; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G001930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA cytidine acetyltransferase
Genome locationchr06:2104207..2133833
RNA-Seq ExpressionLsi06G001930
SyntenyLsi06G001930
Gene Ontology termsGO:0034470 - ncRNA processing (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG0486174.1 hypothetical protein HPP92_008269 [Vanilla planifolia]9.1e-0726.86Show/hide
Query:  DIYCVVQIYFEGFTNM-----SRGAG---------YQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMRDQDTE
        DI CV+Q+  EG  +M     S  AG         ++  Q  Q +    LF     GA+I+ I      HPS  +  Y   ++NLLT Y+ G+++D   E
Subjt:  DIYCVVQIYFEGFTNM-----SRGAG---------YQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMRDQDTE

Query:  ELP-----ELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE
        E+      E++I                      L+  L    PEK+ Y+GV  G + D F  +    F+ L++ ++  + + G  TC ++R L+  D E
Subjt:  ELP-----ELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE

Query:  NAA-------RLIYQTFRERFIRSMVYFKDDLEISFTLRIAA
        N            YQ FR+RF R +      L+    + I A
Subjt:  NAA-------RLIYQTFRERFIRSMVYFKDDLEISFTLRIAA

TYK28170.1 hypothetical protein E5676_scaffold289G00850 [Cucumis melo var. makuwa]2.7e-1135.67Show/hide
Query:  QCEYSLFSLNLLTSYFNGEMRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE
        +CEY LFSLNLLTSYFNGEM++  +  LPELDIELVY LG                                                            
Subjt:  QCEYSLFSLNLLTSYFNGEMRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE

Query:  NAARLIYQTFRERFIRSMVYFKDDLEISFTLRIAAFVNDRKPDIEVSVRTQEQAVEE
                 FRERF+ SMVYFKDDLEI FTLR+  + N+R     V  R  +Q + E
Subjt:  NAARLIYQTFRERFIRSMVYFKDDLEISFTLRIAAFVNDRKPDIEVSVRTQEQAVEE

XP_004961099.1 RNA cytidine acetyltransferase 1 [Setaria italica]2.0e-0629.82Show/hide
Query:  DIYCVVQIYFEG-------FTNMSRG---AGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMR----DQDTE
        DI CV+Q+  EG         ++S G   +G Q P          +F +   GA+I+ I      HPS  +  Y   +++LLT Y+ G+M     D++TE
Subjt:  DIYCVVQIYFEG-------FTNMSRG---AGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMR----DQDTE

Query:  ELPELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE----N
        E PE+ I                      L+  L    PEK+ YLGV  G + + F  +   NF   +VG++Q   + G  TC ++R L   D E    N
Subjt:  ELPELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE----N

Query:  AARLI---YQTFRERFIR
            +   YQ FR+RF R
Subjt:  AARLI---YQTFRERFIR

XP_034220703.1 RNA cytidine acetyltransferase 1 isoform X1 [Prunus dulcis]1.6e-0625.97Show/hide
Query:  DIYCVVQIYFEG----------FTNMSRGAGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDTEE
        DI CV+Q+  EG           +N  +  G Q P          +F +   GA+I+ I +    HPS  +  Y   ++ LLT Y+ G+   + + D E+
Subjt:  DIYCVVQIYFEG----------FTNMSRGAGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDTEE

Query:  L-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NA
        +                       P  D+  L+  L    PEK+ Y+GV  G +LD F  +    F+  ++G +    + G  TC +++ LK  + E N 
Subjt:  L-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NA

Query:  ARLIYQTFRERFIRSMVYFKDDLEISFTLRI
         R  YQ FR RF+R + Y    ++    + I
Subjt:  ARLIYQTFRERFIRSMVYFKDDLEISFTLRI

XP_034220705.1 RNA cytidine acetyltransferase 1 isoform X3 [Prunus dulcis]1.6e-0625.97Show/hide
Query:  DIYCVVQIYFEG----------FTNMSRGAGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDTEE
        DI CV+Q+  EG           +N  +  G Q P          +F +   GA+I+ I +    HPS  +  Y   ++ LLT Y+ G+   + + D E+
Subjt:  DIYCVVQIYFEG----------FTNMSRGAGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDTEE

Query:  L-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NA
        +                       P  D+  L+  L    PEK+ Y+GV  G +LD F  +    F+  ++G +    + G  TC +++ LK  + E N 
Subjt:  L-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NA

Query:  ARLIYQTFRERFIRSMVYFKDDLEISFTLRI
         R  YQ FR RF+R + Y    ++    + I
Subjt:  ARLIYQTFRERFIRSMVYFKDDLEISFTLRI

TrEMBL top hitse value%identityAlignment
A0A4U6VB23 RNA cytidine acetyltransferase9.9e-0729.82Show/hide
Query:  DIYCVVQIYFEG-------FTNMSRG---AGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMR----DQDTE
        DI CV+Q+  EG         ++S G   +G Q P          +F +   GA+I+ I      HPS  +  Y   +++LLT Y+ G+M     D++TE
Subjt:  DIYCVVQIYFEG-------FTNMSRG---AGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMR----DQDTE

Query:  ELPELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE----N
        E PE+ I                      L+  L    PEK+ YLGV  G + + F  +   NF   +VG++Q   + G  TC ++R L   D E    N
Subjt:  ELPELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE----N

Query:  AARLI---YQTFRERFIR
            +   YQ FR+RF R
Subjt:  AARLI---YQTFRERFIR

A0A5D3DY49 tRNA_bind_2 domain-containing protein1.3e-1135.67Show/hide
Query:  QCEYSLFSLNLLTSYFNGEMRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE
        +CEY LFSLNLLTSYFNGEM++  +  LPELDIELVY LG                                                            
Subjt:  QCEYSLFSLNLLTSYFNGEMRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE

Query:  NAARLIYQTFRERFIRSMVYFKDDLEISFTLRIAAFVNDRKPDIEVSVRTQEQAVEE
                 FRERF+ SMVYFKDDLEI FTLR+  + N+R     V  R  +Q + E
Subjt:  NAARLIYQTFRERFIRSMVYFKDDLEISFTLRIAAFVNDRKPDIEVSVRTQEQAVEE

A0A5E4FVS8 RNA cytidine acetyltransferase7.5e-0725.97Show/hide
Query:  DIYCVVQIYFEG----------FTNMSRGAGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDTEE
        DI CV+Q+  EG           +N  +  G Q P          +F +   GA+I+ I +    HPS  +  Y   ++ LLT Y+ G+   + + D E+
Subjt:  DIYCVVQIYFEG----------FTNMSRGAGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDTEE

Query:  L-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NA
        +                       P  D+  L+  L    PEK+ Y+GV  G +LD F  +    F+  ++G +    + G  TC +++ LK  + E N 
Subjt:  L-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NA

Query:  ARLIYQTFRERFIRSMVYFKDDLEISFTLRI
         R  YQ FR RF+R + Y    ++    + I
Subjt:  ARLIYQTFRERFIRSMVYFKDDLEISFTLRI

K3Z3F4 RNA cytidine acetyltransferase9.9e-0729.82Show/hide
Query:  DIYCVVQIYFEG-------FTNMSRG---AGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMR----DQDTE
        DI CV+Q+  EG         ++S G   +G Q P          +F +   GA+I+ I      HPS  +  Y   +++LLT Y+ G+M     D++TE
Subjt:  DIYCVVQIYFEG-------FTNMSRG---AGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPS--QCEYSLFSLNLLTSYFNGEMR----DQDTE

Query:  ELPELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE----N
        E PE+ I                      L+  L    PEK+ YLGV  G + + F  +   NF   +VG++Q   + G  TC ++R L   D E    N
Subjt:  ELPELDI---------------------ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE----N

Query:  AARLI---YQTFRERFIR
            +   YQ FR+RF R
Subjt:  AARLI---YQTFRERFIR

M5W2P4 RNA cytidine acetyltransferase1.7e-0626.18Show/hide
Query:  DIYCVVQIYFEGFTNMSRGA------------GYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDT
        DI CV+Q+  EG   +SR +            G Q P          +F +   GA+I+ I +    HPS  +  Y   ++ LLT Y+ G+   + + D 
Subjt:  DIYCVVQIYFEGFTNMSRGA------------GYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGE---MRDQDT

Query:  EEL-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-
        E++                       P  D+  L+  L    PEK+ Y+GV  G +LD F  +    F+  ++G +    + G  TC +++ LK  + E 
Subjt:  EEL-----------------------PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-

Query:  NAARLIYQTFRERFIRSMVYFKDDLEISFTLRI
        N  R  YQ FR RF+R + Y    ++    + I
Subjt:  NAARLIYQTFRERFIRSMVYFKDDLEISFTLRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57940.1 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)1.2e-0424.14Show/hide
Query:  DIYCVVQIYFEGFTNMSRGAGYQYPQIHQHLLHLPLFQNQP---------------KGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGEMRDQDT
        DI CV+Q+  EG   +S  +  Q  +      H P     P                GA+I+ I      HP+  +  Y   ++ LLT YF G++     
Subjt:  DIYCVVQIYFEGFTNMSRGAGYQYPQIHQHLLHLPLFQNQP---------------KGAQIITIFSSSEEHPSQCE--YSLFSLNLLTSYFNGEMRDQDT

Query:  EELPELDIE----------------------------LVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEY
         E  ++D+E                            L+  L    PEK+ Y+GV  G +LD F  +   NF   +V ++    + G  TC +++ LK  
Subjt:  EELPELDIE----------------------------LVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEY

Query:  DTE
        + E
Subjt:  DTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCAGAAAATTGGCATCAAGATGGAATTGACATTTATTGTGTCGTTCAGATTTACTTTGAGGGGTTCACTAACATGTCTAGAGGAGCTGGTTACCAATATCC
CCAAATACACCAACATTTATTGCATCTGCCTTTATTCCAAAATCAACCAAAAGGAGCTCAAATAATTACTATATTTTCGTCATCTGAAGAACATCCTTCACAGTGTGAAT
ACTCATTGTTCTCATTGAACCTCTTAACCAGCTACTTTAACGGCGAAATGCGTGATCAAGACACAGAAGAGCTTCCAGAATTGGATATTGAGTTGGTTTATCAACTGGGA
GGGACAGACCCGGAAAAAATTGATTATTTGGGAGTGTACTGTGGAAACTCACTTGATTGGTTCAATTTGTATGAAAATCTCAATTTTATCCAATTATTTGTTGGAAGATT
ACAGGGAGATTTTATGGATGGTCCGGTGACTTGTTGTATGATACGAGGACTTAAAGAATATGATACAGAAAATGCTGCTCGTCTTATTTATCAAACATTTCGTGAAAGAT
TTATTCGCTCCATGGTTTACTTCAAAGATGATTTGGAGATTTCTTTCACTCTAAGAATTGCAGCTTTTGTGAATGATAGGAAGCCTGATATTGAGGTGAGCGTTCGCACA
CAGGAACAAGCAGTGGAGGAAGATTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTTCAGAAAATTGGCATCAAGATGGAATTGACATTTATTGTGTCGTTCAGATTTACTTTGAGGGGTTCACTAACATGTCTAGAGGAGCTGGTTACCAATATCC
CCAAATACACCAACATTTATTGCATCTGCCTTTATTCCAAAATCAACCAAAAGGAGCTCAAATAATTACTATATTTTCGTCATCTGAAGAACATCCTTCACAGTGTGAAT
ACTCATTGTTCTCATTGAACCTCTTAACCAGCTACTTTAACGGCGAAATGCGTGATCAAGACACAGAAGAGCTTCCAGAATTGGATATTGAGTTGGTTTATCAACTGGGA
GGGACAGACCCGGAAAAAATTGATTATTTGGGAGTGTACTGTGGAAACTCACTTGATTGGTTCAATTTGTATGAAAATCTCAATTTTATCCAATTATTTGTTGGAAGATT
ACAGGGAGATTTTATGGATGGTCCGGTGACTTGTTGTATGATACGAGGACTTAAAGAATATGATACAGAAAATGCTGCTCGTCTTATTTATCAAACATTTCGTGAAAGAT
TTATTCGCTCCATGGTTTACTTCAAAGATGATTTGGAGATTTCTTTCACTCTAAGAATTGCAGCTTTTGTGAATGATAGGAAGCCTGATATTGAGGTGAGCGTTCGCACA
CAGGAACAAGCAGTGGAGGAAGATTTTGTTTAG
Protein sequenceShow/hide protein sequence
MAPSENWHQDGIDIYCVVQIYFEGFTNMSRGAGYQYPQIHQHLLHLPLFQNQPKGAQIITIFSSSEEHPSQCEYSLFSLNLLTSYFNGEMRDQDTEELPELDIELVYQLG
GTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQTFRERFIRSMVYFKDDLEISFTLRIAAFVNDRKPDIEVSVRT
QEQAVEEDFV