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Lsi06G002340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G002340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnudix hydrolase 8-like
Genome locationchr06:2689508..2691791
RNA-Seq ExpressionLsi06G002340
SyntenyLsi06G002340
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR003293 - Nudix hydrolase 6-like
IPR040618 - Pre-nudix hydrolase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023627.1 Nudix hydrolase 8, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-2276.12Show/hide
Query:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
        K+G+WLK  TEQAE++ VAINEGFNYHHAEAGY ML +WIPDL S+L SD SHH GVAAFLINDNK+
Subjt:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK

TYK10134.1 nudix hydrolase 8-like isoform X2 [Cucumis melo var. makuwa]2.9e-3848.86Show/hide
Query:  MAEHKNIFPHATKNCSTNRAKLFDILLMKMP-----GV----------------------LNKDGLPETSSTRKLIPINGNIGRKRTALDVL-----GPN
        MAEHKNIFP ATKNCSTN AKLF ILLMKMP     GV                      +++ G  +     KLIPING I  KR ALDV       PN
Subjt:  MAEHKNIFPHATKNCSTNRAKLFDILLMKMP-----GV----------------------LNKDGLPETSSTRKLIPINGNIGRKRTALDVL-----GPN

Query:  PLLQTNLHH--------------PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWI
          ++   H               PS+HL SNRDS  E                        KG   K DTEQA L+SVAINEGFNYHHAEAGYVML YWI
Subjt:  PLLQTNLHH--------------PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWI

Query:  PDLPSVLPSDPSHHIGVAA
        PDLPS+LPS PSHHIGVAA
Subjt:  PDLPSVLPSDPSHHIGVAA

XP_004288902.2 PREDICTED: nudix hydrolase 8-like [Fragaria vesca subsp. vesca]4.6e-2345.06Show/hide
Query:  GVLNKDGLPETSSTRKL----IPINGNIGRKRTALDVLGPN--------PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVW
        G L K  L ETS+T KL     PI G    KRTA+ VL PN        P L    +     +  N +S       F       +S  K   M+ KKGVW
Subjt:  GVLNKDGLPETSSTRKL----IPINGNIGRKRTALDVLGPN--------PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVW

Query:  LKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
        LK   EQA+L+ +AI EGFN+HHAE GYVML YWIP  P +LP  PSHHIG+ AF+IND ++
Subjt:  LKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK

XP_008450802.1 PREDICTED: nudix hydrolase 8-like isoform X2 [Cucumis melo]1.5e-2161.46Show/hide
Query:  PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAA
        PS+HL SNRDS  E                        KG   K DTEQA L+SVAINEGFNYHHAEAGYVML YWIPDLPS+LPS PSHHIGVAA
Subjt:  PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAA

XP_022145002.1 nudix hydrolase 8-like [Momordica charantia]2.3e-3857.96Show/hide
Query:  GVLNKDGLPETSSTRKLIPINGNIGRKRTALDVLGPN-------PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDT
        GV+ KDGLPETSSTRKLIP+NGNIG KR+ALDVL P+         L  +L+   E +  N  S       F       +   +I   + KKGVWLK  T
Subjt:  GVLNKDGLPETSSTRKLIPINGNIGRKRTALDVLGPN-------PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDT

Query:  EQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
        EQA L+ +AINEGFNYH+AEAGYVML YWIPDLP +LPS PSHHIGVA FLINDNK+
Subjt:  EQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK

TrEMBL top hitse value%identityAlignment
A0A1S3BPG8 nudix hydrolase 8-like isoform X27.1e-2261.46Show/hide
Query:  PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAA
        PS+HL SNRDS  E                        KG   K DTEQA L+SVAINEGFNYHHAEAGYVML YWIPDLPS+LPS PSHHIGVAA
Subjt:  PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAA

A0A2P6RK15 Putative hydrolase9.3e-2242.41Show/hide
Query:  GVLNKDGLPETSSTRKL---IPINGNIGRKRTALDVLGPN----PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKI-FPMQRKKGVWLKFD
        G L K  L ETS+T KL    P       K+TA+ VL PN     ++   L       Y       E        F + V  +   + M+ KKGVWLK  
Subjt:  GVLNKDGLPETSSTRKL---IPINGNIGRKRTALDVLGPN----PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKI-FPMQRKKGVWLKFD

Query:  TEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
         EQA+L+ +AI EGFN+HHA+ GYVML YWIP  P +LP  PSHHIG+ AF+IND ++
Subjt:  TEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK

A0A5D3CG04 Nudix hydrolase 8-like isoform X21.4e-3848.86Show/hide
Query:  MAEHKNIFPHATKNCSTNRAKLFDILLMKMP-----GV----------------------LNKDGLPETSSTRKLIPINGNIGRKRTALDVL-----GPN
        MAEHKNIFP ATKNCSTN AKLF ILLMKMP     GV                      +++ G  +     KLIPING I  KR ALDV       PN
Subjt:  MAEHKNIFPHATKNCSTNRAKLFDILLMKMP-----GV----------------------LNKDGLPETSSTRKLIPINGNIGRKRTALDVL-----GPN

Query:  PLLQTNLHH--------------PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWI
          ++   H               PS+HL SNRDS  E                        KG   K DTEQA L+SVAINEGFNYHHAEAGYVML YWI
Subjt:  PLLQTNLHH--------------PSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWI

Query:  PDLPSVLPSDPSHHIGVAA
        PDLPS+LPS PSHHIGVAA
Subjt:  PDLPSVLPSDPSHHIGVAA

A0A5J5AVE6 Nudix hydrolase domain-containing protein4.6e-2139.55Show/hide
Query:  TKNCSTN-RAKLFD-ILLMKMPGVLNKDGLPETSSTRKLIPINGNIGRKRTALDVLGPN---PLLQTNLHHPSEHLYSN--RDSRSEKKIEFLFLFNTIV
        TKNC+ +  A+ F   LL   P +       + SS+  +  + GN   K+  + V+ PN   P +        E  Y     D  S       F      
Subjt:  TKNCSTN-RAKLFD-ILLMKMPGVLNKDGLPETSSTRKLIPINGNIGRKRTALDVLGPN---PLLQTNLHHPSEHLYSN--RDSRSEKKIEFLFLFNTIV

Query:  SLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
        SL+  + ++ KKGVW+K   EQAEL+ +AI EGFNYHHAE GYVMLIYWIP+ P +LP+ PSH IG+A F+IND ++
Subjt:  SLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK

A0A6J1CVA2 nudix hydrolase 8-like1.1e-3857.96Show/hide
Query:  GVLNKDGLPETSSTRKLIPINGNIGRKRTALDVLGPN-------PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDT
        GV+ KDGLPETSSTRKLIP+NGNIG KR+ALDVL P+         L  +L+   E +  N  S       F       +   +I   + KKGVWLK  T
Subjt:  GVLNKDGLPETSSTRKLIPINGNIGRKRTALDVLGPN-------PLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIFPMQRKKGVWLKFDT

Query:  EQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
        EQA L+ +AINEGFNYH+AEAGYVML YWIPDLP +LPS PSHHIGVA FLINDNK+
Subjt:  EQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK

SwissProt top hitse value%identityAlignment
Q6NPD7 Nudix hydrolase 103.6e-1545.21Show/hide
Query:  MQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVF
        +Q KKGVWL        L+  A+ EGF YHHAE  Y+ML+YWIP+  S +P + SH + V A ++N NK+  +
Subjt:  MQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVF

Q8L7W2 Nudix hydrolase 84.2e-1960.29Show/hide
Query:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIP-DLPSVLPSDPSHHIGVAAFLINDNKK
        KKGVWLK   EQ+EL+ +AI EGF YHHAE GYVML YWIP + PS+LP++ SH +GV  F++N +K+
Subjt:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIP-DLPSVLPSDPSHHIGVAAFLINDNKK

Q94B74 Nudix hydrolase 25.6e-1645.24Show/hide
Query:  LFNTIV-SLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
        LF+T++ S    + +Q KKGVW+K   +   L   A+ EGF +HHAE  Y+ML+YWIP     LP++ SH +G+ AF+IN NK+
Subjt:  LFNTIV-SLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK

Q9SJC6 Nudix hydrolase 56.6e-1745.68Show/hide
Query:  KIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVFEANN
        K +  Q KKG+W+K  +E + L+  AI +GF YHHAE  YVML +W+P+ PS LP + SH IG+ AF++N N + +    N
Subjt:  KIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVFEANN

Q9SU14 Nudix hydrolase 71.8e-1446.38Show/hide
Query:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRV
        KKG+W+K     A L+  A++EGF YHHAE  Y+ML+ WI + P  +P++ SH +G  A +IN N K V
Subjt:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRV

Arabidopsis top hitse value%identityAlignment
AT2G04430.1 nudix hydrolase homolog 54.7e-1845.68Show/hide
Query:  KIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVFEANN
        K +  Q KKG+W+K  +E + L+  AI +GF YHHAE  YVML +W+P+ PS LP + SH IG+ AF++N N + +    N
Subjt:  KIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVFEANN

AT4G25434.1 nudix hydrolase homolog 102.6e-1645.21Show/hide
Query:  MQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVF
        +Q KKGVWL        L+  A+ EGF YHHAE  Y+ML+YWIP+  S +P + SH + V A ++N NK+  +
Subjt:  MQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVF

AT4G25434.2 nudix hydrolase homolog 102.6e-1645.21Show/hide
Query:  MQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVF
        +Q KKGVWL        L+  A+ EGF YHHAE  Y+ML+YWIP+  S +P + SH + V A ++N NK+  +
Subjt:  MQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVF

AT5G47240.1 nudix hydrolase homolog 83.0e-2060.29Show/hide
Query:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIP-DLPSVLPSDPSHHIGVAAFLINDNKK
        KKGVWLK   EQ+EL+ +AI EGF YHHAE GYVML YWIP + PS+LP++ SH +GV  F++N +K+
Subjt:  KKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIP-DLPSVLPSDPSHHIGVAAFLINDNKK

AT5G47650.1 nudix hydrolase homolog 24.0e-1745.24Show/hide
Query:  LFNTIV-SLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK
        LF+T++ S    + +Q KKGVW+K   +   L   A+ EGF +HHAE  Y+ML+YWIP     LP++ SH +G+ AF+IN NK+
Subjt:  LFNTIV-SLNKIFPMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCATAAGAATATTTTCCCACATGCCACCAAAAATTGCAGCACAAACCGAGCCAAATTATTCGATATTCTTCTGATGAAAATGCCAGGTGTCTTGAACAAGGA
TGGTCTACCAGAAACTTCAAGTACTAGAAAACTCATTCCCATCAATGGTAACATTGGACGCAAAAGAACAGCACTTGATGTTTTAGGGCCCAACCCTCTTCTGCAAACAA
ATTTGCATCATCCCTCCGAGCATCTCTATTCCAATCGAGACTCAAGGTCTGAAAAAAAAATAGAGTTTCTTTTTCTTTTTAATACCATCGTGTCCTTGAACAAGATTTTT
CCCATGCAGAGAAAAAAAGGGGTGTGGCTCAAATTCGATACAGAGCAGGCTGAACTAATTTCTGTGGCTATTAATGAGGGGTTCAACTATCATCATGCTGAAGCAGGATA
TGTCATGCTCATTTACTGGATTCCTGATTTGCCCTCCGTGCTTCCTTCTGACCCCTCCCATCATATTGGTGTTGCAGCATTCCTCATCAATGACAACAAGAAGAGGGTGT
TTGAGGCAAATAATGAAGTTGTAAACTCGGAGAGTTGCGAGTAG
mRNA sequenceShow/hide mRNA sequence
GCAACTGCAAGCCAAAGTCTTTTTACGCTGAATTAAACCCAGTTTCATTTTCGTCAAAATTCTGCAGCAGAACAAAAATCATGAGATTGTCTTTATTCTGGCCTTCAAAT
TTCACTGCTCGGCGTCGTCATGGCGTGGTGATCAGCCTTGAAGAGGGACATGGCAGAGCATAAGAATATTTTCCCACATGCCACCAAAAATTGCAGCACAAACCGAGCCA
AATTATTCGATATTCTTCTGATGAAAATGCCAGGTGTCTTGAACAAGGATGGTCTACCAGAAACTTCAAGTACTAGAAAACTCATTCCCATCAATGGTAACATTGGACGC
AAAAGAACAGCACTTGATGTTTTAGGGCCCAACCCTCTTCTGCAAACAAATTTGCATCATCCCTCCGAGCATCTCTATTCCAATCGAGACTCAAGGTCTGAAAAAAAAAT
AGAGTTTCTTTTTCTTTTTAATACCATCGTGTCCTTGAACAAGATTTTTCCCATGCAGAGAAAAAAAGGGGTGTGGCTCAAATTCGATACAGAGCAGGCTGAACTAATTT
CTGTGGCTATTAATGAGGGGTTCAACTATCATCATGCTGAAGCAGGATATGTCATGCTCATTTACTGGATTCCTGATTTGCCCTCCGTGCTTCCTTCTGACCCCTCCCAT
CATATTGGTGTTGCAGCATTCCTCATCAATGACAACAAGAAGAGGGTGTTTGAGGCAAATAATGAAGTTGTAAACTCGGAGAGTTGCGAGTAG
Protein sequenceShow/hide protein sequence
MAEHKNIFPHATKNCSTNRAKLFDILLMKMPGVLNKDGLPETSSTRKLIPINGNIGRKRTALDVLGPNPLLQTNLHHPSEHLYSNRDSRSEKKIEFLFLFNTIVSLNKIF
PMQRKKGVWLKFDTEQAELISVAINEGFNYHHAEAGYVMLIYWIPDLPSVLPSDPSHHIGVAAFLINDNKKRVFEANNEVVNSESCE