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Lsi06G005260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR9-like
Genome locationchr06:6440972..6441417
RNA-Seq ExpressionLsi06G005260
SyntenyLsi06G005260
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590203.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2558.73Show/hide
Query:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSS----STAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTN
        MASKGG  R + +KT  T   + +K KK   + K I   +  EEIE  SS    + A  EE + SSSDFE+C TPKAERF+IPEIKICPPAPKKQR+ +N
Subjt:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSS----STAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTN

Query:  CSLQRPSPIAFFASPDIELFFLFSSQ
        CS Q+PSPI+FFASPDIE+FF  SSQ
Subjt:  CSLQRPSPIAFFASPDIELFFLFSSQ

KAG7022087.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2357.14Show/hide
Query:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKK-------------IKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPA
        MASKGG  RR      T  T  LKK KK +K              I + K+ EE EE    SSS     +E  SSSDFE C TPKA+RFKIPEI+ICPPA
Subjt:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKK-------------IKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPA

Query:  PKKQRLFTNCSLQRPSPIAFFASPDIELFFLFS
        PKKQR  +NCSLQ+ SPIAFFASPDIELFF FS
Subjt:  PKKQRLFTNCSLQRPSPIAFFASPDIELFFLFS

KGN66487.1 hypothetical protein Csa_006949 [Cucumis sativus]1.7e-3171.85Show/hide
Query:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVS--SSDFEQ-------CCTPKAERFKIPEIKICPPAPKKQ
        MASK GEARRRARKTTTT     KK KKNIK   NIKLEEEE E    SS+T  FEE+SVS  S DFE+       C TPKAERFKIPEIKICPPAPKK+
Subjt:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVS--SSDFEQ-------CCTPKAERFKIPEIKICPPAPKKQ

Query:  RLF----TNCSLQRPSPIAFFASPDIELFFLFSSQ
        RLF    +NCSLQRPSPIAFFASPDIELFF FSSQ
Subjt:  RLF----TNCSLQRPSPIAFFASPDIELFFLFSSQ

XP_022154348.1 cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]1.8e-2361.9Show/hide
Query:  MASKGGEARRRAR--KTTTTTTTQLKKKKKNIKKIKNIKLEEEEEE--IEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTN
        MASKGG AR + +  K     + Q  KK+         K +E E E  +E  SSS A+ E ES+ SSD E+CCTPKAERF+IPEIKICPPAPKKQR+F+N
Subjt:  MASKGGEARRRAR--KTTTTTTTQLKKKKKNIKKIKNIKLEEEEEE--IEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTN

Query:  CS-LQRPSPIAFFASPDIELFFLFSS
        CS LQRPSPIAFFASPDIELFF FSS
Subjt:  CS-LQRPSPIAFFASPDIELFFLFSS

XP_023530358.1 cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]1.8e-2356.72Show/hide
Query:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKK--------------IKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPP
        MASKGG  RR      T  T  LKK KK +K               I + K+ EE EE    SSS     +E  SSSDFE C TPKA+RFKIPEI+ICPP
Subjt:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKK--------------IKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPP

Query:  APKKQRLFTNCSLQRPSPIAFFASPDIELFFLFS
        APKKQR  +NCSLQ+ SPIAFFASPDIELFF FS
Subjt:  APKKQRLFTNCSLQRPSPIAFFASPDIELFFLFS

TrEMBL top hitse value%identityAlignment
A0A0A0M041 Uncharacterized protein8.5e-3271.85Show/hide
Query:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVS--SSDFEQ-------CCTPKAERFKIPEIKICPPAPKKQ
        MASK GEARRRARKTTTT     KK KKNIK   NIKLEEEE E    SS+T  FEE+SVS  S DFE+       C TPKAERFKIPEIKICPPAPKK+
Subjt:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVS--SSDFEQ-------CCTPKAERFKIPEIKICPPAPKKQ

Query:  RLF----TNCSLQRPSPIAFFASPDIELFFLFSSQ
        RLF    +NCSLQRPSPIAFFASPDIELFF FSSQ
Subjt:  RLF----TNCSLQRPSPIAFFASPDIELFFLFSSQ

A0A2K1Z353 Uncharacterized protein5.2e-1346.28Show/hide
Query:  RRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFE-------QCCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQR
        R+RAR  T T TT+  + K+   K K+IK     ++    +SST+  +   +   D E        C TPKAERF+IPEI+ CPPAP+KQR+ + CSLQR
Subjt:  RRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFE-------QCCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQR

Query:  PSPIAFFASPDIELFFLFSSQ
          PIAFFA PD+ELFF ++ Q
Subjt:  PSPIAFFASPDIELFFLFSSQ

A0A6J1DK32 cyclin-dependent protein kinase inhibitor SMR9-like8.5e-2461.9Show/hide
Query:  MASKGGEARRRAR--KTTTTTTTQLKKKKKNIKKIKNIKLEEEEEE--IEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTN
        MASKGG AR + +  K     + Q  KK+         K +E E E  +E  SSS A+ E ES+ SSD E+CCTPKAERF+IPEIKICPPAPKKQR+F+N
Subjt:  MASKGGEARRRAR--KTTTTTTTQLKKKKKNIKKIKNIKLEEEEEE--IEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTN

Query:  CS-LQRPSPIAFFASPDIELFFLFSS
        CS LQRPSPIAFFASPDIELFF FSS
Subjt:  CS-LQRPSPIAFFASPDIELFFLFSS

A0A6M2EGF4 Uncharacterized protein1.8e-1346.28Show/hide
Query:  RKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAI-------------FEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTNCSL
        RK T   TT+  + KK + K K+IK     E++   SS+T               FE   +S+S    C TPKAERF+IPEI+ CPPAP+K+R+ +NCSL
Subjt:  RKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAI-------------FEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTNCSL

Query:  QRPSPIAFFASPDIELFFLFS
        QR  PIAFFA PD+ELFF ++
Subjt:  QRPSPIAFFASPDIELFFLFS

B9GF02 Uncharacterized protein1.4e-1346.67Show/hide
Query:  RKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAI------------FEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQ
        RK T   TT+  + KK + K K+IK     E++   SS+T              FE   +S+S    C TPKAERF+IPEI+ CPPAP+K+R+ +NCSLQ
Subjt:  RKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAI------------FEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQ

Query:  RPSPIAFFASPDIELFFLFS
        R  PIAFFA PD+ELFF ++
Subjt:  RPSPIAFFASPDIELFFLFS

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR132.7e-1162.75Show/hide
Query:  CCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFL
        CCTPKA++ +IPE+  CPPAPKKQR+  NC L+R   I FFA P+IELFF+
Subjt:  CCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFL

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR152.5e-0439.68Show/hide
Query:  SVSSSDFEQCC--TPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFLF
        +VS+++ E  C  TP A+  +IP +  CPPAPKK++L    S     P  FF+ PD+E  F++
Subjt:  SVSSSDFEQCC--TPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFLF

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR93.7e-0839.67Show/hide
Query:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQ-CCTPKAERFKIPEIKICPPAPKKQRLFTNCSL
        MASKG   ++  R+TTT      +++K++  K  +       +     S+ST+     + S    E  CCTP  E+ +IPE+  CPPAPKKQ++  NC+L
Subjt:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQ-CCTPKAERFKIPEIKICPPAPKKQRLFTNCSL

Query:  QRPSPIAFFASPDIELFFLFS
        +R   IAFFA PD+ELFF+F+
Subjt:  QRPSPIAFFASPDIELFFLFS

Arabidopsis top hitse value%identityAlignment
AT1G51355.1 unknown protein2.6e-0939.67Show/hide
Query:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQ-CCTPKAERFKIPEIKICPPAPKKQRLFTNCSL
        MASKG   ++  R+TTT      +++K++  K  +       +     S+ST+     + S    E  CCTP  E+ +IPE+  CPPAPKKQ++  NC+L
Subjt:  MASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQ-CCTPKAERFKIPEIKICPPAPKKQRLFTNCSL

Query:  QRPSPIAFFASPDIELFFLFS
        +R   IAFFA PD+ELFF+F+
Subjt:  QRPSPIAFFASPDIELFFLFS

AT1G60783.1 unknown protein1.8e-0539.68Show/hide
Query:  SVSSSDFEQCC--TPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFLF
        +VS+++ E  C  TP A+  +IP +  CPPAPKK++L    S     P  FF+ PD+E  F++
Subjt:  SVSSSDFEQCC--TPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFLF

AT3G20898.1 unknown protein1.9e-1262.75Show/hide
Query:  CCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFL
        CCTPKA++ +IPE+  CPPAPKKQR+  NC L+R   I FFA P+IELFF+
Subjt:  CCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPSPIAFFASPDIELFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGAAGCCTTGTAATATGGCTTCTAAAGGAGGAGAAGCAAGAAGAAGAGCACGAAAAACAACAACAACAACAACAACCCAATTGAAGAAGAAGAAGAAGAACAT
CAAGAAAATCAAGAACATCAAGTTAGAAGAAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCCACAGCCATTTTTGAAGAAGAATCAGTTTCAAGCTCTGATTTTGAAC
AGTGTTGTACTCCAAAAGCAGAGAGATTCAAGATCCCAGAAATCAAAATTTGCCCACCAGCTCCAAAAAAGCAAAGGCTTTTTACAAATTGTTCTTTACAAAGACCTTCT
CCAATTGCCTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCCTCTTCTCATCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGAAGCCTTGTAATATGGCTTCTAAAGGAGGAGAAGCAAGAAGAAGAGCACGAAAAACAACAACAACAACAACAACCCAATTGAAGAAGAAGAAGAAGAACAT
CAAGAAAATCAAGAACATCAAGTTAGAAGAAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCCACAGCCATTTTTGAAGAAGAATCAGTTTCAAGCTCTGATTTTGAAC
AGTGTTGTACTCCAAAAGCAGAGAGATTCAAGATCCCAGAAATCAAAATTTGCCCACCAGCTCCAAAAAAGCAAAGGCTTTTTACAAATTGTTCTTTACAAAGACCTTCT
CCAATTGCCTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCCTCTTCTCATCACAATGA
Protein sequenceShow/hide protein sequence
MEKKPCNMASKGGEARRRARKTTTTTTTQLKKKKKNIKKIKNIKLEEEEEEIEKGSSSTAIFEEESVSSSDFEQCCTPKAERFKIPEIKICPPAPKKQRLFTNCSLQRPS
PIAFFASPDIELFFLFSSQ