; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G004320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G004320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnon-specific lipid transfer protein GPI-anchored 2-like
Genome locationchr06:4726013..4729311
RNA-Seq ExpressionLsi06G004320
SyntenyLsi06G004320
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 - Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055678.1 non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumis melo var. makuwa]4.0e-4181.31Show/hide
Query:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA
        A A I   +VA +AI+GI+ QAPAPGPAGEVDCFTTLLNMSDCLSYV+ GSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVG TIDVDRA+KLPS 
Subjt:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA

Query:  CNVSTPP
        C VSTPP
Subjt:  CNVSTPP

XP_004144106.1 xylogen-like protein 11 [Cucumis sativus]9.2e-3880.81Show/hide
Query:  VAIIAIQGIAAQAPAPGP--AGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTP
        + I+AI+GI+ QAPAPGP   GEVDCFTTLL MSDCL YV+TGSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVGFTIDVDRA+KLP+ C+VSTP
Subjt:  VAIIAIQGIAAQAPAPGP--AGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTP

XP_008451078.1 PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X1 [Cucumis melo]5.2e-4180.37Show/hide
Query:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA
        A A I   +VA +AI+GI+ QAPAPGPAGEVDCFTTLLNMSDCLSYV+ GSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVG TIDVDRA+KLPS 
Subjt:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA

Query:  CNVSTPP
        C +STPP
Subjt:  CNVSTPP

XP_008451079.1 PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumis melo]5.2e-4180.37Show/hide
Query:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA
        A A I   +VA +AI+GI+ QAPAPGPAGEVDCFTTLLNMSDCLSYV+ GSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVG TIDVDRA+KLPS 
Subjt:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA

Query:  CNVSTPP
        C +STPP
Subjt:  CNVSTPP

XP_038879591.1 non-specific lipid transfer protein GPI-anchored 2 [Benincasa hispida]1.7e-4484.11Show/hide
Query:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA
        AV SIF F+VA++AI GIAAQAPAPGPAGEVDCFTTLLNMSDCLSYV+TGSNDTKPNKQCCSELA LV+ SP CLC+LLSDPDKVG T+D+DRA+KLPSA
Subjt:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA

Query:  CNVSTPP
        C+VSTPP
Subjt:  CNVSTPP

TrEMBL top hitse value%identityAlignment
A0A0A0M2I0 Lipid binding protein4.4e-3880.81Show/hide
Query:  VAIIAIQGIAAQAPAPGP--AGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTP
        + I+AI+GI+ QAPAPGP   GEVDCFTTLL MSDCL YV+TGSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVGFTIDVDRA+KLP+ C+VSTP
Subjt:  VAIIAIQGIAAQAPAPGP--AGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTP

A0A1S3BRF5 non-specific lipid transfer protein GPI-anchored 2 isoform X12.5e-4180.37Show/hide
Query:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA
        A A I   +VA +AI+GI+ QAPAPGPAGEVDCFTTLLNMSDCLSYV+ GSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVG TIDVDRA+KLPS 
Subjt:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA

Query:  CNVSTPP
        C +STPP
Subjt:  CNVSTPP

A0A1S3BRS5 non-specific lipid transfer protein GPI-anchored 2 isoform X22.5e-4180.37Show/hide
Query:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA
        A A I   +VA +AI+GI+ QAPAPGPAGEVDCFTTLLNMSDCLSYV+ GSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVG TIDVDRA+KLPS 
Subjt:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA

Query:  CNVSTPP
        C +STPP
Subjt:  CNVSTPP

A0A5D3BC16 Non-specific lipid transfer protein GPI-anchored 2 isoform X21.9e-4181.31Show/hide
Query:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA
        A A I   +VA +AI+GI+ QAPAPGPAGEVDCFTTLLNMSDCLSYV+ GSNDTKPNKQCCSELA LV+ SPKCLCELLSDPDKVG TIDVDRA+KLPS 
Subjt:  AVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSA

