; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G004450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G004450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlamin-like protein
Genome locationchr06:4871787..4872807
RNA-Seq ExpressionLsi06G004450
SyntenyLsi06G004450
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023887.1 Lamin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6475.46Show/hide
Query:  MFGMAAEKVATTVAAVAV--AGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG
        MFGM AE    T  AV V  AGWLL GVEGR+PVLHRVGGGKYTWTTN+NFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY+SCNE DF+FN+T+G
Subjt:  MFGMAAEKVATTVAAVAV--AGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG

Query:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI
        GRDVFNLT+AK YYFLSGRGFCFQGMKV++FVE+SPPI  P + N S S+QPL    SL + I
Subjt:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI

XP_008451094.1 PREDICTED: lamin-like protein [Cucumis melo]5.7e-7281.76Show/hide
Query:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR
        MFGMAA+ V TTV  V V GWLL GVEG+QPVLH VGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYE+CN+KDFIFNITKGGR
Subjt:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR

Query:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEE---------SPPILPPNLPNISPSLQPLLLPFSLLLFI
        DVFNLTEAK+YYFLSGRGFCFQGMKV+VFVEE         SPP LP N PN+SPSL+PLL+PFS LL I
Subjt:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEE---------SPPILPPNLPNISPSLQPLLLPFSLLLFI

XP_022988228.1 lamin-like protein [Cucurbita maxima]3.6e-6677.3Show/hide
Query:  MFGMAAE--KVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG
        MFGM AE   V T V  V +AGWLL GV+GRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY+SCNE DF+FN+T+G
Subjt:  MFGMAAE--KVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG

Query:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI
        GRDVFNLT+AK YYFLSGRGFCFQGMKV++FVE+SPPI  P + N S S+QPL    SL LFI
Subjt:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI

XP_031736018.1 lamin-like protein [Cucumis sativus]1.7e-6880Show/hide
Query:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR
        MFGMAAE +   +  V V GWLL GVEG+QPVLH VGGGKYTWTTNINFTDWSIH+HFYVGDWLYFGFDKHIYNVLEVNKTSYE+CNEKDFIFNITKGGR
Subjt:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR

Query:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEE-SPP----ILPPNLP----NISPSLQPLLLPFSLLLFI
        DVFNLTEAK+YYFLSGRGFCFQGMKV+VFVEE SPP    I  PNLP    N+SPSL+PLL+PFS  L I
Subjt:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEE-SPP----ILPPNLP----NISPSLQPLLLPFSLLLFI

XP_038880463.1 lamin-like protein [Benincasa hispida]7.9e-7487.42Show/hide
Query:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR
        MFGMA E V TTV A+AVAGWLLFG EGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCN+K FIFN+T+GGR
Subjt:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR

Query:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPIL-PPNLPNI---SPSLQPLLLPF
        DVFNLTEAK+YYFLSGRGFCFQGMKV+VFVEESPPI+ PPNLPN+   SPSLQPL+ PF
Subjt:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPIL-PPNLPNI---SPSLQPLLLPF

TrEMBL top hitse value%identityAlignment
A0A1S3BQT0 lamin-like protein2.8e-7281.76Show/hide
Query:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR
        MFGMAA+ V TTV  V V GWLL GVEG+QPVLH VGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYE+CN+KDFIFNITKGGR
Subjt:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR

Query:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEE---------SPPILPPNLPNISPSLQPLLLPFSLLLFI
        DVFNLTEAK+YYFLSGRGFCFQGMKV+VFVEE         SPP LP N PN+SPSL+PLL+PFS LL I
Subjt:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEE---------SPPILPPNLPNISPSLQPLLLPFSLLLFI

A0A2P6QEZ3 Putative cupredoxin7.3e-4975.89Show/hide
Query:  VEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSGRGFCFQGMK
        VE R+PVLHRVGGG++TW  +INFTDWS  EHFYVGDWLYFGFDKHIYNVLEVN+TSYE+C +K++I+N+T+GGRDVFNLTEAK+YYFL GRG+C++GMK
Subjt:  VEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSGRGFCFQGMK

Query:  VSVFVEESPPIL
        V+VFVE++PP+L
Subjt:  VSVFVEESPPIL

A0A6J1DWA4 lamin-like protein3.4e-6275.76Show/hide
Query:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR
        MFG+    +A  VA VA+ GWLL GVEGR P+LHRVGGGKYTW  N+NFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVN+TSYESCNEKDFIFNIT+GGR
Subjt:  MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGR

Query:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPP--ILPPNLP---NISPSLQPLLLPFSLLLF
        DVFNLT+AK YYFLSGRGFC+QGMK++VFVEESPP    PPNLP   N+SPS+   L    LLLF
Subjt:  DVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPP--ILPPNLP---NISPSLQPLLLPFSLLLF

A0A6J1HAJ6 lamin-like protein9.5e-6574.85Show/hide
Query:  MFGMAAEKVATTVAAVAV--AGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG
        MFGM  E    T  AV V  AGWLL GVEGR+PVLHRVGGGKYTWTTN+NFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY+SCNE DF+FN+T+G
Subjt:  MFGMAAEKVATTVAAVAV--AGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG

Query:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI
        GRDVFNLT+AK YYFLSGRGFCFQGMKV++FVE+SPPI  P + N S S+QPL    SL + I
Subjt:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI

A0A6J1JLN0 lamin-like protein1.7e-6677.3Show/hide
Query:  MFGMAAE--KVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG
        MFGM AE   V T V  V +AGWLL GV+GRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY+SCNE DF+FN+T+G
Subjt:  MFGMAAE--KVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG

Query:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI
        GRDVFNLT+AK YYFLSGRGFCFQGMKV++FVE+SPPI  P + N S S+QPL    SL LFI
Subjt:  GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI

SwissProt top hitse value%identityAlignment
O82081 Uclacyanin 17.1e-0933.04Show/hide
Query:  GGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPIL
        GG   WT   +   W+  + F VGD L F +    ++V+EV K  ++SC     +     G   V   T  K Y+     G C QGMK+ V V  +  + 
Subjt:  GGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPIL

Query:  P-PNLPNISPSL
        P   LPN  PSL
Subjt:  P-PNLPNISPSL

Q39131 Lamin-like protein2.7e-2442.68Show/hide
Query:  VAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSY
        + AV +A  +   + G     + VG  K+ W  NIN+T W+  +HFY+GDWLYF FD++ +N+LEVNKT YE C     I N T+G GRD+  L + K Y
Subjt:  VAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSY

Query:  YFLSGRGFCFQGMKVSVFVEESPPILPP------NLPNIS--PSLQPLLLPFSLLLF
        Y L G+G C+ GMK+SV VE+ PP  PP      N+ ++S    L   ++P SL  F
Subjt:  YFLSGRGFCFQGMKVSVFVEESPPILPP------NLPNIS--PSLQPLLLPFSLLLF

Q9SK27 Early nodulin-like protein 11.2e-0833.88Show/hide
Query:  VGGGKYTW----TTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSG-RGFCFQGMKVSVFV
        VGG    W    +++ +FT+W+    F VGD++ F ++    +VLEV K +Y SCN  + + N T G   V  L  +  +YF+SG  G C +G K+S+ V
Subjt:  VGGGKYTW----TTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSG-RGFCFQGMKVSVFV

Query:  EESPPILPPNLPNISPSLQPL
              + P    ISP+  P+
Subjt:  EESPPILPPNLPNISPSLQPL

Q9T076 Early nodulin-like protein 23.2e-0938.54Show/hide
Query:  GGKYTWTTN--INFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSG-RGFCFQGMKVSVFV
        GG   W TN   N+  WS    F V D LYF + K   +VLEVNK  Y++CN K+ I  +  G  ++ +L     +YF+SG    C +G K++V V
Subjt:  GGKYTWTTN--INFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYFLSG-RGFCFQGMKVSVFV

Arabidopsis top hitse value%identityAlignment
AT2G27035.1 early nodulin-like protein 207.5e-3848.99Show/hide
Query:  AAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYF
        A V V   +L  V   +  LHRVGGG+YTW +++NF+DW+ H+ FY GDWLYFGF++  +N+L+VNK+SYE C + D+IFNIT+GGRDVF L E K YYF
Subjt:  AAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKSYYF

Query:  LSGRGFCFQGMKVSVFV-EESPPILPPNLPN-ISPSLQPLLLPFSLLLF
        + GRG+C +GMK+++ V  + PP  P N  +  +P + P  +  ++L+F
Subjt:  LSGRGFCFQGMKVSVFV-EESPPILPPNLPN-ISPSLQPLLLPFSLLLF

AT3G01070.1 early nodulin-like protein 163.4e-2244.62Show/hide
Query:  AVAVAGWLLFGVEGRQPVLHR---VGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKS
        AV VAG +L  +     V  +   VG  K+ W  NIN+T W+  +HFY+ DWLYF ++++ YNV+EVN+T+Y SCN  + I N ++G GRD+ +L   + 
Subjt:  AVAVAGWLLFGVEGRQPVLHR---VGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKS

Query:  YYFLSGR-GFCFQGMKVSVFVEESPPILPP
        YY +SG  G C+ GMK++V VE+ PP  PP
Subjt:  YYFLSGR-GFCFQGMKVSVFVEESPPILPP

AT4G12880.1 early nodulin-like protein 194.7e-2452.83Show/hide
Query:  GGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPI
        G K  W  NIN+T W+  +HFYVGDWLYF F +  +N+LEVNK  YE C     I N T+G GRD+  L E + YY L GRG C QGMK+ V V E+PP 
Subjt:  GGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPI

Query:  LPPNLP
         PP  P
Subjt:  LPPNLP

AT4G12880.2 early nodulin-like protein 191.4e-1247.67Show/hide
Query:  FYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLP
        F+    L F F +  +N+LEVNK  YE C     I N T+G GRD+  L E + YY L GRG C QGMK+ V V E+PP  PP  P
Subjt:  FYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSYYFLSGRGFCFQGMKVSVFVEESPPILPPNLP

AT5G15350.1 early nodulin-like protein 171.9e-2542.68Show/hide
Query:  VAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSY
        + AV +A  +   + G     + VG  K+ W  NIN+T W+  +HFY+GDWLYF FD++ +N+LEVNKT YE C     I N T+G GRD+  L + K Y
Subjt:  VAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKG-GRDVFNLTEAKSY

Query:  YFLSGRGFCFQGMKVSVFVEESPPILPP------NLPNIS--PSLQPLLLPFSLLLF
        Y L G+G C+ GMK+SV VE+ PP  PP      N+ ++S    L   ++P SL  F
Subjt:  YFLSGRGFCFQGMKVSVFVEESPPILPP------NLPNIS--PSLQPLLLPFSLLLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGGATGGCGGCAGAGAAGGTGGCAACGACCGTGGCGGCGGTGGCAGTGGCTGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTTTTGCATAGAGTTGG
AGGAGGAAAATATACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTCTATTTTGGGTTCGATAAACACATCTACA
ACGTGTTGGAAGTGAACAAGACGAGCTACGAGAGTTGTAACGAGAAGGATTTCATTTTCAACATAACAAAAGGAGGGAGAGATGTATTCAATTTAACAGAAGCAAAATCA
TACTACTTTCTAAGTGGAAGAGGGTTTTGCTTTCAAGGAATGAAGGTTTCTGTTTTTGTTGAAGAGTCTCCTCCAATTTTACCACCCAATTTACCTAATATTTCTCCATC
TTTACAACCATTATTATTGCCTTTCTCCCTCTTGCTATTCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGGATGGCGGCAGAGAAGGTGGCAACGACCGTGGCGGCGGTGGCAGTGGCTGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTTTTGCATAGAGTTGG
AGGAGGAAAATATACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTCTATTTTGGGTTCGATAAACACATCTACA
ACGTGTTGGAAGTGAACAAGACGAGCTACGAGAGTTGTAACGAGAAGGATTTCATTTTCAACATAACAAAAGGAGGGAGAGATGTATTCAATTTAACAGAAGCAAAATCA
TACTACTTTCTAAGTGGAAGAGGGTTTTGCTTTCAAGGAATGAAGGTTTCTGTTTTTGTTGAAGAGTCTCCTCCAATTTTACCACCCAATTTACCTAATATTTCTCCATC
TTTACAACCATTATTATTGCCTTTCTCCCTCTTGCTATTCATCTAA
Protein sequenceShow/hide protein sequence
MFGMAAEKVATTVAAVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNEKDFIFNITKGGRDVFNLTEAKS
YYFLSGRGFCFQGMKVSVFVEESPPILPPNLPNISPSLQPLLLPFSLLLFI