CuGenDBv2

Gene ID	Lsi06G002500
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr06:2816149..2818757
RNA-Seq Expression	Lsi06G002500
Synteny	Lsi06G002500
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588018.1 hypothetical protein SDJN03_16583, partial [Cucurbita argyrosperma subsp. sororia]

9.0e-84

80.9

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLAR+LMKSR+D +SLPTRDDPS DDSRPIDSQAQEEMVRSFERANDQQSLLWR                            RYHAYFMEDV SWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILAC+FSIIGIVSKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLAES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

XP_008450815.1 PREDICTED: uncharacterized protein LOC103492288 isoform X2 [Cucumis melo]

7.6e-83

80.4

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLARILMKSRDD VSLPTRDDPSFDD RPID+Q QEEMVRSFERANDQQSLLWR                            RYHAYFMEDVDSWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILACTFSI+GIVSKS++HRRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSGAGICLYVDHLL ES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

XP_022927992.1 uncharacterized protein LOC111434892 [Cucurbita moschata]

9.0e-84

80.9

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLAR+LMKSR+D +SLPTRDDPS DDSRPIDSQAQEEMVRSFERANDQQSLLWR                            RYHAYFMEDV SWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILAC+FSIIGIVSKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLAES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

XP_023002535.1 uncharacterized protein LOC111496345 [Cucurbita maxima]

7.6e-83

80.4

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLAR+LMKSR+D +SLPTRDDPS DDSRPIDSQAQEEMVRSFERANDQQSLLWR                            RYHAYFMEDV SWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILAC+FSIIGIVSKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLAES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

XP_038880203.1 uncharacterized protein LOC120071865 isoform X2 [Benincasa hispida]

2.1e-85

82.91

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLARILMKSRD+ VSLPTRDDPS DD RPIDSQAQEEMVRSFERANDQQSLLWR                            RYHAYFMEDVDSWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILACTFSI+GIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSG GICLYVDHLLAESTEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BQS5 uncharacterized protein LOC103492288 isoform X2

3.7e-83

80.4

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLARILMKSRDD VSLPTRDDPSFDD RPID+Q QEEMVRSFERANDQQSLLWR                            RYHAYFMEDVDSWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILACTFSI+GIVSKS++HRRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSGAGICLYVDHLL ES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

A0A5D3CE29 Uncharacterized protein

3.7e-83

80.4

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLARILMKSRDD VSLPTRDDPSFDD RPID+Q QEEMVRSFERANDQQSLLWR                            RYHAYFMEDVDSWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILACTFSI+GIVSKS++HRRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSGAGICLYVDHLL ES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

A0A6J1EIP3 uncharacterized protein LOC111434892

4.3e-84

80.9

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLAR+LMKSR+D +SLPTRDDPS DDSRPIDSQAQEEMVRSFERANDQQSLLWR                            RYHAYFMEDV SWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILAC+FSIIGIVSKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLAES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

A0A6J1JFJ9 uncharacterized protein LOC111485278 isoform X3

9.1e-82

89.41

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWRRYHAYFMEDVDSWMIIAADWVAILACTFSIIGIVSKSNYHRR
        MAIK+L RI MKS  DA SLP+RDDPSFDD  PIDSQ QEEMVRSFERANDQQSLLWRRYHAYF+EDV+SWMIIAADWVAILAC+FSIIGIVSKSNYHRR
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWRRYHAYFMEDVDSWMIIAADWVAILACTFSIIGIVSKSNYHRR

Query:  WLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKA
        WLWCSFFI ILLSVFWLYFMM LPRFRWDVIWRPFGPLS AGICLYVDHLLAES+EEIRKLRGYMY+YKA
Subjt:  WLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKA

A0A6J1KP79 uncharacterized protein LOC111496345

3.7e-83

80.4

Show/hide

Query:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM
        MAIKKLAR+LMKSR+D +SLPTRDDPS DDSRPIDSQAQEEMVRSFERANDQQSLLWR                            RYHAYFMEDV SWM
Subjt:  MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDSWM

Query:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN
        IIAADWVAILAC+FSIIGIVSKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLAES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26240.1 unknown protein

6.0e-54

Show/hide

Query:  IKKLARILMKSR----DDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDS
        +KKLAR   ++R    DD   LPT +D    DSRPID+Q QEE VR  E A+ QQSL WR                            RYHAYFMED+ S
Subjt:  IKKLARILMKSR----DDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWR----------------------------RYHAYFMEDVDS

Query:  WMIIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKA
        WM+I+A+W+AI+AC+ SI+G+  K N HRRW W S  +G  L++FWLY+++ LP+FRWD IW PFGPL GAGICLYVDHLL ES+EE++KLR YMY+YKA
Subjt:  WMIIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGATCAAGAAGTTAGCAAGAATTTTGATGAAATCTCGGGATGATGCGGTGTCTCTTCCCACTCGGGATGATCCTTCCTTTGACGATTCCCGTCCCATCGACAGCCA
AGCGCAAGAGGAGATGGTTCGTTCGTTCGAAAGGGCAAATGATCAACAAAGTCTTTTATGGAGGCGTTATCATGCTTACTTCATGGAGGATGTTGATTCATGGATGATTA
TAGCTGCAGATTGGGTTGCTATTTTAGCTTGTACATTTTCGATCATTGGGATTGTAAGCAAGTCAAATTACCACCGGCGATGGCTTTGGTGCTCATTCTTTATTGGCATC
CTACTCTCAGTTTTCTGGTTATATTTCATGATGAGTTTGCCTAGGTTTCGATGGGATGTTATCTGGCGTCCTTTTGGTCCTCTCAGTGGGGCTGGAATCTGTTTGTATGT
AGATCATTTGCTAGCGGAATCGACCGAGGAAATACGAAAACTTCGAGGCTATATGTATTCTTATAAAGCTAACTGA

mRNA sequence

Show/hide mRNA sequence

GGGGCGCCGATGGTGGTGGCTCAGTCTCCGGTGTCCGACTTCAATATTGGCGTTCTTCATCCAAACGAACTCTGAGCCAAATCGCAGCGTGTGTCGCAGTGTTGAAGATG
GCGATCAAGAAGTTAGCAAGAATTTTGATGAAATCTCGGGATGATGCGGTGTCTCTTCCCACTCGGGATGATCCTTCCTTTGACGATTCCCGTCCCATCGACAGCCAAGC
GCAAGAGGAGATGGTTCGTTCGTTCGAAAGGGCAAATGATCAACAAAGTCTTTTATGGAGGCGTTATCATGCTTACTTCATGGAGGATGTTGATTCATGGATGATTATAG
CTGCAGATTGGGTTGCTATTTTAGCTTGTACATTTTCGATCATTGGGATTGTAAGCAAGTCAAATTACCACCGGCGATGGCTTTGGTGCTCATTCTTTATTGGCATCCTA
CTCTCAGTTTTCTGGTTATATTTCATGATGAGTTTGCCTAGGTTTCGATGGGATGTTATCTGGCGTCCTTTTGGTCCTCTCAGTGGGGCTGGAATCTGTTTGTATGTAGA
TCATTTGCTAGCGGAATCGACCGAGGAAATACGAAAACTTCGAGGCTATATGTATTCTTATAAAGCTAACTGAAAACGGAAGGAACCCCTTCTAAATTTGTATATTATCA
TTTGGTCTTACTGACGAGTTGTAACGTTTAAAGTCCCATGAAGTAGAATCTGATTAGCCGATTTTTCCTTTTTCCTTTTTCCCTTTTCTTATCTACTGAAGGAGATTAGT
TTTTCACATTTCAGATAAGAATTTAAAAGGCGTGTATAGCTTTTAAATTTTACTATTATTTCAAAAAGACAATGGTAGAATAGGTAAATAGATAAAACTTTGATAGAATT
CTATCTAGTCTATATTTCTTTTTATATTTGTAAA

Protein sequence

Show/hide protein sequence

MAIKKLARILMKSRDDAVSLPTRDDPSFDDSRPIDSQAQEEMVRSFERANDQQSLLWRRYHAYFMEDVDSWMIIAADWVAILACTFSIIGIVSKSNYHRRWLWCSFFIGI
LLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESTEEIRKLRGYMYSYKAN

Lsi06G002500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome