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Lsi06G002080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G002080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:2345715..2348091
RNA-Seq ExpressionLsi06G002080
SyntenyLsi06G002080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601453.1 CSC1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0784.21Show/hide
Query:  RRGARLRSVQSGRAYVIICGSGGLRSRGPFSMFQFKIF
        RRGARLRS QSGRAYVIICGSGGLRSRGPF M + KI+
Subjt:  RRGARLRSVQSGRAYVIICGSGGLRSRGPFSMFQFKIF
TYH53474.1 hypothetical protein ES332_D09G102600v1 [Gossypium tomentosum]8.5e-0486.67Show/hide
Query:  RRGARLRSVQSGRAYVIICGSGGLRSRGPF
        RRGA LRS   GRAYVIICGSGGLRSRGPF
Subjt:  RRGARLRSVQSGRAYVIICGSGGLRSRGPF
TrEMBL top hitse value%identityAlignment
A0A2C9V4B8 Uncharacterized protein3.2e-0477.14Show/hide
Query:  RGARLRSVQSGRAYVIICGSGGLRSRGPFSMFQFK
        RGA LRS Q GRAYVIICG GGLRSRGP+  F+FK
Subjt:  RGARLRSVQSGRAYVIICGSGGLRSRGPFSMFQFK
A0A2C9VLT2 Uncharacterized protein9.2e-0462.5Show/hide
Query:  RRGARLRSVQSGRAYVIICGSGGLRSRGPFSMFQFKIFSL
        RRGA LRS Q GRAYV+ICG GGLRSRGP+ +     F +
Subjt:  RRGARLRSVQSGRAYVIICGSGGLRSRGPFSMFQFKIFSL
A0A2P2KC36 Uncharacterized protein MANES_02G0872007.0e-0489.66Show/hide
Query:  RRGARLRSVQSGRAYVIICGSGGLRSRGP
        RRGA LRS QS RAYVIICGSGGLRSRGP
Subjt:  RRGARLRSVQSGRAYVIICGSGGLRSRGP
A0A5D2JFZ1 Uncharacterized protein4.1e-0486.67Show/hide
Query:  RRGARLRSVQSGRAYVIICGSGGLRSRGPF
        RRGA LRS   GRAYVIICGSGGLRSRGPF
Subjt:  RRGARLRSVQSGRAYVIICGSGGLRSRGPF
A0A5D2XV61 Uncharacterized protein (Fragment)5.4e-0486.67Show/hide
Query:  RRGARLRSVQSGRAYVIICGSGGLRSRGPF
        RRGA LRS Q GRAYVIICGSGG RSRGPF
Subjt:  RRGARLRSVQSGRAYVIICGSGGLRSRGPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCACATCGGAGAAACACCCAGCAGGGACCTCACAAAGTGCTATAAATACAAGACAATGCCTAACCTTTAAACATACTTACCTGGACGGGGTCGATGGGCGATCAACAAG
GAGGGGTGCCCGCCTAAGGTCTGTCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTTCTCAATGTTCCAGTTCAAAATCT
TTTCACTTTCCAGAACGTCTGTAACAAGAGCAGAGAACTTTCTTTGCCATTCTCCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
CCCACATCGGAGAAACACCCAGCAGGGACCTCACAAAGTGCTATAAATACAAGACAATGCCTAACCTTTAAACATACTTACCTGGACGGGGTCGATGGGCGATCAACAAG
GAGGGGTGCCCGCCTAAGGTCTGTCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTTCTCAATGTTCCAGTTCAAAATCT
TTTCACTTTCCAGAACGTCTGTAACAAGAGCAGAGAACTTTCTTTGCCATTCTCCCCTTTGAACTTCTGTAAAAGCTTGAATTGAGGTTCTTATTAAGACTCAAAAGGAT
GAAAGAATAAGCAAGTGTGAAGCAAAAAGAGAACGGGAAACAGATTTTTGCCTAAAATTTGCTCCATATCGTCTAAATCCTCTTAAAGATAAGAGCCAGACCCCTCAAAG
CATAATTTTCTGAATTTAGCTCGACGCTATAGGAGGTCTATATGCATAATCTAGTTGAGTGAAATTACTGTGTCATTCATGATTGATCCTTAATTGAGACGGATTTCATC
GAAGCCAAATAGCAGGTGAGTGGAAAACGTGAAAGATTTGGTATTAGTAGCTGTGCAACCCTTTAGATTCGGACAATGTGAGATTCTTACTCCCAAAAGGAGTTACAACT
GATGATTGAAATTAGGTCATGTTTACCCAACCTTAATAAAAATTTGTGTAATTGTAATAGAATTTTACATTTTCTATTGAAAATTGGTGTAATCGTAACAGAAAAATTAT
GAATTTTTCTACGCGTCCGTTTT
Protein sequenceShow/hide protein sequence
PTSEKHPAGTSQSAINTRQCLTFKHTYLDGVDGRSTRRGARLRSVQSGRAYVIICGSGGLRSRGPFSMFQFKIFSLSRTSVTRAENFLCHSPL