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Lsi06G002260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G002260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProgrammed cell death protein 4-like
Genome locationchr06:2609540..2609764
RNA-Seq ExpressionLsi06G002260
SyntenyLsi06G002260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF48161.1 conserved hypothetical protein [Ricinus communis]5.2e-2077.94Show/hide
Query:  KSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNE
        KS KSS  + KSD R+DRKSATGM+GSPKKGGHGGKFTWAGDGYSPAEIG++ +V+D KDPNFEDP E
Subjt:  KSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNE

EOY30624.1 Uncharacterized protein TCM_037765 [Theobroma cacao]6.7e-2077.78Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPV
        MK + KSSK +GKSD RKDRKS TGM+GSPKKGGHGGK+TW GDG SPAEIGF  EV+DVKDPNFEDP+E V
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPV

KAE8653402.1 hypothetical protein Csa_007013 [Cucumis sativus]3.0e-2094.92Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMD
        MKKSEKSSKPSGKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMD
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMD

KAG6588005.1 hypothetical protein SDJN03_16570, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2587.84Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV
        MKK EKS KPSGKSD RKDRKSATGM+GSPKKGGHGGKFTWAGDGYSPAEI F+AE MDVKDPNFEDP E VAV
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV

TYK10141.1 programmed cell death protein 4-like [Cucumis melo var. makuwa]2.2e-2690.54Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV
        MKKSEKSSKP+GKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMDVKDPNFED  E VAV
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV

TrEMBL top hitse value%identityAlignment
A0A061GU30 Uncharacterized protein3.3e-2077.78Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPV
        MK + KSSK +GKSD RKDRKS TGM+GSPKKGGHGGK+TW GDG SPAEIGF  EV+DVKDPNFEDP+E V
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPV

A0A0A0LWP4 Uncharacterized protein6.8e-2689.19Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV
        MKKSEKSSKPSGKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMDVKDPNFED  E   V
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV

A0A5D3CE82 Programmed cell death protein 4-like1.0e-2690.54Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV
        MKKSEKSSKP+GKS+ RKDRKSATGMNGSPKKGGHGGKFTW+GDGYSPAEIGFKAEVMDVKDPNFED  E VAV
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV

A0A803NU54 Uncharacterized protein2.3e-2175.68Show/hide
Query:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV
        MK + K SK +GKS+ +KDRKS TG+NGSPKKGGHGGKFTWAGDGYSP+E+GF+ EVMDVKDPNFEDP E V V
Subjt:  MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV

B9RKG3 Uncharacterized protein2.5e-2077.94Show/hide
Query:  KSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNE
        KS KSS  + KSD R+DRKSATGM+GSPKKGGHGGKFTWAGDGYSPAEIG++ +V+D KDPNFEDP E
Subjt:  KSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCAGAGAAGAGCTCTAAGCCAAGCGGAAAATCCGATGGGAGGAAGGATCGAAAATCGGCGACGGGGATGAACGGATCACCGAAGAAAGGAGGCCACGGCGG
CAAGTTCACTTGGGCGGGAGACGGTTACTCTCCGGCCGAGATCGGGTTCAAGGCTGAAGTTATGGACGTGAAGGACCCTAACTTTGAAGATCCGAATGAGCCGGTGGCGG
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATCAGAGAAGAGCTCTAAGCCAAGCGGAAAATCCGATGGGAGGAAGGATCGAAAATCGGCGACGGGGATGAACGGATCACCGAAGAAAGGAGGCCACGGCGG
CAAGTTCACTTGGGCGGGAGACGGTTACTCTCCGGCCGAGATCGGGTTCAAGGCTGAAGTTATGGACGTGAAGGACCCTAACTTTGAAGATCCGAATGAGCCGGTGGCGG
TTTGA
Protein sequenceShow/hide protein sequence
MKKSEKSSKPSGKSDGRKDRKSATGMNGSPKKGGHGGKFTWAGDGYSPAEIGFKAEVMDVKDPNFEDPNEPVAV