; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G001800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionvesicle-associated protein 2-2-like
Genome locationchr06:1944340..1975197
RNA-Seq ExpressionLsi06G001800
SyntenyLsi06G001800
Gene Ontology termsNA
InterPro domainsIPR000535 - Major sperm protein (MSP) domain
IPR008962 - PapD-like superfamily
IPR013783 - Immunoglobulin-like fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450732.1 PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]9.3e-0637.7Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE--------------------------------------------FGKN-NSKNIEERKLGTIIIVRPSKSPTVE
        +VKTT  +KY V PN GII PLS C+                                            F KN N  NIEERKL TI++   + S T+E
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE--------------------------------------------FGKN-NSKNIEERKLGTIIIVRPSKSPTVE

Query:  A--VGVSEQSNVKQIEELKTQL
        A  VGVS QS  KQIEELK ++
Subjt:  A--VGVSEQSNVKQIEELKTQL

XP_023545322.1 vesicle-associated protein 2-2-like [Cucurbita pepo subsp. pepo]1.6e-0534.78Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVE--A
        +VKTT  +KY V PNMGII+PLS+CE                                          FGK+ SKNIEE KL TII++ P+  P  +  A
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVE--A

Query:  VGVSEQSNVKQIEELKTQLEHDSFKELNMKLSNSFAEI
        + V +QSN +Q+EELK ++      +L +KL  +   I
Subjt:  VGVSEQSNVKQIEELKTQLEHDSFKELNMKLSNSFAEI

XP_031736025.1 vesicle-associated protein 1-3-like [Cucumis sativus]2.9e-0737.59Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE--------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEA
        +VKTT  QKY V PN G+I PLS CE                                            F KN SKNIEER+LGTI++   S SPT+E 
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE--------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEA

Query:  --VGVSEQSNVKQIEELKTQLEHDSFKELNMKL
          V VS QS   +IEELK ++      EL+ KL
Subjt:  --VGVSEQSNVKQIEELKTQLEHDSFKELNMKL

XP_031736065.1 vesicle-associated protein 2-1-like [Cucumis sativus]7.6e-0839.02Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE---------------------------------------------FGKNNSK-NIEERKLGTIIIVRPSKSPTV
        +VKTT  QKY+V PN+GII PLS CE                                             F KN SK NIEER+L TI++   S SPT+
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE---------------------------------------------FGKNNSK-NIEERKLGTIIIVRPSKSPTV

Query:  EA--VGVSEQSNVKQIEELKTQL
        E   VGVS QS  K+IEELK ++
Subjt:  EA--VGVSEQSNVKQIEELKTQL

XP_038878617.1 LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]5.5e-0640.91Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEA--
        +VKTT  +K  V PN GII+PLS CE                                          FGK+NSKNIEER L T I+V PS S TVEA  
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEA--

Query:  VGVSEQSNV-KQIEELKTQLEHDSFKELNMKL
        VGVS +S+  KQIEELK ++      EL+ KL
Subjt:  VGVSEQSNV-KQIEELKTQLEHDSFKELNMKL

TrEMBL top hitse value%identityAlignment
A0A1S3BPU6 vesicle-associated protein 1-3-like4.5e-0637.7Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE--------------------------------------------FGKN-NSKNIEERKLGTIIIVRPSKSPTVE
        +VKTT  +KY V PN GII PLS C+                                            F KN N  NIEERKL TI++   + S T+E
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE--------------------------------------------FGKN-NSKNIEERKLGTIIIVRPSKSPTVE

Query:  A--VGVSEQSNVKQIEELKTQL
        A  VGVS QS  KQIEELK ++
Subjt:  A--VGVSEQSNVKQIEELKTQL

A0A6A4LET9 MSP domain-containing protein (Fragment)2.5e-0437.65Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGVSEQ
        QVKTT P+KY V PN GII+P S C+                       F K+N KNIEE KL  ++I  P     +++ GV++Q
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGVSEQ

A0A6J1HCB9 vesicle-associated protein 2-2-like5.0e-0534.06Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTC------------------------------------------EFGKNNSKNIEERKLGTIIIVRPSKSPTVE--A
        +VKTT  +KY V PNMGII+PLS+C                                           FGK+ SKNIEE KL TII++ P+  P  +  A
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTC------------------------------------------EFGKNNSKNIEERKLGTIIIVRPSKSPTVE--A

Query:  VGVSEQSNVKQIEELKTQLEHDSFKELNMKLSNSFAEI
        + V +QSN +Q+EELK ++      +L +KL  +   I
Subjt:  VGVSEQSNVKQIEELKTQLEHDSFKELNMKLSNSFAEI

A0A6J1HZ48 vesicle-associated protein 2-2-like1.0e-0534.51Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVE---
        +VKTT  +KY V PNMGII+PL++CE                                          FGK+ SKNIEE KL TII+     SP VE   
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE------------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVE---

Query:  ---AVGVSEQSNVKQIEELKTQLEHDSFKELNMKLSNSFAEI
           A+ V +QSN +Q+EELK ++      +L +KL  +   I
Subjt:  ---AVGVSEQSNVKQIEELKTQLEHDSFKELNMKLSNSFAEI

SwissProt top hitse value%identityAlignment
B9DHD7 Vesicle-associated protein 2-25.3e-0429.17Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGV
        +VKTT P+KY V PN+G++ P STCE                                         F K   K+IEE KL  + +V PS SP +  +  
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGV

Query:  SEQSNVKQIEELKTQLEHDS
         +Q  V +   LK +L   S
Subjt:  SEQSNVKQIEELKTQLEHDS

Arabidopsis top hitse value%identityAlignment
AT1G08820.1 vamp/synaptobrevin-associated protein 27-23.8e-0529.17Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGV
        +VKTT P+KY V PN+G++ P STCE                                         F K   K+IEE KL  + +V PS SP +  +  
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGV

Query:  SEQSNVKQIEELKTQLEHDS
         +Q  V +   LK +L   S
Subjt:  SEQSNVKQIEELKTQLEHDS

AT1G08820.2 vamp/synaptobrevin-associated protein 27-23.8e-0529.17Show/hide
Query:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGV
        +VKTT P+KY V PN+G++ P STCE                                         F K   K+IEE KL  + +V PS SP +  +  
Subjt:  QVKTTQPQKYFVGPNMGIIEPLSTCE-----------------------------------------FGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGV

Query:  SEQSNVKQIEELKTQLEHDS
         +Q  V +   LK +L   S
Subjt:  SEQSNVKQIEELKTQLEHDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTTAAGACCACACAACCTCAAAAATACTTTGTAGGACCAAATATGGGCATCATCGAGCCATTATCCACTTGTGAATTTGGAAAAAATAATAGCAAGAACATAGA
AGAAAGGAAATTGGGTACAATAATTATTGTTAGGCCATCTAAATCCCCAACTGTTGAAGCTGTTGGAGTTTCAGAACAAAGTAATGTTAAGCAAATAGAAGAATTGAAAA
CTCAGCTAGAACATGATTCTTTCAAAGAATTGAACATGAAACTAAGCAACTCTTTTGCTGAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGTTAAGACCACACAACCTCAAAAATACTTTGTAGGACCAAATATGGGCATCATCGAGCCATTATCCACTTGTGAATTTGGAAAAAATAATAGCAAGAACATAGA
AGAAAGGAAATTGGGTACAATAATTATTGTTAGGCCATCTAAATCCCCAACTGTTGAAGCTGTTGGAGTTTCAGAACAAAGTAATGTTAAGCAAATAGAAGAATTGAAAA
CTCAGCTAGAACATGATTCTTTCAAAGAATTGAACATGAAACTAAGCAACTCTTTTGCTGAGATTTGA
Protein sequenceShow/hide protein sequence
MQVKTTQPQKYFVGPNMGIIEPLSTCEFGKNNSKNIEERKLGTIIIVRPSKSPTVEAVGVSEQSNVKQIEELKTQLEHDSFKELNMKLSNSFAEI