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Lsi06G004550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G004550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA (Cytosine-5)-methyltransferase CMT3-like
Genome locationchr06:5047262..5048407
RNA-Seq ExpressionLsi06G004550
SyntenyLsi06G004550
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653489.1 hypothetical protein Csa_006929, partial [Cucumis sativus]4.4e-2491.78Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSL G  GGYN+NHS
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS

KAG6588160.1 hypothetical protein SDJN03_16725, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2172.41Show/hide
Query:  MATFSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSL--GGGGGGYNSNHSHNHSA
        MA ++R     S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV++SPLLLVV VHWLSL  GGGGGG NS +SHN +A
Subjt:  MATFSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSL--GGGGGGYNSNHSHNHSA

XP_011660097.1 uncharacterized protein LOC105436341 [Cucumis sativus]4.4e-2491.78Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSL G  GGYN+NHS
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS

XP_015957774.2 uncharacterized protein LOC107481931 [Arachis duranensis]3.3e-1159.09Show/hide
Query:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLG
        +S +RSSS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+VISPLLL++ VHWLS G
Subjt:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLG

XP_022157357.1 uncharacterized protein LOC111024080 [Momordica charantia]1.5e-1679.66Show/hide
Query:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGG
        S+QWLLAT+ALI FGFLAYA+YDAAVAS +E+FQR+VV+SPLLLVVAVHWLS+GGG  G
Subjt:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGG

TrEMBL top hitse value%identityAlignment
A0A0A0M2K2 Uncharacterized protein2.1e-2491.78Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSL G  GGYN+NHS
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS

A0A444ZSA4 Uncharacterized protein1.6e-1159.09Show/hide
Query:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLG
        +S +RSSS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+VISPLLL++ VHWLS G
Subjt:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLG

A0A4P1R3W3 Uncharacterized protein1.6e-1161.54Show/hide
Query:  SRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLG
        S SRS+S  SFS+ WLL     +IFGFL Y VYDA +A+ASE+ QRL+VISPL+L++ VHWLS G
Subjt:  SRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLG

A0A5A7TFN5 DNA (Cytosine-5)-methyltransferase CMT3-like2.1e-2491.78Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSL G  GGYN+NHS
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHS

A0A6J1DUA1 uncharacterized protein LOC1110240807.3e-1779.66Show/hide
Query:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGG
        S+QWLLAT+ALI FGFLAYA+YDAAVAS +E+FQR+VV+SPLLLVVAVHWLS+GGG  G
Subjt:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTTAGCAGATCAAGAAGCTCTTCAAGCTTGAGCTTCTCAGACCAATGGCTTCTTGCAACCATTGCTCTGATAATCTTTGGATTCTTGGCTTATGCTGTTTA
CGACGCTGCTGTTGCCTCGGCTTCGGAGGTGTTCCAAAGGCTCGTCGTCATTTCACCGCTGCTTTTGGTTGTTGCCGTTCACTGGCTATCGCTCGGCGGCGGCGGAGGAG
GATATAATAGCAACCACAGCCACAACCATTCAGCTGGTGCAATTGTCAGTGAATTTCTGACATGTTTTTGGGCTAATTTGTTTGCTAAAAAGTTAGGTGAAGTGGTGTTG
TGTGGAAGCATATTTAGAAAAGTTTCAACCATCATAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTTTTAGCAGATCAAGAAGCTCTTCAAGCTTGAGCTTCTCAGACCAATGGCTTCTTGCAACCATTGCTCTGATAATCTTTGGATTCTTGGCTTATGCTGTTTA
CGACGCTGCTGTTGCCTCGGCTTCGGAGGTGTTCCAAAGGCTCGTCGTCATTTCACCGCTGCTTTTGGTTGTTGCCGTTCACTGGCTATCGCTCGGCGGCGGCGGAGGAG
GATATAATAGCAACCACAGCCACAACCATTCAGCTGGTGCAATTGTCAGTGAATTTCTGACATGTTTTTGGGCTAATTTGTTTGCTAAAAAGTTAGGTGAAGTGGTGTTG
TGTGGAAGCATATTTAGAAAAGTTTCAACCATCATAATGTAATAATGGTTACCATATTGTAAATTTCTAATGGAAAAAAACTTTATATTTAAGAAATATTACTC
Protein sequenceShow/hide protein sequence
MATFSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAGAIVSEFLTCFWANLFAKKLGEVVL
CGSIFRKVSTIIM