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Lsi06G004300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G004300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:4716699..4718490
RNA-Seq ExpressionLsi06G004300
SyntenyLsi06G004300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055681.1 uncharacterized protein E6C27_scaffold181G00620 [Cucumis melo var. makuwa]2.3e-5078.34Show/hide
Query:  MLQKDPTNFPPS--PFPSTSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN
        MLQKDPTNFP S  PF ST ISMA  Q E   NETY ER+S LEWSKARK MIEEQA  EL+SLQLLYPNRFEYLKLELKSFIHLLQSQSE  FPQPN  
Subjt:  MLQKDPTNFPPS--PFPSTSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN

Query:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRV
        L S RSPSPS F PD+QESSSCRKR+K+EEG    RNGLQRE AESESKIGRRKDRV
Subjt:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRV

TYK27024.1 uncharacterized protein E5676_scaffold5245G00010 [Cucumis melo var. makuwa]3.4e-5479.87Show/hide
Query:  QRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKME
        +  NETY ER+S LEWSKARK MIEEQA  EL+SLQLLYPNRFEYLKLELKSFIHLLQSQSE  FPQPN  L S RSPSP  F PD+QESSSCRKR+K+E
Subjt:  QRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKME

Query:  EG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG
        EG    RNGLQRE AESESKIGRRKDRV+VVLERAAVCLCKI+RFK ALFSS G
Subjt:  EG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

XP_004144150.1 uncharacterized protein LOC101216009 [Cucumis sativus]1.1e-5276.73Show/hide
Query:  VQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKM
        V+  NETY E++S LEWSKARK MIEEQA AEL+SLQLLYPNRFEYLKLELKSFIHLLQSQ E  FPQPN NL S RSPSPS F PD+QESSSCRKR+K+
Subjt:  VQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKM

Query:  EE----GRNGLQREAA----ESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG
         E    GRNGLQ+E A    ESE+K+GR KDRVDVVLERAAVCLCKI+RFK ALFSSAG
Subjt:  EE----GRNGLQREAA----ESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

XP_008451071.1 PREDICTED: uncharacterized protein LOC103492458 [Cucumis melo]1.5e-6278.69Show/hide
Query:  MLQKDPTNFPPSPFP--STSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN
        MLQKDPTNFP S FP  ST ISMA  Q E   NETY ER+S LEWSKARK MIEEQA  EL+SLQLLYPNRFEYLKLELKSFIHLLQSQSE  FPQPN  
Subjt:  MLQKDPTNFPPSPFP--STSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN

Query:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG
        L S RSPSP  F PD+QESSSCRKR+K+EEG    RNGLQRE AESESKIGRRKDRV+VVLERAAVCLCKI+RFK ALFSS G
Subjt:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

XP_038878738.1 uncharacterized protein LOC120070912 [Benincasa hispida]1.4e-7187.08Show/hide
Query:  MLQKDPTNFPPSPFPSTS----ISMAAVQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNL
        MLQKDP NFPPSPFPSTS    ISMAAV RENETYRE MS LEWSK+RKKMIEEQA AELESLQLLYPNRFEYLKLELKSFIHLLQSQSEE FPQP+  L
Subjt:  MLQKDPTNFPPSPFPSTS----ISMAAVQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNL

Query:  ASKRSPSPSYFAPDSQESSSCRKRKKMEEGRNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG
         SK SPSPS  APDSQESSSCRKRKKMEEGRNGLQRE  ESESKI RRKDRVDVVLERAAVCLCKI+RFKTALFS+AG
Subjt:  ASKRSPSPSYFAPDSQESSSCRKRKKMEEGRNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

TrEMBL top hitse value%identityAlignment
A0A0A0LX97 Uncharacterized protein5.3e-5376.73Show/hide
Query:  VQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKM
        V+  NETY E++S LEWSKARK MIEEQA AEL+SLQLLYPNRFEYLKLELKSFIHLLQSQ E  FPQPN NL S RSPSPS F PD+QESSSCRKR+K+
Subjt:  VQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKM

Query:  EE----GRNGLQREAA----ESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG
         E    GRNGLQ+E A    ESE+K+GR KDRVDVVLERAAVCLCKI+RFK ALFSSAG
Subjt:  EE----GRNGLQREAA----ESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

A0A1S3BRF0 uncharacterized protein LOC1034924587.3e-6378.69Show/hide
Query:  MLQKDPTNFPPSPFP--STSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN
        MLQKDPTNFP S FP  ST ISMA  Q E   NETY ER+S LEWSKARK MIEEQA  EL+SLQLLYPNRFEYLKLELKSFIHLLQSQSE  FPQPN  
Subjt:  MLQKDPTNFPPSPFP--STSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN

Query:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG
        L S RSPSP  F PD+QESSSCRKR+K+EEG    RNGLQRE AESESKIGRRKDRV+VVLERAAVCLCKI+RFK ALFSS G
Subjt:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

A0A5A7UQ57 Uncharacterized protein1.1e-5078.34Show/hide
Query:  MLQKDPTNFPPS--PFPSTSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN
        MLQKDPTNFP S  PF ST ISMA  Q E   NETY ER+S LEWSKARK MIEEQA  EL+SLQLLYPNRFEYLKLELKSFIHLLQSQSE  FPQPN  
Subjt:  MLQKDPTNFPPS--PFPSTSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN

Query:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRV
        L S RSPSPS F PD+QESSSCRKR+K+EEG    RNGLQRE AESESKIGRRKDRV
Subjt:  LASKRSPSPSYFAPDSQESSSCRKRKKMEEG----RNGLQREAAESESKIGRRKDRV

A0A5D3DU40 Uncharacterized protein1.6e-5479.87Show/hide
Query:  QRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKME
        +  NETY ER+S LEWSKARK MIEEQA  EL+SLQLLYPNRFEYLKLELKSFIHLLQSQSE  FPQPN  L S RSPSP  F PD+QESSSCRKR+K+E
Subjt:  QRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKME

Query:  EG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG
        EG    RNGLQRE AESESKIGRRKDRV+VVLERAAVCLCKI+RFK ALFSS G
Subjt:  EG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

A0A6J1F625 uncharacterized protein LOC111441161 isoform X22.3e-4073.51Show/hide
Query:  MSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQ----SEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKMEEG----
        M  LEWS+ARK+MIE+QAKAELESLQLL+PNRFEYLKLELKSFI LLQSQ    SEE F QPN   AS+R  SPS  APDSQESSSCRKR+KMEEG    
Subjt:  MSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQ----SEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKMEEG----

Query:  --RNGLQREAAESES--KIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSA
           NGL+RE AESE+  K GRR+DRVDVVLERA VCL KIQRFKTAL S+A
Subjt:  --RNGLQREAAESES--KIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36960.1 unknown protein3.9e-0839.31Show/hide
Query:  SKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSC---RKRKKMEEGRNGLQREAAES
        S + +  + E AK ELE LQ  YPNRF YLK +L+SFI  L+   E+  P   P L      SPS     +QESS+C   +K KK +   + L  +A+ S
Subjt:  SKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSC---RKRKKMEEGRNGLQREAAES

Query:  --------ESKIGRR-----KDRVDVVLERAAVCLCKIQRFKTAL
                 +K+G+R     K+RV++VLERA +CL KI+  K +L
Subjt:  --------ESKIGRR-----KDRVDVVLERAAVCLCKIQRFKTAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAAAAAGACCCCACAAACTTTCCGCCTTCTCCTTTCCCTTCCACTTCCATTTCCATGGCAGCAGTCCAGAGAGAAAACGAGACATACCGAGAAAGAATGTCGAG
ATTGGAATGGAGTAAAGCAAGGAAGAAGATGATCGAAGAACAGGCAAAGGCCGAATTAGAATCTCTCCAACTTCTCTACCCGAATCGTTTCGAATACCTAAAACTCGAGC
TCAAATCCTTCATCCATCTTCTTCAATCGCAATCGGAAGAGTCTTTTCCTCAGCCGAACCCTAACTTAGCCTCTAAACGCTCTCCGTCGCCGTCCTATTTCGCTCCTGAT
TCGCAAGAATCGAGTAGTTGTAGAAAGAGGAAGAAGATGGAGGAAGGAAGAAACGGATTACAGAGAGAGGCTGCTGAATCTGAATCGAAGATTGGACGGCGGAAGGATAG
AGTAGATGTAGTTCTGGAAAGAGCCGCCGTTTGTCTCTGCAAGATTCAACGGTTCAAAACGGCTCTGTTTTCCTCCGCCGGTTGA
mRNA sequenceShow/hide mRNA sequence
CGAGAACCCCAAAAATCAGTGAAATGTTGCAAAAAGACCCCACAAACTTTCCGCCTTCTCCTTTCCCTTCCACTTCCATTTCCATGGCAGCAGTCCAGAGAGAAAACGAG
ACATACCGAGAAAGAATGTCGAGATTGGAATGGAGTAAAGCAAGGAAGAAGATGATCGAAGAACAGGCAAAGGCCGAATTAGAATCTCTCCAACTTCTCTACCCGAATCG
TTTCGAATACCTAAAACTCGAGCTCAAATCCTTCATCCATCTTCTTCAATCGCAATCGGAAGAGTCTTTTCCTCAGCCGAACCCTAACTTAGCCTCTAAACGCTCTCCGT
CGCCGTCCTATTTCGCTCCTGATTCGCAAGAATCGAGTAGTTGTAGAAAGAGGAAGAAGATGGAGGAAGGAAGAAACGGATTACAGAGAGAGGCTGCTGAATCTGAATCG
AAGATTGGACGGCGGAAGGATAGAGTAGATGTAGTTCTGGAAAGAGCCGCCGTTTGTCTCTGCAAGATTCAACGGTTCAAAACGGCTCTGTTTTCCTCCGCCGGTTGACG
ACGGCGCTCCGTCTTCTTGACGCCTCGAAGCGAGATTTCCTTCTCGCCCTCTTGTTTTTTCGAATCAAAGATGTAAGTTGGAGCGTGAATCAGAACGAGAGGAAGAAGCG
AGTGTGAGACCAATAAATAAGAGGAAGAAGCAAGAGTGAGAATTCGAACGAAGGAAAAAATTACGAAATTGACAAGGAAGAATTCAAACGAATGAAAAAAGGAAGGAGAA
CAATGTGAATCGAAGAACGAGATGAAGGAATGAGAAATCTGGGTTGTGTCCGACCTCACGCGTGTTTTAGAGTCAAAATGGTACGTTTATATGCGACTGGCGTAAGCGAA
AGGCCAAATTTTGAGCGTTTTTAAAGTGAG
Protein sequenceShow/hide protein sequence
MLQKDPTNFPPSPFPSTSISMAAVQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPD
SQESSSCRKRKKMEEGRNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG