; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G004840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G004840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRho GTPase-activating gacO-like protein
Genome locationchr06:5589710..5590126
RNA-Seq ExpressionLsi06G004840
SyntenyLsi06G004840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590227.1 hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6094.2Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMKSPPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_004149029.1 uncharacterized protein LOC101218566 [Cucumis sativus]7.0e-6397.83Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMK+PPAAENGKRRRRNSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_022960708.1 uncharacterized protein LOC111461426 [Cucurbita moschata]4.3e-6093.48Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMKSPPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_023516906.1 uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]5.1e-6194.93Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIED+DSEN+KG DIVSKEMKSPPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_038879962.1 uncharacterized protein LOC120071662 [Benincasa hispida]2.4e-6398.55Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDD GSGEEEKIP QKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

TrEMBL top hitse value%identityAlignment
A0A0A0LXE8 Uncharacterized protein3.4e-6397.83Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMK+PPAAENGKRRRRNSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A1S3BRW6 uncharacterized protein LOC1034925113.4e-6397.83Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMK+PPAAENGKRRRRNSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A5A7TJZ9 Uncharacterized protein3.4e-6397.83Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMK+PPAAENGKRRRRNSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A6J1H9S1 uncharacterized protein LOC1114614262.1e-6093.48Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMKSPPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A6J1JCI2 uncharacterized protein LOC1114855343.5e-6092.75Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        MGRGRGKGRKLT+TNHDD GSGEEEKIPAQKRRGRPQKPLKDE+DEEEAEKIED+DSEN+KG DIVSKEMK PPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42190.1 unknown protein3.1e-2450.68Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE---------KIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEK
        M RGRGKG+K   +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE E         ++EDED E   GS + SK++         K R+R       
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE---------KIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEK

Query:  LDPVKDENGDGTRSSTDESTRSN--GFRHNGSRRKSKPRRAAEAGVNC
         D  ++ENG G++ +TD+STRS   GFR NGSRRKSKPRRAAEA V C
Subjt:  LDPVKDENGDGTRSSTDESTRSN--GFRHNGSRRKSKPRRAAEAGVNC

AT3G57930.1 unknown protein1.2e-2350.71Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  D            ENG++R++  + KE  +  ++ENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC
         G++SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  DGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC

AT3G57930.2 unknown protein1.2e-2350.71Show/hide
Query:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  D            ENG++R++  + KE  +  ++ENG
Subjt:  MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC
         G++SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  DGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACA
GAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCAC
CTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCA
ACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACA
GAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCAC
CTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCA
ACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA
Protein sequenceShow/hide protein sequence
MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDES
TRSNGFRHNGSRRKSKPRRAAEAGVNCK