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Lsi06G003460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G003460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationchr06:3807667..3808122
RNA-Seq ExpressionLsi06G003460
SyntenyLsi06G003460
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450939.1 PREDICTED: uncharacterized protein LOC103492377 [Cucumis melo]1.1e-7493.38Show/hide
Query:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI
        MLLAM LPN+DSQ  A  AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLC+EAVKDEVVRSGKLISTKEAL+RHASFC+EFRSTNP+DETEHPI
Subjt:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI

Query:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
Subjt:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

XP_011660027.1 uncharacterized protein LOC101210029 [Cucumis sativus]2.6e-7493.38Show/hide
Query:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI
        MLLAM LPNSDSQ  A  AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEAL+RHASFC+EFRSTNP+DETEHPI
Subjt:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI

Query:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        SAMGRLLRRSLDSPRVLRSNSSN I+LEPIVDIGDSARLQRSGSCFPSLSS
Subjt:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

XP_023516156.1 uncharacterized protein LOC111780103 [Cucurbita pepo subsp. pepo]9.1e-7291.56Show/hide
Query:  MLLAMALPNSDSQAAAA---AAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETE
        MLLAMALPNSDSQAAAA    AEV+CVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSG LIST+EAL+RHASFCREFRSTNPLDETE
Subjt:  MLLAMALPNSDSQAAAA---AAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETE

Query:  HPISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        HPISAMGRLLRR LDSPRVLRSNSS VIKL+PIVDIG  ARLQRSGSCFPSLSS
Subjt:  HPISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

XP_023530607.1 uncharacterized protein LOC111793105 [Cucurbita pepo subsp. pepo]2.4e-7292.86Show/hide
Query:  MLLAMALPNSDSQAAAAA---AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETE
        MLLAMALPNS+SQAAAAA   AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSG LIST+EAL +HASFCREFRSTNPLDETE
Subjt:  MLLAMALPNSDSQAAAAA---AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETE

Query:  HPISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        HPISAMGR+LRRSLDSPRVLRSNSS VIKLEPIV IGDSARLQRSGSCFPSLSS
Subjt:  HPISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

XP_038880124.1 uncharacterized protein LOC120071810 [Benincasa hispida]2.0e-7496.69Show/hide
Query:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI
        MLLAMALPNSDSQ AAA  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVR ASFCREFRSTNPLDETEHPI
Subjt:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI

Query:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        +AMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
Subjt:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

TrEMBL top hitse value%identityAlignment
A0A0A0M274 Uncharacterized protein1.2e-7493.38Show/hide
Query:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI
        MLLAM LPNSDSQ  A  AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEAL+RHASFC+EFRSTNP+DETEHPI
Subjt:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI

Query:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        SAMGRLLRRSLDSPRVLRSNSSN I+LEPIVDIGDSARLQRSGSCFPSLSS
Subjt:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

A0A1S3BRF7 uncharacterized protein LOC1034923775.6e-7593.38Show/hide
Query:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI
        MLLAM LPN+DSQ  A  AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLC+EAVKDEVVRSGKLISTKEAL+RHASFC+EFRSTNP+DETEHPI
Subjt:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI

Query:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
Subjt:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

A0A5A7UNA4 Uncharacterized protein5.6e-7593.38Show/hide
Query:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI
        MLLAM LPN+DSQ  A  AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLC+EAVKDEVVRSGKLISTKEAL+RHASFC+EFRSTNP+DETEHPI
Subjt:  MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPI

Query:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
Subjt:  SAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

A0A6J1EGW6 uncharacterized protein LOC1114339879.8e-7291.5Show/hide
Query:  MLLAMALPNSDSQAAAA--AAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEH
        MLLAMALPNS+SQAAAA   AEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSG LIST+EAL +HASFCREFRS+NPLDETEH
Subjt:  MLLAMALPNSDSQAAAA--AAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEH

Query:  PISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        PISAMGR+LRRSLDSPRVLRSNSS +IKLEPIV IGDSARLQRSGSCFPSLSS
Subjt:  PISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

A0A6J1J9D7 uncharacterized protein LOC1114847413.7e-7190.85Show/hide
Query:  MLLAMALPNSDSQAAAA--AAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEH
        MLLAMALPNSDSQAAAA    EV+CVKCYSCGF+EDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSG LIST+EAL+RHASFCREFRSTNPLDETE+
Subjt:  MLLAMALPNSDSQAAAA--AAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEH

Query:  PISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        PISAMGRLLRR LDSPRVLRSNSS VIKL+PIVDIG SARLQRSGSCFPSLSS
Subjt:  PISAMGRLLRRSLDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)5.9e-2948.55Show/hide
Query:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTN-PLDETEHPISAMGRLLRRSLDSPRVLR
        E + V C  CG TE+CT +YI  VR+R+ G+WICGLC EAVK EV+R+ +L++T+EA+ RH + C +F+S++ P + T H ISAM ++LR+SLDSPR+LR
Subjt:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTN-PLDETEHPISAMGRLLRRSLDSPRVLR

Query:  SNSSNVIKLEPIVDIGD------SARLQRSGSCFPSLS
        S  ++     P  D  D      S  L RS SCF SL+
Subjt:  SNSSNVIKLEPIVDIGD------SARLQRSGSCFPSLS

AT1G72510.2 Protein of unknown function (DUF1677)5.9e-2948.55Show/hide
Query:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTN-PLDETEHPISAMGRLLRRSLDSPRVLR
        E + V C  CG TE+CT +YI  VR+R+ G+WICGLC EAVK EV+R+ +L++T+EA+ RH + C +F+S++ P + T H ISAM ++LR+SLDSPR+LR
Subjt:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTN-PLDETEHPISAMGRLLRRSLDSPRVLR

Query:  SNSSNVIKLEPIVDIGD------SARLQRSGSCFPSLS
        S  ++     P  D  D      S  L RS SCF SL+
Subjt:  SNSSNVIKLEPIVDIGD------SARLQRSGSCFPSLS

AT2G09970.1 Protein of unknown function (DUF1677)4.4e-2443.17Show/hide
Query:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLIST-KEALVRHASFCREFRSTNPLDE-TEHPISAMGRLLRRSLDSPRVL
        E++ V C  CG T++CT +Y   +R+R+ G+WI G C EAVK +V+R+ + ++T +EA+ RH + C +F+S++P    T H ISAM ++LR+SLDSPR+L
Subjt:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLIST-KEALVRHASFCREFRSTNPLDE-TEHPISAMGRLLRRSLDSPRVL

Query:  RSNSSNVIKLEPIVDIGD------SARLQRSGSCFPSLS
        RS  ++     P  D  D      S  L RS SCF SL+
Subjt:  RSNSSNVIKLEPIVDIGD------SARLQRSGSCFPSLS

AT3G22540.1 Protein of unknown function (DUF1677)3.6e-1841.96Show/hide
Query:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPISAMGRLLRR-------SLD
        E+E V+C  CG  EDCT  YIS V+  F  +W+CGLC EAV+DEV R  K+ +  EA+  H SFC +F+  NP     H    M ++LRR       S  
Subjt:  EVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPISAMGRLLRR-------SLD

Query:  SPRVLRSNSSNV
        S +  RSN++ +
Subjt:  SPRVLRSNSSNV

AT5G20670.1 Protein of unknown function (DUF1677)2.3e-3653.47Show/hide
Query:  NSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPISAMGRLLR
        +++++ +++   VE V C +CGF E+CTPAYI+RV++R  G W+CGLC EAVKDEVVRS   IS +EAL RH +FC  FRS +P DE E PIS +GR+LR
Subjt:  NSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPISAMGRLLR

Query:  RSLD-SPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS
        RSLD SPR   + +S+   L  I  +     L RSGSCFPSLS+
Subjt:  RSLD-SPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACTGGCGATGGCGTTACCAAATTCCGACTCTCAGGCGGCGGCGGCGGCGGCGGAAGTCGAGTGTGTGAAATGTTATTCCTGCGGATTTACAGAGGATTGCACGCC
TGCTTACATTTCTCGAGTTCGCGATCGCTTCCATGGCCGGTGGATCTGCGGTCTCTGCATCGAGGCGGTGAAAGACGAAGTTGTGAGATCGGGGAAGCTCATCTCCACCA
AAGAAGCTTTGGTTCGACACGCGAGTTTCTGCAGAGAGTTCAGATCGACAAACCCTCTGGATGAAACAGAGCATCCCATCTCTGCCATGGGACGGCTACTGCGGCGGAGC
TTGGATTCTCCAAGAGTGCTCCGATCAAATTCAAGTAACGTAATCAAACTCGAACCGATTGTCGACATCGGAGATTCGGCCAGGCTCCAACGATCCGGGAGTTGCTTTCC
TTCCTTGTCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTACTGGCGATGGCGTTACCAAATTCCGACTCTCAGGCGGCGGCGGCGGCGGCGGAAGTCGAGTGTGTGAAATGTTATTCCTGCGGATTTACAGAGGATTGCACGCC
TGCTTACATTTCTCGAGTTCGCGATCGCTTCCATGGCCGGTGGATCTGCGGTCTCTGCATCGAGGCGGTGAAAGACGAAGTTGTGAGATCGGGGAAGCTCATCTCCACCA
AAGAAGCTTTGGTTCGACACGCGAGTTTCTGCAGAGAGTTCAGATCGACAAACCCTCTGGATGAAACAGAGCATCCCATCTCTGCCATGGGACGGCTACTGCGGCGGAGC
TTGGATTCTCCAAGAGTGCTCCGATCAAATTCAAGTAACGTAATCAAACTCGAACCGATTGTCGACATCGGAGATTCGGCCAGGCTCCAACGATCCGGGAGTTGCTTTCC
TTCCTTGTCTAGTTAA
Protein sequenceShow/hide protein sequence
MLLAMALPNSDSQAAAAAAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGKLISTKEALVRHASFCREFRSTNPLDETEHPISAMGRLLRRS
LDSPRVLRSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLSS