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Lsi06G001900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSec-independent protein translocase protein TATA
Genome locationchr06:2058471..2064215
RNA-Seq ExpressionLsi06G001900
SyntenyLsi06G001900
Gene Ontology termsGO:0032594 - protein transport within lipid bilayer (biological process)
GO:0043953 - protein transport by the Tat complex (biological process)
GO:0051260 - protein homooligomerization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0033281 - TAT protein transport complex (cellular component)
InterPro domainsIPR003369 - Sec-independent protein translocase protein TatA/B/E
IPR006312 - Sec-independent protein translocase protein TatA/E


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588320.1 Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5885.53Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISSATLSFTSSIPRLPS SP FSSSKS+FF+NN TAN F   DH+HSSLL  TR R T DR+HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTS ++EE+QDLK  N
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN

KAG7020882.1 Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5885.53Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISS TLSFTSSIPRLPS SP FSSSKS+FFANN TAN F   DH+HSSLL  TR R T DR+HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTS ++EE+QDLK  N
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN

XP_022932561.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita moschata]6.4e-5885.53Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISSATLSFTSSIPRLPS SP FSSSKS+FFANNATAN F   DH+HS LL  TR R T DR+HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKP S ++EE+QDLK  N
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN

XP_022969040.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita maxima]9.9e-5986.18Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISSATLSFTSSIPRLPS SP  SSSKS+FFANNATAN F   DH+HSSLL  TR R T DR+HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTS ++EE+QDLK  N
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN

XP_023529222.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-5886.18Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISSATLSFTSSIPRLPS SP FSSSKS+FFANNATAN F   DH+HS LL  TR R T DR+HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTS ++EE+QDLK  N
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN

TrEMBL top hitse value%identityAlignment
A0A0A0LWL1 Uncharacterized protein5.9e-5784.08Show/hide
Query:  MVISSATLSFTSSIPRL-PSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
        MVISS TLSFTSSIP+L PSLSPSFSSSKSAFFANNAT +FFT  DHNHSSLL  T FRTTT  +HKG TCNALFGLGVPELVVIAGVAALVFGPKKLPE
Subjt:  MVISSATLSFTSSIPRL-PSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE

Query:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQNHHVT
        VGKSIGKTVKSFQQAAKEFESELKKEPE   ET+VEKPTS E EERQDLK  N   T
Subjt:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQNHHVT

A0A1S3BPB0 sec-independent protein translocase protein TATA, chloroplastic1.5e-5784.08Show/hide
Query:  MVISSATLSFTSSIPRL-PSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
        MVIS+ TLSFTSSIP+L PSLSPSFSSSKSAFFANNAT +FFTN DHNHSSLL  T FRTTT  +HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
Subjt:  MVISSATLSFTSSIPRL-PSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE

Query:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQNHHVT
        VGKSIGKTVKSFQQAAKEFESELKKEPE   ET+VEKPTS E E+RQDLK  N   T
Subjt:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQNHHVT

A0A5D3CIV6 Sec-independent protein translocase protein TATA4.5e-5781.1Show/hide
Query:  MVISSATLSFTSSIPRL-PSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
        MVIS+ TLSFTSSIP+L PSLSPSFSSSKSAFFANNAT +FFTN DHNHSSLL  T FRTTT  +HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
Subjt:  MVISSATLSFTSSIPRL-PSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE

Query:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLK---HQNHHVTFITF
        VGKSIGKTVKSFQQAAKEFESELKKEPE   ET+VEKPTS E E+RQDLK    ++H +  I+F
Subjt:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLK---HQNHHVTFITF

A0A6J1EWP2 sec-independent protein translocase protein TATA, chloroplastic3.1e-5885.53Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISSATLSFTSSIPRLPS SP FSSSKS+FFANNATAN F   DH+HS LL  TR R T DR+HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKP S ++EE+QDLK  N
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN

A0A6J1HYU6 sec-independent protein translocase protein TATA, chloroplastic4.8e-5986.18Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISSATLSFTSSIPRLPS SP  SSSKS+FFANNATAN F   DH+HSSLL  TR R T DR+HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTS ++EE+QDLK  N
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQN

SwissProt top hitse value%identityAlignment
Q31RR1 Sec-independent protein translocase protein TatA6.5e-1354.41Show/hide
Query:  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE----PESIGETAVEKP
        FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E    P +  E  VE P
Subjt:  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE----PESIGETAVEKP

Q75GK3 Sec-independent protein translocase protein TATA, chloroplastic5.5e-2062.77Show/hide
Query:  RSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPESIG-------ETAVEKPTSAEEEERQDLK
        R    + C  LFGLGVPELVVIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKE +  G       ETAV      +E E    K
Subjt:  RSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPESIG-------ETAVEKPTSAEEEERQDLK

Q9LKU2 Sec-independent protein translocase protein TATA, chloroplastic5.1e-2656.85Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        M  S ATL   SS P  P   P  SSS+S+FF     +N FT     ++  L     R   + + K LTCNALFGLGVPEL VIAGVAAL+FGPKKLPE+
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQ
        GKSIGKTVKSFQQAAKEFESELK EPE     + +  TS +EEE++
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQ

Q9XFJ8 Sec-independent protein translocase protein TATA, chloroplastic7.2e-2067.47Show/hide
Query:  LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP-ESIGETAVEKPTSAEEEERQDLK
        L C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKEP E   +     PT+    E + L+
Subjt:  LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP-ESIGETAVEKPTSAEEEERQDLK

Q9XH46 Sec-independent protein translocase protein TATA, chloroplastic5.1e-2655.24Show/hide
Query:  TLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGK
        TLS +SS     S+ P+   + S +    +  +F ++  +  S LL K R +T   R+ KG TCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+
Subjt:  TLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGK

Query:  TVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLK
        TVKSFQQAAKEFE+ELKKEP    E +V     A E+E+Q++K
Subjt:  TVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLK

Arabidopsis top hitse value%identityAlignment
AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf1063.7e-2756.85Show/hide
Query:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        M  S ATL   SS P  P   P  SSS+S+FF     +N FT     ++  L     R   + + K LTCNALFGLGVPEL VIAGVAAL+FGPKKLPE+
Subjt:  MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQ
        GKSIGKTVKSFQQAAKEFESELK EPE     + +  TS +EEE++
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQ

AT5G52440.1 Bacterial sec-independent translocation protein mttA/Hcf1062.3e-0532.03Show/hide
Query:  TLSFTSSIPRLPSLSPSFSSSKSAFFANNATANF--FTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSI
        T S   S P L S   +   + S++F+   ++ F  +    H   S+  K+       R    +   +LFG+G PE +VI  VA LVFGPK L EV +++
Subjt:  TLSFTSSIPRLPSLSPSFSSSKSAFFANNATANF--FTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSI

Query:  GKTVKSF-------QQAAKEFESELKKE
        GKT+++F       Q  +++F+S L++E
Subjt:  GKTVKSF-------QQAAKEFESELKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATCTCATCTGCAACTTTATCCTTCACTTCTTCCATTCCAAGGCTTCCTTCTCTTTCTCCTTCATTTTCCTCCTCTAAATCCGCCTTCTTCGCCAACAATGCCAC
CGCCAATTTCTTCACCAACTGCGACCATAACCATTCTTCGCTACTGTGTAAGACCAGGTTCAGAACCACCACCGATAGATCTCATAAGGGTCTGACTTGTAACGCTCTGT
TTGGGCTTGGAGTGCCTGAACTTGTTGTAATCGCCGGTGTTGCAGCTCTGGTTTTTGGCCCTAAGAAGTTGCCCGAAGTTGGGAAGAGTATTGGGAAAACGGTCAAGAGC
TTCCAACAGGCGGCTAAGGAGTTCGAGTCTGAGCTGAAGAAAGAACCCGAGTCAATCGGAGAGACTGCGGTAGAGAAGCCTACATCAGCAGAAGAAGAGGAGAGACAAGA
TTTGAAGCACCAAAACCATCATGTCACCTTCATCACATTCTTAACAGCCGCCGTCAACTCCTCCGCTGCCACCGCTACTACTGTCACACTTGCACGGATTGCTGAATCCA
ACTCCCCTGTTTCTTTTGCCATCCATTTTCAGGCTTTTTTGTATAACTCTACTTTTTCTCCTTTTTTTCTCCCAATTCCCACGTGCTCCTCTAAGAATCCGAGGATGAGG
CTTTAA
mRNA sequenceShow/hide mRNA sequence
CAAATCCCAAAACATTGAAGAACATGATTATTATAATTTGTACAATTCCCACGTGAAAATTGCATCCAAAAATTAAAAAAAAAAAAACCAAAATAAAATTAAACAAAATC
AGAAGCATCTCCAAACCGATAAAGATTTCCAATTTCCAATCAAAGATTTTTCTTTTCCCTCAACGACGGCGACCATGGTGATCTCATCTGCAACTTTATCCTTCACTTCT
TCCATTCCAAGGCTTCCTTCTCTTTCTCCTTCATTTTCCTCCTCTAAATCCGCCTTCTTCGCCAACAATGCCACCGCCAATTTCTTCACCAACTGCGACCATAACCATTC
TTCGCTACTGTGTAAGACCAGGTTCAGAACCACCACCGATAGATCTCATAAGGGTCTGACTTGTAACGCTCTGTTTGGGCTTGGAGTGCCTGAACTTGTTGTAATCGCCG
GTGTTGCAGCTCTGGTTTTTGGCCCTAAGAAGTTGCCCGAAGTTGGGAAGAGTATTGGGAAAACGGTCAAGAGCTTCCAACAGGCGGCTAAGGAGTTCGAGTCTGAGCTG
AAGAAAGAACCCGAGTCAATCGGAGAGACTGCGGTAGAGAAGCCTACATCAGCAGAAGAAGAGGAGAGACAAGATTTGAAGCACCAAAACCATCATGTCACCTTCATCAC
ATTCTTAACAGCCGCCGTCAACTCCTCCGCTGCCACCGCTACTACTGTCACACTTGCACGGATTGCTGAATCCAACTCCCCTGTTTCTTTTGCCATCCATTTTCAGGCTT
TTTTGTATAACTCTACTTTTTCTCCTTTTTTTCTCCCAATTCCCACGTGCTCCTCTAAGAATCCGAGGATGAGGCTTTAA
Protein sequenceShow/hide protein sequence
MVISSATLSFTSSIPRLPSLSPSFSSSKSAFFANNATANFFTNCDHNHSSLLCKTRFRTTTDRSHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKS
FQQAAKEFESELKKEPESIGETAVEKPTSAEEEERQDLKHQNHHVTFITFLTAAVNSSAATATTVTLARIAESNSPVSFAIHFQAFLYNSTFSPFFLPIPTCSSKNPRMR
L