CuGenDBv2

Gene ID	Lsi06G001940
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	kinesin-like protein KIFC3
Genome location	chr06:2134818..2135402
RNA-Seq Expression	Lsi06G001940
Synteny	Lsi06G001940
Gene Ontology terms	GO:0007018 - microtubule-based movement (biological process) GO:0030705 - cytoskeleton-dependent intracellular transport (biological process) GO:0005871 - kinesin complex (cellular component) GO:0005874 - microtubule (cellular component) GO:0005524 - ATP binding (molecular function) GO:0008017 - microtubule binding (molecular function) GO:0008574 - ATP-dependent microtubule motor activity, plus-end-directed (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR027640 - Kinesin-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

QWT43336.1 kinesin-like protein KIN14G [Citrullus lanatus subsp. vulgaris]

4.4e-87

93.3

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLLSE+KKLFS+D HP VETPEMNHVVP EDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENK VVMG+A
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQS+SYSDFRIRASLQ+SNKKSRYVEPD+LSTE PQVNGSELKKDPLPLPLPQSK+V SSDSNLRVTLSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

TYK10175.1 kinesin-like protein KIFC3 [Cucumis melo var. makuwa]

3.3e-82

89.8

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRKSKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ 
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSNLRV LSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

XP_004135657.2 kinesin-like protein KIN-14U [Cucumis sativus]

2.3e-83

89.9

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLL ENKKLFSSD HP VETPE NH+VP EDRKEVT TPRKSKVPSK IISNSLPRFMTSTMASRQRQ+AAENK +VMG+ 
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDP    LPLPLPQSK+VTSSDSNLRVTLSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

XP_008450750.1 PREDICTED: kinesin-like protein KIFC3 [Cucumis melo]

3.3e-82

89.8

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRKSKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ 
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSNLRV LSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

XP_038879373.1 kinesin-like protein KIN-14U [Benincasa hispida]

1.1e-82

89.69

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQ ECQKVKNQIQKAEFLLSENKKL S+D HPCVETP+M H+ P EDRKEV VTPRKSK+PSK+IISNSLPRFMTSTMASRQRQSAAENK VVMG+A
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQS+SYSDFRIRASLQLSNKKSRYVEPDTLSTE PQVN SE KKD LPLPLPQSKLV SSDSNLRVTLSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZ68 Kinesin motor domain-containing protein

1.1e-83

89.9

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLL ENKKLFSSD HP VETPE NH+VP EDRKEVT TPRKSKVPSK IISNSLPRFMTSTMASRQRQ+AAENK +VMG+ 
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDP    LPLPLPQSK+VTSSDSNLRVTLSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

A0A1S3BQZ1 kinesin-like protein KIFC3

1.6e-82

89.8

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRKSKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ 
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSNLRV LSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

A0A5D3CF59 Kinesin-like protein KIFC3

1.6e-82

89.8

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRKSKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ 
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSNLRV LSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

A0A6J1DMD1 kinesin-like protein KIN-14U

2.7e-82

87.63

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQKVKNQIQKAEFLLSENKKLFS+D HPC+ETPE N + P EDRKEV +TP+KSK PSKTIIS+SLPRFMTSTMASRQRQSAAENK VVMG+A
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KSLRFG RSSVQFSSSQSISYSDFRIRASLQ+SNKKSRY E DTLSTE P+VNG ELKKDPLPLPLPQSKLVTSSD N RVTLSRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

A0A6J1JII2 kinesin-like protein KIN-14U

4.9e-76

82.99

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA
        MKEAQEECQK+KNQIQKAEFLLSENKK FS++ HPCVET + NH+   ED+KEV VTPRK KV SK+I+SNSLPRFMTSTMASRQRQS+AENKV   G+A
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKA

Query:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI
        KS RFG RSSVQFSSSQSISYSDFRIRASL +SNKKSRYVEPDTLSTEAPQVN  ELKKD LPLP PQSKLVTSSDSNL+VT+SRHRRRMSDLI
Subjt:  KSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

SwissProt top hits

e value

%identity

Alignment

B9G2X9 Kinesin-like protein KIN-14O

4.9e-04

27.84

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Query:  EAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVE---TPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGK
        +A++E + +  QI++AE  L E KKL SS      +   +P    VV      +   +P+ ++         S+P FM+ T+ SRQR S+A +       
Subjt:  EAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVE---TPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGK

Query:  AKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDL
         KS+      + + S S S SYS  +  A  +     S   +   L  ++ Q+N S    D      P+ +    S    R  L +HRRRMS L
Subjt:  AKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDL

Q8W0Y9 Kinesin-like protein KIN-14U

1.7e-20

39.39

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKS-KVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGK
        M+E QE C+K+K ++Q+ E L++E+KKLF       +E  E   + P +  K+   TP  S K+      S  +PRFMTST+ASRQRQ+ +E +  +  K
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKS-KVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGK

Query:  AKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDT-LSTEAPQ---VNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDL
        A+S+R  A++  QFS+SQS+S SD R +A L+ S  K      ++    E P+    + S  +K+      P+SK+VTSSD N+R  L  H+RRMS L
Subjt:  AKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDT-LSTEAPQ---VNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDL

Arabidopsis top hits

e value

%identity

Alignment

AT5G27950.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

1.2e-21

39.39

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Query:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKS-KVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGK
        M+E QE C+K+K ++Q+ E L++E+KKLF       +E  E   + P +  K+   TP  S K+      S  +PRFMTST+ASRQRQ+ +E +  +  K
Subjt:  MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKS-KVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGK

Query:  AKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDT-LSTEAPQ---VNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDL
        A+S+R  A++  QFS+SQS+S SD R +A L+ S  K      ++    E P+    + S  +K+      P+SK+VTSSD N+R  L  H+RRMS L
Subjt:  AKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDT-LSTEAPQ---VNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDL

Sequences

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CDS sequence

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ATGAAGGAAGCTCAAGAGGAATGCCAAAAAGTCAAGAACCAAATACAGAAGGCCGAGTTTCTATTGAGCGAAAACAAGAAACTATTTTCTTCCGATCGTCATCCATGTGT
CGAAACTCCCGAGATGAACCATGTAGTGCCCAGGGAAGATCGGAAGGAAGTCACTGTCACTCCAAGAAAATCTAAAGTTCCAAGTAAAACTATCATTTCCAATTCTTTGC
CTCGTTTCATGACTTCTACAATGGCGAGTCGCCAAAGGCAAAGTGCTGCAGAAAACAAAGTAGTAGTGATGGGGAAAGCGAAAAGTTTGAGATTTGGAGCAAGAAGCTCT
GTCCAATTCTCGAGCTCCCAATCCATCAGTTACTCAGATTTTCGTATAAGAGCAAGCCTACAATTATCAAATAAGAAATCACGGTATGTAGAACCCGACACTCTCTCAAC
CGAAGCTCCTCAAGTCAATGGCTCAGAACTGAAAAAAGATCCATTGCCATTGCCATTGCCACAAAGCAAATTGGTAACTTCATCTGATTCGAACTTGAGAGTTACGCTTT
CTCGTCACCGGAGAAGGATGTCTGATCTAATCTAA

mRNA sequence

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Protein sequence

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MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSS
VQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

Lsi06G001940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome