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Lsi06G001810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionvesicle-associated protein 2-2-like
Genome locationchr06:1950058..1961240
RNA-Seq ExpressionLsi06G001810
SyntenyLsi06G001810
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
InterPro domainsIPR008962 - PapD-like superfamily
IPR013783 - Immunoglobulin-like fold
IPR016763 - Vesicle-associated membrane-protein-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450732.1 PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]3.3e-3573.64Show/hide
Query:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL
        TMQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ ILV+ S +S TIEAL VGVS QS DKQIEELKLKITQLD KL
Subjt:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL

Query:  HEAEIAISKLQEEKTRIPKAKSLQKNCLL
        HEAEI+ISKL+EEK RI K KS QKNCL+
Subjt:  HEAEIAISKLQEEKTRIPKAKSLQKNCLL

XP_022968793.1 vesicle-associated protein 2-2-like [Cucurbita maxima]2.9e-3159.35Show/hide
Query:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAE
        T QAQ +AP DM+CKDKFLIQST+VPIET ++DI S  +FG++ SKNIEE KL  I+V P+  P  + + + V +QSND+Q+EELKLKIT+L++KLHEA 
Subjt:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAE

Query:  IAISKLQEEKTRIPKAKSLQKNC
        +AISKL++E+   PKAKS + NC
Subjt:  IAISKLQEEKTRIPKAKSLQKNC

XP_031736025.1 vesicle-associated protein 1-3-like [Cucumis sativus]3.6e-3469.53Show/hide
Query:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQNNSKNIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLH
        TMQAQK+APPDM CKDKFLIQSTIVP E  L ED+ S   LF +N SKNIEE++L  ILV+  S+SPTIE LRV VS QS D +IEELKLKIT+LD KLH
Subjt:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQNNSKNIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLH

Query:  EAEIAISKLQEEKTRIPKAKSLQKNCLL
        EAEI+ISKL+E+K RI K KS QKNC++
Subjt:  EAEIAISKLQEEKTRIPKAKSLQKNCLL

XP_031736065.1 vesicle-associated protein 2-1-like [Cucumis sativus]3.3e-3570.23Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDL
        +TMQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ ILV+  SSSPTIE L VGVS QS DK+IEELKLKITQLD 
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDL

Query:  KLHEAEIAISKLQEEKTRIPKAKSLQKNCLL
        KLHEAEI+ISKL+EE+ RI K K  QKNCL+
Subjt:  KLHEAEIAISKLQEEKTRIPKAKSLQKNCLL

XP_038878617.1 LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]8.3e-3974.02Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVS-EQSNDKQIEELKLKITQLDLKLHE
        VTMQAQK+APPDM CKDKFLIQSTIVPIETT EDI S  LFG++NSKNIEE+ L  ILV PSSS T+EAL VGVS + S+DKQIEELKLKI +LD KLHE
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVS-EQSNDKQIEELKLKITQLDLKLHE

Query:  AEIAISKLQEEKTRIPKAKSLQKNCLL
        AEIAISKL+ +K  + K KS QKNCL+
Subjt:  AEIAISKLQEEKTRIPKAKSLQKNCLL

TrEMBL top hitse value%identityAlignment
A0A0A0LWK4 Uncharacterized protein4.3e-2568.87Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL
        MQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ ILV+  SSSPTIE L VGVS QS DK+IEELKLKITQLD KL
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL

Query:  HEAEIA
        HE  ++
Subjt:  HEAEIA

A0A1S3BPU6 vesicle-associated protein 1-3-like1.6e-3573.64Show/hide
Query:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL
        TMQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ ILV+ S +S TIEAL VGVS QS DKQIEELKLKITQLD KL
Subjt:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL

Query:  HEAEIAISKLQEEKTRIPKAKSLQKNCLL
        HEAEI+ISKL+EEK RI K KS QKNCL+
Subjt:  HEAEIAISKLQEEKTRIPKAKSLQKNCLL

A0A6J1DM49 vesicle-associated protein 2-2-like7.6e-3060.9Show/hide
Query:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSS-SPTIEALR-----VGVSEQSN--DKQIEELKLKITQL
        TMQ Q +APPDMICKDKFLI STIVP ETT+EDI S+ LFG++  K IE+KKL   LVR S+ SP  EAL      +GVS+  +  DK +E+LKL IT+L
Subjt:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSS-SPTIEALR-----VGVSEQSN--DKQIEELKLKITQL

Query:  DLKLHEAEIAISKLQEEKTRIPKAKSLQKNCLL
        +LKLHEA+ AI KL+EE+TRI + KSL+KNCL+
Subjt:  DLKLHEAEIAISKLQEEKTRIPKAKSLQKNCLL

A0A6J1HCB9 vesicle-associated protein 2-2-like9.0e-3159.35Show/hide
Query:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAE
        TMQAQ +AP DM+CKDKFLIQST+VP ETT++DI S  +FG++ SKNIEE KL  I+V P+  P  + + + V +QSND+Q+EELKLKIT+L++KLHEA 
Subjt:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAE

Query:  IAISKLQEEKTRIPKAKSLQKNC
        +AISKL++E+    KAKS + NC
Subjt:  IAISKLQEEKTRIPKAKSLQKNC

A0A6J1HZ48 vesicle-associated protein 2-2-like1.4e-3159.35Show/hide
Query:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAE
        T QAQ +AP DM+CKDKFLIQST+VPIET ++DI S  +FG++ SKNIEE KL  I+V P+  P  + + + V +QSND+Q+EELKLKIT+L++KLHEA 
Subjt:  TMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAE

Query:  IAISKLQEEKTRIPKAKSLQKNC
        +AISKL++E+   PKAKS + NC
Subjt:  IAISKLQEEKTRIPKAKSLQKNC

SwissProt top hitse value%identityAlignment
B9DHD7 Vesicle-associated protein 2-25.3e-1255.71Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL
        V MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS SP +  +
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL

Q84WW5 Vesicle-associated protein 1-31.7e-0735.54Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQI--------EELKLKIT
        VTMQAQK AP DM CKDKFL+Q+ +V   TT +++++  +F +   + IE+ KL ++ +  +  SP  E    G S  ++   I        +++     
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQI--------EELKLKIT

Query:  QLDLKLHEAEIAISKLQEEKT
        +   K  EA   ISKL EEKT
Subjt:  QLDLKLHEAEIAISKLQEEKT

Q8VZ95 Vesicle-associated protein 1-11.3e-0535.77Show/hide
Query:  MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRP--SSSPTIEALRVGVSEQ---SNDKQIEELKLKITQLD
        +VTMQAQK AP DM CKDKFL+Q  I     T +++    +F +     +EE KL +  V P    SP  E    G S +   S++    E   +   +D
Subjt:  MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRP--SSSPTIEALRVGVSEQ---SNDKQIEELKLKITQLD

Query:  LK------LHEAEIAISKLQEEK
         K        EA   I+KL EEK
Subjt:  LK------LHEAEIAISKLQEEK

Q9LVU1 Vesicle-associated protein 2-11.0e-0745.31Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS
        VT+QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS++
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS

Q9SHC8 Vesicle-associated protein 1-24.3e-0631.71Show/hide
Query:  MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTI--------EALRVGVSEQSNDKQIEEL-KLKI
        +VTMQAQK AP D+ CKDKFL+Q  +     T +D +++ +F +     +EE KL ++ V P   P+          + R  VS+  N        +   
Subjt:  MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTI--------EALRVGVSEQSNDKQIEEL-KLKI

Query:  TQLDLK--LHEAEIAISKLQEEK
         ++D +    EA   ++KL EEK
Subjt:  TQLDLK--LHEAEIAISKLQEEK

Arabidopsis top hitse value%identityAlignment
AT1G08820.1 vamp/synaptobrevin-associated protein 27-23.7e-1355.71Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL
        V MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS SP +  +
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL

AT1G08820.2 vamp/synaptobrevin-associated protein 27-23.7e-1355.71Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL
        V MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS SP +  +
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL

AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein1.2e-0835.54Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQI--------EELKLKIT
        VTMQAQK AP DM CKDKFL+Q+ +V   TT +++++  +F +   + IE+ KL ++ +  +  SP  E    G S  ++   I        +++     
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQI--------EELKLKIT

Query:  QLDLKLHEAEIAISKLQEEKT
        +   K  EA   ISKL EEKT
Subjt:  QLDLKLHEAEIAISKLQEEKT

AT5G47180.1 Plant VAMP (vesicle-associated membrane protein) family protein7.3e-0945.31Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS
        VT+QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS++
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS

AT5G47180.2 Plant VAMP (vesicle-associated membrane protein) family protein7.3e-0945.31Show/hide
Query:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS
        VT+QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS++
Subjt:  VTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACGATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAAT
TTCCAATGGTTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTG
GAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGCTGAAATTGCCATTTCAAAGCTACAAGAG
GAAAAAACTAGAATCCCAAAAGCCAAATCCTTGCAAAAGAATTGCTTACTTCGAAATAGCAACCCGAGCCTTTGGATGTCACGGTTTGTGGACCTAGAGGAATTAGCGTC
GTGGAAAATAGTATCAAAGCCAAAGGTTCGACCAAGCCATGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTACGATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAAT
TTCCAATGGTTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTG
GAGTTTCAGAACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGCTGAAATTGCCATTTCAAAGCTACAAGAG
GAAAAAACTAGAATCCCAAAAGCCAAATCCTTGCAAAAGAATTGCTTACTTCGAAATAGCAACCCGAGCCTTTGGATGTCACGGTTTGTGGACCTAGAGGAATTAGCGTC
GTGGAAAATAGTATCAAAGCCAAAGGTTCGACCAAGCCATGTCTAG
Protein sequenceShow/hide protein sequence
MVTMQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEAEIAISKLQE
EKTRIPKAKSLQKNCLLRNSNPSLWMSRFVDLEELASWKIVSKPKVRPSHV