+ CE+G    KQ+   S            +N++  +                CCNNHP+LG C PG DD 
Subjt:  CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFC-KQVGNGS------------LNTSAQL----------------CCNNHPQLGACKPGVDD-

Query:  -QGDGKCWTHCISGCEKGGFCKQVGSGHVFC
           DGKCW +CI+ CE+GG CK +  GH  C
Subjt:  -QGDGKCWTHCISGCEKGGFCKQVGSGHVFC

KAE8653392.1 hypothetical protein Csa_007412 [Cucumis sativus]9.0e-3360.18Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQ
        SLNT+AQLCC NHP+ GACKPGVDD  DG+CW  CI GCEK         G+LN +A +CCNN+P LG+CKPGVDD  Q +GKCW  C SGC KGGFCK+
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQ

Query:  VGSG-----HVFC
        VG       H +C
Subjt:  VGSG-----HVFC

KAF9837361.1 hypothetical protein H0E87_001137 [Populus deltoides]1.6e-1848.98Show/hide
Query:  NTSAQ-LCCNNHPQLGACKPGVDDQG-DGKCWTHCISGCEKGGFCKQVGNGSLNTSAQ-LCCNNHPQLGACKPGVDDQG-DGKCWTHCISGCE--KGG
        N +AQ  CC  HP+LG C+PGVDD+  DGKCW +C++ C+     +  G+   N +AQ  CC  HP+LG C+PGVDD+  DGKCW +C++ C+  KGG
Subjt:  NTSAQ-LCCNNHPQLGACKPGVDDQG-DGKCWTHCISGCEKGGFCKQVGNGSLNTSAQ-LCCNNHPQLGACKPGVDDQG-DGKCWTHCISGCE--KGG

TYK10190.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]4.8e-1872.73Show/hide
Query:  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV
        +GS NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+   +V
Subjt:  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV

TYK10191.1 putative defensin-like protein 20 [Cucumis melo var. makuwa]1.4e-3363.55Show/hide
Query:  SLN-TSAQLCCNNHPQLGACKPGVDDQ--GDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCK
        SLN  +AQ+CCNNHP LG CKPGVDD   G+GKCW+ CISG  K            NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCK
Subjt:  SLN-TSAQLCCNNHPQLGACKPGVDDQ--GDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCK

Query:  QVGSGHV
        Q+ + +V
Subjt:  QVGSGHV

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ9 Uncharacterized protein2.6e-1772.22Show/hide
Query:  GSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV
        GS+NT+AQLCCNNH +LG+C PGVDD  DGKCW HCI GCE+GGFCK++  GHV
Subjt:  GSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV

A0A0A0M1N0 Uncharacterized protein2.6e-1769.09Show/hide
Query:  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV
        +GS+NT+AQLCCNNHP+LG C+ GVDD  DGKCW HCI+GCEKGGFCK +   +V
Subjt:  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV

A0A5B6WTE5 Defensin-like protein 213.8e-2142.75Show/hide
Query:  CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFC-KQVGNGS------------LNTSAQL----------------CCNNHPQLGACKPGVDD-
        CCNNHP+LG C PG DD    DGKCW +CI+ CE+G    KQ+   S            +N++  +                CCNNHP+LG C PG DD 
Subjt:  CCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFC-KQVGNGS------------LNTSAQL----------------CCNNHPQLGACKPGVDD-

Query:  -QGDGKCWTHCISGCEKGGFCKQVGSGHVFC
           DGKCW +CI+ CE+GG CK +  GH  C
Subjt:  -QGDGKCWTHCISGCEKGGFCKQVGSGHVFC

A0A5D3CEJ1 Putative defensin-like protein 206.7e-3463.55Show/hide
Query:  SLN-TSAQLCCNNHPQLGACKPGVDDQ--GDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCK
        SLN  +AQ+CCNNHP LG CKPGVDD   G+GKCW+ CISG  K            NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCK
Subjt:  SLN-TSAQLCCNNHPQLGACKPGVDDQ--GDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCK

Query:  QVGSGHV
        Q+ + +V
Subjt:  QVGSGHV

A0A5D3CFQ3 Putative defensin-like protein 202.3e-1872.73Show/hide
Query:  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV
        +GS NT+AQLCCNNHP+LG+C+PGVDD  DGKCW HCI+GCEKGGFCKQ+   +V
Subjt:  NGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHV

SwissProt top hitse value%identityAlignment
P0CAX9 Defensin-like protein 211.3e-1052.08Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHV
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H+
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHV

Q2V2S1 Putative defensin-like protein 207.7e-1154.17Show/hide
Query:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHV
        +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H+
Subjt:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHV

Q2V391 Defensin-like protein 226.7e-0740Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG---HVFC
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G   H +C
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG---HVFC

Q2V392 Putative defensin-like protein 251.1e-0435.29Show/hide
Query:  FCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG---HVFC
        F   V   ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  G   H +C
Subjt:  FCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG---HVFC

Arabidopsis top hitse value%identityAlignment
AT4G14276.1 Defensin-like (DEFL) family protein9.3e-1252.08Show/hide
Query:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHV
        +CC  HP +G C P +DD  +  GKCW  CI GCE GGFCK  G  H+
Subjt:  LCCNNHPQLGACKPGVDDQGD--GKCWTHCISGCEKGGFCKQVGSGHV

AT5G08055.1 Defensin-like (DEFL) family protein7.6e-0635.29Show/hide
Query:  FCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG---HVFC
        F   V   ++ +   LCCNNHP+ G C    D+Q   +C   C +GC   KG +CK +  G   H +C
Subjt:  FCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGC--EKGGFCKQVGSG---HVFC

AT5G08315.1 Defensin-like (DEFL) family protein4.8e-0840Show/hide
Query:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG---HVFC
        ++     LCCNNHP+ G C    DDQ   +C + C++GC+  KGG+CK +  G   H +C
Subjt:  SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCE--KGGFCKQVGSG---HVFC

AT5G52605.1 Defensin-like (DEFL) family protein5.5e-1254.17Show/hide
Query:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHV
        +CC  HP +G C PG+DD  + DGKCW  CI GCE GGFCK     H+
Subjt:  LCCNNHPQLGACKPGVDD--QGDGKCWTHCISGCEKGGFCKQVGSGHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTTTGAATACAAGTGCTCAATTATGCTGCAACAACCATCCTCAACTTGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTC
TGGCTGTGAAAAAGGAGGATTCTGTAAACAAGTTGGGAATGGAAGTTTGAATACAAGTGCTCAATTGTGCTGCAACAACCATCCTCAACTAGGTGCCTGCAAGCCTGGAG
TAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTTTGCAAACAAGTTGGGAGTGGCCACGTTTTTTGCCTCAAGACTTTG
CATGACATGCACCTCACGACGTTATTTGTTATACATTGTATCCCC
mRNA sequenceShow/hide mRNA sequence
AGTTTGAATACAAGTGCTCAATTATGCTGCAACAACCATCCTCAACTTGGTGCCTGCAAGCCTGGAGTAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTC
TGGCTGTGAAAAAGGAGGATTCTGTAAACAAGTTGGGAATGGAAGTTTGAATACAAGTGCTCAATTGTGCTGCAACAACCATCCTCAACTAGGTGCCTGCAAGCCTGGAG
TAGATGATCAGGGAGATGGGAAGTGTTGGACTCATTGCATTTCTGGCTGTGAAAAAGGAGGATTTTGCAAACAAGTTGGGAGTGGCCACGTTTTTTGCCTCAAGACTTTG
CATGACATGCACCTCACGACGTTATTTGTTATACATTGTATCCCC
Protein sequenceShow/hide protein sequence
SLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGNGSLNTSAQLCCNNHPQLGACKPGVDDQGDGKCWTHCISGCEKGGFCKQVGSGHVFCLKTL
HDMHLTTLFVIHCIP