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Lsi06G004100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G004100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSHSP domain-containing protein
Genome locationchr06:4526906..4528449
RNA-Seq ExpressionLsi06G004100
SyntenyLsi06G004100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAP50988.1 hypothetical protein [Oryza sativa Japonica Group]2.6e-0445.45Show/hide
Query:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI
        GV +G ETAV VH EDV  ++ KHLVD V + +G GD G +DV+          ++L +D Q+LLI
Subjt:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI

EEC75852.1 hypothetical protein OsI_12855 [Oryza sativa Indica Group]2.6e-0445.45Show/hide
Query:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI
        GV +G ETAV VH EDV  ++ KHLVD V + +G GD G +DV+          ++L +D Q+LLI
Subjt:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI

KAB8092850.1 hypothetical protein EE612_019372 [Oryza sativa]2.6e-0445.45Show/hide
Query:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI
        GV +G ETAV VH EDV  ++ KHLVD V + +G GD G +DV+          ++L +D Q+LLI
Subjt:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI

TrEMBL top hitse value%identityAlignment
A0A0E0GR80 SHSP domain-containing protein1.3e-0445.45Show/hide
Query:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI
        GV +G ETAV VH EDV  ++ KHLVD V + +G GD G +DV+          ++L +D Q+LLI
Subjt:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI

A0A0E0NZ22 SHSP domain-containing protein1.3e-0445.45Show/hide
Query:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI
        GV +G ETAV VH EDV  ++ KHLVD V + +G GD G +DV+          ++L +D Q+LLI
Subjt:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI

A0A1Y1M6S4 Uncharacterized protein (Fragment)3.0e-0645.59Show/hide
Query:  ELSSSNHVEEGGLDFGVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTV
        EL S +HV++G L    L+  ETAV V PE +  +  KH +D V N +  GDTGR+DV+D+RS+ S +
Subjt:  ELSSSNHVEEGGLDFGVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTV

B8ANK2 SHSP domain-containing protein1.3e-0445.45Show/hide
Query:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI
        GV +G ETAV VH EDV  ++ KHLVD V + +G GD G +DV+          ++L +D Q+LLI
Subjt:  GVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI

J3LR98 Uncharacterized protein2.8e-1255.07Show/hide
Query:  LDFGVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI
        L  GVL+G ETAV VHP+DV  E+ KHLVD VG+ +G GD+G +DVV +R+++S+V  +LT+D Q+LL+
Subjt:  LDFGVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATATGAGCTTAGCAGCAGCAACCATGTTGAGGAGGGCGGGCTTGACTTCGGTGTACTTTCGGGTTTTGAGACCGCAGTCGGGGTTCACCCAGAGGATGTTGCTTT
CGAGAACAGCAAGCATCTTGTTGATCCTGTCGGCAATTTCGTCGGTCGAGGGGATACGGGGCGAATGGATGTCGTAGACTCCAGGTCCGATTCCAGCACCGTATTTTACT
CCCTCACGAAAGACAGACAGAAGCTTCTCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATATGAGCTTAGCAGCAGCAACCATGTTGAGGAGGGCGGGCTTGACTTCGGTGTACTTTCGGGTTTTGAGACCGCAGTCGGGGTTCACCCAGAGGATGTTGCTTT
CGAGAACAGCAAGCATCTTGTTGATCCTGTCGGCAATTTCGTCGGTCGAGGGGATACGGGGCGAATGGATGTCGTAGACTCCAGGTCCGATTCCAGCACCGTATTTTACT
CCCTCACGAAAGACAGACAGAAGCTTCTCATCTGA
Protein sequenceShow/hide protein sequence
MKYELSSSNHVEEGGLDFGVLSGFETAVGVHPEDVAFENSKHLVDPVGNFVGRGDTGRMDVVDSRSDSSTVFYSLTKDRQKLLI