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Lsi06G004470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G004470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPolyketide cyclase/dehydrase and lipid transport superfamily protein
Genome locationchr06:4886676..4892486
RNA-Seq ExpressionLsi06G004470
SyntenyLsi06G004470
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8009193.1 hypothetical protein BT93_J0241 [Corymbia citriodora subsp. variegata]5.3e-0790.32Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIY
        MAEWSKAPDSSSGPRERAWVQIPLLTF +I+
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIY
KAF8041172.1 hypothetical protein BT93_B3178 [Corymbia citriodora subsp. variegata]6.2e-0890.91Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNF
        MAEWSKAPDSSSGPRERAWVQIPLLTFF+ Y F
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNF
KAG8661860.1 hypothetical protein MANES_01G051334v8 [Manihot esculenta]8.2e-0858.93Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNFQRGRMTTNMEYDAPKMAEWSKAP
        MAEWSKAPDSSSGPRERAWVQIPLLTF + + F     T  M      M +W   P
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNFQRGRMTTNMEYDAPKMAEWSKAP
KRG98426.1 hypothetical protein GLYMA_18G073000v4 [Glycine max]2.4e-0787.5Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYN
        MAEWSKAPDSSSGPRERAWVQIPLLT  +I+N
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYN
TYI58211.1 hypothetical protein E1A91_D11G339100v1 [Gossypium mustelinum]6.9e-0787.88Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNF
        MAEWSKAPDSSSGPRERAWVQIPLLTF   Y F
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNF
TrEMBL top hitse value%identityAlignment
A0A0R0F7X2 Uncharacterized protein1.1e-0787.5Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYN
        MAEWSKAPDSSSGPRERAWVQIPLLT  +I+N
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYN
A0A151UAJ3 Uncharacterized protein3.3e-0793.33Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYI
        MAEWSKAPDSSSGPRERAWVQIPLLTF+ I
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYI
A0A5D2SZ22 Uncharacterized protein3.3e-0787.88Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNF
        MAEWSKAPDSSSGPRERAWVQIPLLTF   Y F
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNF
A0A5J5SK90 Uncharacterized protein3.3e-0793.33Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYI
        MAEWSKAPDSSSG RERAWVQIPLLTF+YI
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYI
E0CUX8 Uncharacterized protein3.3e-07100Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFF
        MAEWSKAPDSSSGPRERAWVQIPLLTFF
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64130.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein6.9e-0537.5Show/hide
Query:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNFQRGRMT-TNMEYDAPKMAEWSKAPDSSSGLR
        MAEWSKAPDSSSG R+RAW++           +QR  MT  +++++   M +    P+   G +
Subjt:  MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNFQRGRMT-TNMEYDAPKMAEWSKAPDSSSGLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACATTTTTTTATATTTATAATTTCCAACGTGGGAG
AATGACAACTAATATGGAGTATGATGCACCCAAGATGGCTGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGGTTCATATCCCATTTCTGA
CAAATGAAATAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACATTTTTTTATATTTATAATTTCCAACGTGGGAG
AATGACAACTAATATGGAGTATGATGCACCCAAGATGGCTGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGGTTCATATCCCATTTCTGA
CAAATGAAATAAAATAG
Protein sequenceShow/hide protein sequence
MAEWSKAPDSSSGPRERAWVQIPLLTFFYIYNFQRGRMTTNMEYDAPKMAEWSKAPDSSSGLRERAWVHIPFLTNEIK