CuGenDBv2

Gene ID	Lsi06G003500
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Cupin_5 domain-containing protein
Genome location	chr06:3831237..3833243
RNA-Seq Expression	Lsi06G003500
Synteny	Lsi06G003500
Gene Ontology terms	GO:0006744 - ubiquinone biosynthetic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0008289 - lipid binding (molecular function)
InterPro domains	IPR009327 - Cupin domain of unknown function DUF985 IPR011051 - RmlC-like cupin domain superfamily IPR014710 - RmlC-like jelly roll fold IPR039935 - Uncharacterized protein YML079W-like

Homology

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GenBank top hits

e value

%identity

Alignment

TYK10013.1 Cupin_5 domain-containing protein [Cucumis melo var. makuwa]

7.4e-98

93.58

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATAS+IVAKLNLKPHPEGGFYSETFRD SVHLSKS LPP+YKVDREVSTCIYFL+PSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGT+TKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDS+A VSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

XP_004144040.1 uncharacterized protein LOC101210771 isoform X1 [Cucumis sativus]

2.5e-98

93.58

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATASEIV KLNLKPHPEGGFYSETFRD SVHLSKSHLPP+YKVDREVSTCIYFL+PSGCVS+LHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGT+TKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDS+A VSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

XP_008450945.1 PREDICTED: uncharacterized protein LOC103492382 [Cucumis melo]

6.2e-97

93.05

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATAS+IVAKLNLKPHPEGGFYSETFRD SVHLSKS LP +YKVDREVSTCIYFL+PSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGT+TKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDS+A VSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

XP_022147566.1 uncharacterized protein LOC111016461 [Momordica charantia]

1.8e-96

91.98

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATASEIVAKL+LKPHPEGGFYSETFRD+SVHLSK+HLPPQYKV REVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLT+LELN+ DGRVKLTCLG 
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FGSFPTKDF ISADGTVTKAAPRDS+NHYSLVGC+CAPAFQFEDFELAKRSDLVSRFPDS+ALVSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

XP_038878514.1 uncharacterized protein LOC120070727 [Benincasa hispida]

3.0e-99

91.24

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATASEIVAKLNLKPHPEGGFY+ETFRD+SVHLSKSHLPP+YKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTPVSGLCSS
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDL SRFP+S+AL+SLLTP   +  S
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTPVSGLCSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M280 Cupin_5 domain-containing protein

1.2e-98

93.58

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATASEIV KLNLKPHPEGGFYSETFRD SVHLSKSHLPP+YKVDREVSTCIYFL+PSGCVS+LHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGT+TKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDS+A VSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

A0A1S3BPT5 uncharacterized protein LOC103492382

3.0e-97

93.05

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATAS+IVAKLNLKPHPEGGFYSETFRD SVHLSKS LP +YKVDREVSTCIYFL+PSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGT+TKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDS+A VSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

A0A5A7UIT0 Cupin_5 domain-containing protein

3.0e-97

93.05

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATAS+IVAKLNLKPHPEGGFYSETFRD SVHLSKS LP +YKVDREVSTCIYFL+PSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGT+TKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDS+A VSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

A0A5D3CDS0 Cupin_5 domain-containing protein

3.6e-98

93.58

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATAS+IVAKLNLKPHPEGGFYSETFRD SVHLSKS LPP+YKVDREVSTCIYFL+PSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FG+FPTKDFNISADGT+TKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDS+A VSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

A0A6J1D2R9 uncharacterized protein LOC111016461

8.8e-97

91.98

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Query:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS
        MATASEIVAKL+LKPHPEGGFYSETFRD+SVHLSK+HLPPQYKV REVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLT+LELN+ DGRVKLTCLG 
Subjt:  MATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGS

Query:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
        DLIGDNQLPQYTVPP   FGSFPTKDF ISADGTVTKAAPRDS+NHYSLVGC+CAPAFQFEDFELAKRSDLVSRFPDS+ALVSLLTP
Subjt:  DLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G19130.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold (InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19; Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink).

8.7e-73

69.52

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Query:  KMATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLG
        KM  +SEIV KLNL+ H EGGF++ETFRD+SV LS S LPP +KVDR VST IYFL+PSG VS LHRIP AETWHFYLGEPLTV+EL + DG++K TCLG
Subjt:  KMATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLG

Query:  SDLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLT
         DL   +Q PQYTVPP   FGSFPTKD + S DG + KA  RDSENH+SLVGC+CAPAFQFEDFELAKRSDL+SRFP  ++L+++L+
Subjt:  SDLIGDNQLPQYTVPPR--FGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCATCATTGTGAATCCTGTGATCTTGTCTGTTGTAATCATCACTTATCACCAGTGAATCGCTTTAGGTTGAAGGAGGTTGGGGAAGAACCTAAGCAGCCAAAAATGGC
TACTGCATCAGAAATTGTAGCGAAATTGAATTTGAAGCCACATCCAGAAGGCGGTTTTTACTCTGAAACCTTCAGGGACAACTCCGTTCATCTCTCCAAATCTCACCTCC
CACCGCAGTACAAGGTTGATCGAGAGGTCAGCACGTGTATATACTTTCTGGTGCCTTCTGGATGTGTGTCTGCTCTTCATCGCATACCATGTGCAGAGACTTGGCATTTT
TACTTGGGAGAACCTCTTACGGTACTGGAGTTGAATGAAAAGGACGGTCGAGTCAAATTGACCTGTCTTGGGTCTGATCTCATTGGAGACAATCAATTACCTCAGTACAC
AGTGCCTCCGAGGTTTGGTTCATTTCCAACCAAAGACTTCAATATTTCTGCAGACGGGACTGTGACTAAAGCTGCTCCAAGGGACTCTGAGAATCACTACTCACTTGTGG
GCTGCAGCTGTGCACCTGCTTTTCAGTTTGAGGACTTTGAGTTGGCAAAACGCTCTGATCTTGTTTCACGGTTTCCCGATAGTAAAGCTCTCGTCTCGTTGCTGACACCA
GTCAGCGGATTGTGTTCTAGTGGAATAAGGCTCTTTGATGGGACGAATCTTGTAATCCCAATGTTCTGTGGATGCCCCCCACAGGAACAGAGAAATGTACCCATCACAAA
ATGA

mRNA sequence

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Protein sequence

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MHHCESCDLVCCNHHLSPVNRFRLKEVGEEPKQPKMATASEIVAKLNLKPHPEGGFYSETFRDNSVHLSKSHLPPQYKVDREVSTCIYFLVPSGCVSALHRIPCAETWHF
YLGEPLTVLELNEKDGRVKLTCLGSDLIGDNQLPQYTVPPRFGSFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSKALVSLLTP
VSGLCSSGIRLFDGTNLVIPMFCGCPPQEQRNVPITK

Lsi06G003500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome