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Lsi06G003260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G003260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationchr06:3655383..3655604
RNA-Seq ExpressionLsi06G003260
SyntenyLsi06G003260
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055784.1 putative glucan endo-1,3-beta-glucosidase BG5 [Cucumis melo var. makuwa]1.3e-1874.6Show/hide
Query:  MASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        MASI+M  ++V A+DVLLGAYYGL G+NLP PWKVV LCEKYNIRRIRLD+P +DVL AFRG+
Subjt:  MASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

KAE8653445.1 hypothetical protein Csa_006879 [Cucumis sativus]2.4e-2588.06Show/hide
Query:  QIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        QIVFLMASI+MAATVVGAYD+LLGAYYGL GDNLP PWKVVQLCE+YNIRR+RLDVPD+DVL AFRG
Subjt:  QIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

XP_004144124.2 probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis sativus]9.6e-2786.11Show/hide
Query:  MAKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        MAK+ QIVFLMASI+MAATVVGAYD+LLGAYYGL GDNLP PWKVVQLCE+YNIRR+RLDVPD+DVL AFRG
Subjt:  MAKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

XP_008451156.1 PREDICTED: probable glucan endo-1,3-beta-glucosidase BG5 [Cucumis melo]2.1e-2175.68Show/hide
Query:  MAKLAQ-IVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        MAKL Q IVFLMASI+M  ++V A+DVLLGAYYGL G+NLP PWKVV LCEKYNIRRIRLD+P +DVL AFRG+
Subjt:  MAKLAQ-IVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

XP_038880473.1 probable glucan endo-1,3-beta-glucosidase BG5 [Benincasa hispida]2.9e-2380.82Show/hide
Query:  MAKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        MAKLAQI+FLMASIIMAAT+V AY+VLLG   GL GDNLP PWK+VQLC+KY+IRRIRLD P+IDVLNAFRGA
Subjt:  MAKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

TrEMBL top hitse value%identityAlignment
A0A0A0LZ10 (1->3)-beta-glucan endohydrolase4.6e-2786.11Show/hide
Query:  MAKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        MAK+ QIVFLMASI+MAATVVGAYD+LLGAYYGL GDNLP PWKVVQLCE+YNIRR+RLDVPD+DVL AFRG
Subjt:  MAKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

A0A1S3BQX5 (1->3)-beta-glucan endohydrolase1.0e-2175.68Show/hide
Query:  MAKLAQ-IVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        MAKL Q IVFLMASI+M  ++V A+DVLLGAYYGL G+NLP PWKVV LCEKYNIRRIRLD+P +DVL AFRG+
Subjt:  MAKLAQ-IVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

A0A5A7UKS6 (1->3)-beta-glucan endohydrolase6.1e-1974.6Show/hide
Query:  MASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        MASI+M  ++V A+DVLLGAYYGL G+NLP PWKVV LCEKYNIRRIRLD+P +DVL AFRG+
Subjt:  MASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

A0A5A7UQE4 (1->3)-beta-glucan endohydrolase1.3e-1660.29Show/hide
Query:  AQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        + ++ L+  + M++ V+GAY+VLLGAYYGL  +NLP PWKV+QLCEKYNIRRIR+D P++DV+ +FRG
Subjt:  AQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

A0A5D3CFE1 (1->3)-beta-glucan endohydrolase4.4e-1760.29Show/hide
Query:  AQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        + ++ L+  + M++ VVGAY++LLGAYYGL  +NLP PWKV+QLCEKYNIRRIR+D P++DV+ +FRG
Subjt:  AQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

SwissProt top hitse value%identityAlignment
O49352 Probable glucan endo-1,3-beta-glucosidase BG49.7e-0651.11Show/hide
Query:  LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        +G  YGL GDNLP P  V+ L +   I RIR+  P+ +VLNA RG
Subjt:  LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

O49353 Probable glucan endo-1,3-beta-glucosidase BG51.7e-0541.27Show/hide
Query:  ASIIMAATVVGAYDVL--LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        +  + AA  +G  +    +G  YGL GDNLP P KV+ L +  +I +IR+  P+ +VLNA RG
Subjt:  ASIIMAATVVGAYDVL--LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

P07979 Lichenase2.2e-0540.91Show/hide
Query:  VFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        + L+  ++ +  +VGA  V  G  YG+ G+NLP   +VVQL +  NIRR+RL  P+   L A RG+
Subjt:  VFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

Q01413 Glucan endo-1,3-beta-glucosidase B9.7e-0637.68Show/hide
Query:  AQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        +QI  ++   ++ AT +   +  +G  YG+ G+NLP   +V+QL +  NIRR+RL  P+   LNA RG+
Subjt:  AQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

Q03773 Glucan endo-1,3-beta-glucosidase2.8e-0540.28Show/hide
Query:  AKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        + +  I FL    I+  T  G  D   G  YG  G+NLP P +VV L  + NIRR+R+  P  +VL A RG+
Subjt:  AKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

Arabidopsis top hitse value%identityAlignment
AT3G57270.1 beta-1,3-glucanase 11.3e-0537.14Show/hide
Query:  LAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA
        LA +  L+    +     G     +G  YG  G+NLP P + + L ++ NI+R+RL  PD DVL A RG+
Subjt:  LAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA

AT5G20330.1 beta-1,3-glucanase 46.9e-0751.11Show/hide
Query:  LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        +G  YGL GDNLP P  V+ L +   I RIR+  P+ +VLNA RG
Subjt:  LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

AT5G20340.1 beta-1,3-glucanase 51.2e-0641.27Show/hide
Query:  ASIIMAATVVGAYDVL--LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        +  + AA  +G  +    +G  YGL GDNLP P KV+ L +  +I +IR+  P+ +VLNA RG
Subjt:  ASIIMAATVVGAYDVL--LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

AT5G20390.1 Glycosyl hydrolase superfamily protein2.6e-0640.91Show/hide
Query:  FLMASIIMAATVVGAYDVL--LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        FL  + ++  + VG  D    +G  YGL GDNLP P +V+ L +  ++  IR+     DVLNAFRG
Subjt:  FLMASIIMAATVVGAYDVL--LGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG

AT5G20560.1 Glycosyl hydrolase superfamily protein5.3e-0740.32Show/hide
Query:  ATVVGAYDV-------LLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG
        A ++  Y+V       ++G  YGL GDNLP P  V++  +  N+ +IR+  P+ DVLNA RG
Subjt:  ATVVGAYDV-------LLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAACTTGCCCAAATTGTCTTCTTAATGGCTTCAATAATAATGGCCGCTACCGTAGTCGGAGCATACGATGTTCTTCTCGGAGCTTACTACGGTCTCAGGGGTGA
CAACCTGCCTCAACCGTGGAAGGTGGTGCAACTCTGTGAGAAATACAACATTCGTCGAATTCGATTAGATGTACCAGACATCGACGTTTTAAATGCTTTTCGCGGTGCAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAACTTGCCCAAATTGTCTTCTTAATGGCTTCAATAATAATGGCCGCTACCGTAGTCGGAGCATACGATGTTCTTCTCGGAGCTTACTACGGTCTCAGGGGTGA
CAACCTGCCTCAACCGTGGAAGGTGGTGCAACTCTGTGAGAAATACAACATTCGTCGAATTCGATTAGATGTACCAGACATCGACGTTTTAAATGCTTTTCGCGGTGCAT
AA
Protein sequenceShow/hide protein sequence
MAKLAQIVFLMASIIMAATVVGAYDVLLGAYYGLRGDNLPQPWKVVQLCEKYNIRRIRLDVPDIDVLNAFRGA