Query:  CNVSTPP
        C VSTPP
Subjt:  CNVSTPP

A0A6J1JCG9 non-specific lipid transfer protein GPI-anchored 2-like1.4e-3674.55Show/hide
Query:  AVASIFVFSVAIIAIQGIA---AQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKL
        A  SIF  +  IIAI GIA   AQAPAPGPA   DCFTTLLNMSDCLSYVS GS D KP+K CC ELA LV+ SP CLC+LLSDP+KVG TIDVDRA+KL
Subjt:  AVASIFVFSVAIIAIQGIA---AQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKL

Query:  PSACNVSTPP
        PSACNVSTPP
Subjt:  PSACNVSTPP

SwissProt top hitse value%identityAlignment
Q2PE60 Non-specific lipid transfer protein GPI-anchored 231.3e-1538.64Show/hide
Query:  AQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP
        + AP P P+   DC + + +M DCLS+++ GS D  P K CC  + ++++ SPKCLC  L    ++GF +D  +A+ +P  CNV   P
Subjt:  AQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP

Q2PE70 Non-specific lipid transfer protein GPI-anchored 43.9e-1540.7Show/hide
Query:  APAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP
        APAPGP+   DC T + +M DCL Y+  GSN+TKP K CC+ + +++  +P+C+C  L    ++G  ++  RA+  P AC +S  P
Subjt:  APAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP

Q8VYI9 Non-specific lipid transfer protein GPI-anchored 313.3e-1437.38Show/hide
Query:  TAVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPS
        T +  I + S++ +++ G A+   A  PA  VDC T +LNM+DCLS+VS+G    KP   CCS L +++    +CLCE       +G T+++ +A  LP+
Subjt:  TAVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPS

Query:  ACNVSTP
        AC +  P
Subjt:  ACNVSTP

Q9LZH5 Non-specific lipid transfer protein GPI-anchored 21.3e-1541.74Show/hide
Query:  VASIFVFSVAIIAIQ---GIAAQ---APAPGPAGEVDCFTTLLNMSDCLSYVSTGSND--TKPNKQCCSELASLVDKSPKCLCELLSD--PDKVGFTIDV
        ++++ V +V +I       ++AQ   +P+ GP+G  DC   L+NM+ CLSYV+ G      KP+K CC  LA LV+ SP+CLC LLS     ++G  ID 
Subjt:  VASIFVFSVAIIAIQ---GIAAQ---APAPGPAGEVDCFTTLLNMSDCLSYVSTGSND--TKPNKQCCSELASLVDKSPKCLCELLSD--PDKVGFTIDV

Query:  DRAVKLPSACNVSTP
         +A+KLP  C V TP
Subjt:  DRAVKLPSACNVSTP

Q9ZQI8 Non-specific lipid transfer protein GPI-anchored 116.0e-1640.62Show/hide
Query:  IIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP
        I+ I  + A          VDC + +LNM+DCLS+V++GS   KP   CCS L ++V   P+CLCE   +   +G T+D+ +A  LPS C V+ PP
Subjt:  IIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP

Arabidopsis top hitse value%identityAlignment
AT1G36150.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.5e-1738.64Show/hide
Query:  AQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP
        + AP P P+   DC + + +M DCLS+++ GS D  P K CC  + ++++ SPKCLC  L    ++GF +D  +A+ +P  CNV   P
Subjt:  AQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP

AT2G13820.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.3e-1740.62Show/hide
Query:  IIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP
        I+ I  + A          VDC + +LNM+DCLS+V++GS   KP   CCS L ++V   P+CLCE   +   +G T+D+ +A  LPS C V+ PP
Subjt:  IIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP

AT2G13820.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.3e-1740.62Show/hide
Query:  IIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP
        I+ I  + A          VDC + +LNM+DCLS+V++GS   KP   CCS L ++V   P+CLCE   +   +G T+D+ +A  LPS C V+ PP
Subjt:  IIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP

AT3G43720.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.5e-1741.74Show/hide
Query:  VASIFVFSVAIIAIQ---GIAAQ---APAPGPAGEVDCFTTLLNMSDCLSYVSTGSND--TKPNKQCCSELASLVDKSPKCLCELLSD--PDKVGFTIDV
        ++++ V +V +I       ++AQ   +P+ GP+G  DC   L+NM+ CLSYV+ G      KP+K CC  LA LV+ SP+CLC LLS     ++G  ID 
Subjt:  VASIFVFSVAIIAIQ---GIAAQ---APAPGPAGEVDCFTTLLNMSDCLSYVSTGSND--TKPNKQCCSELASLVDKSPKCLCELLSD--PDKVGFTIDV

Query:  DRAVKLPSACNVSTP
         +A+KLP  C V TP
Subjt:  DRAVKLPSACNVSTP

AT3G43720.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.5e-1741.74Show/hide
Query:  VASIFVFSVAIIAIQ---GIAAQ---APAPGPAGEVDCFTTLLNMSDCLSYVSTGSND--TKPNKQCCSELASLVDKSPKCLCELLSD--PDKVGFTIDV
        ++++ V +V +I       ++AQ   +P+ GP+G  DC   L+NM+ CLSYV+ G      KP+K CC  LA LV+ SP+CLC LLS     ++G  ID 
Subjt:  VASIFVFSVAIIAIQ---GIAAQ---APAPGPAGEVDCFTTLLNMSDCLSYVSTGSND--TKPNKQCCSELASLVDKSPKCLCELLSD--PDKVGFTIDV

Query:  DRAVKLPSACNVSTP
         +A+KLP  C V TP
Subjt:  DRAVKLPSACNVSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCCGTGGCCTCGATCTTCGTGTTCTCAGTGGCGATAATCGCGATTCAGGGCATTGCAGCGCAGGCTCCGGCGCCGGGACCGGCAGGGGAAGTAGATTGCTT
TACGACGCTGCTGAACATGTCGGATTGCCTGTCGTACGTGTCGACGGGGAGCAACGATACGAAGCCGAACAAACAATGCTGCTCGGAGCTGGCGAGTCTGGTGGATAAGA
GCCCTAAGTGCCTCTGTGAGCTGCTTAGCGATCCTGATAAAGTTGGTTTTACCATTGATGTTGATAGAGCTGTGAAGCTTCCTTCCGCCTGCAATGTCTCCACTCCTCCC
TGGGATCAGCAAATAGTCCAGCATCAGCCCCAGCACCAGGACCAGGCGTTCAACCACCGGAGGCGGGAGACACCGGCACCACCGGCACCCCAGGGAACACTGGGAATAGG
GCTTCGATCATCGACCACCTTCATCTTGCATTTCCACTTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATCGCGACCAATGGCGACGGCCGTGGCCTCGATCTTCGTGTTCTCAGTGGCGATAATCGCGATTCAGGGCATTGCAGCGCAGGCTCCGGCGCCGGGACCGGCAGGGGAAG
TAGATTGCTTTACGACGCTGCTGAACATGTCGGATTGCCTGTCGTACGTGTCGACGGGGAGCAACGATACGAAGCCGAACAAACAATGCTGCTCGGAGCTGGCGAGTCTG
GTGGATAAGAGCCCTAAGTGCCTCTGTGAGCTGCTTAGCGATCCTGATAAAGTTGGTTTTACCATTGATGTTGATAGAGCTGTGAAGCTTCCTTCCGCCTGCAATGTCTC
CACTCCTCCCTGGGATCAGCAAATAGTCCAGCATCAGCCCCAGCACCAGGACCAGGCGTTCAACCACCGGAGGCGGGAGACACCGGCACCACCGGCACCCCAGGGAACAC
TGGGAATAGGGCTTCGATCATCGACCACCTTCATCTTGCATTTCCACTTGGCTTAGCCTTAGCATTTCTTCCTACACTTCTCTAACCAAGATATCTTTGATAATCTATTA
TTGTTTGCCTATTCTTCTGTATTTCCTTCTCAGTTTAGAAGTCATTGTATTGTATTGTACTGAGATATTTTCATGATTGTTAGGTCAATAAAATGTTAGCTTCTATTGAA
ATATTTTTGTTGAAACTACC
Protein sequenceShow/hide protein sequence
MATAVASIFVFSVAIIAIQGIAAQAPAPGPAGEVDCFTTLLNMSDCLSYVSTGSNDTKPNKQCCSELASLVDKSPKCLCELLSDPDKVGFTIDVDRAVKLPSACNVSTPP
WDQQIVQHQPQHQDQAFNHRRRETPAPPAPQGTLGIGLRSSTTFILHFHLA