; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G005270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr06:6472242..6477194
RNA-Seq ExpressionLsi06G005270
SyntenyLsi06G005270
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022088.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-12887.23Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQ   DPNG PSTSIYYEPWWRG+GYN  PLP+VGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEE DVSKEVQATGSPHSAG+YRQ AQ
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ
        KMQHVSST P MHGECL QSTQLELVGHSIACASNPYQDP YGGMMAFYGHQPL        GYPMVG PHARMPLPIEIAQDPV VNAKQYQGILRRRQ
Subjt:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ

Query:  ARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        ARAKAEAEKKSIKARKVDFPYLHESRHQHAIRR+R SGGRF KKNEADGKEMHSD++NE+G  L+DGS+QQNGSSLTN ASE
Subjt:  ARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]3.0e-13792.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EA+GKE HSDK+NES YRL+DGSEQQNGSSLTNKASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]1.0e-13792.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]1.0e-13792.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]2.0e-13692.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKKNE DGK    DK+NESGYRL++GSEQQNGSSLTN+ASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit1.5e-13792.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EA+GKE HSDK+NES YRL+DGSEQQNGSSLTNKASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A1S3BP85 Nuclear transcription factor Y subunit5.0e-13892.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit5.0e-13892.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit5.0e-13892.86Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQAR

Query:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        AKAEAEKKSIKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  AKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A6J1DK42 Nuclear transcription factor Y subunit1.4e-12786.88Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ
        KMQHVSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPL        GYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQ
Subjt:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ

Query:  ARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        ARAKAEAEKK IKARK   PYLHESRHQHAIRR+R SGGRFAKK+EA+  EMHSDK NESGY L+DGSEQ+NGSS  NKAS+
Subjt:  ARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.8e-2140.21Show/hide
Query:  GSYRQDAQKMQHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNA
        GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY    + +   P  +   H Q   ++G     +PLP +  ++PVFVNA
Subjt:  GSYRQDAQKMQHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNA

Query:  KQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTN
        KQY GILRRRQ+RA+ E++ K IK+RK   PYLHESRH HAIRR R  GGRF    + D  E H D  +E    L  G      SS T+
Subjt:  KQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTN

Q8VY64 Nuclear transcription factor Y subunit A-45.3e-2041.76Show/hide
Query:  TGSPHSAGSYRQD-AQKMQHVSSTLPAMHGECLTQSTQLELV-GHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQD
        T S H      +  A+K +  S T P +     ++S     V    +A    PY DPYY  + A   + P  +    G    ++G     +PL  +  ++
Subjt:  TGSPHSAGSYRQD-AQKMQHVSSTLPAMHGECLTQSTQLELV-GHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQD

Query:  PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKE
        PVFVNAKQY GILRRRQ+RAK EA  ++IKA+K   PY+HESRH HAIRR R  GGRF  AKK   D KE
Subjt:  PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKE

Q93ZH2 Nuclear transcription factor Y subunit A-38.5e-1834.13Show/hide
Query:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQ-------STQLE
        + +   P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++  +   D    + +S    A  G  +TQ         Q  
Subjt:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKA
        + G    H     +N    Y DP+YGG++A  +    P     C+ Q   M+ G   R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ K I+A
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKA

Query:  RKVDFPYLHESRHQHAIRRSRSSGGRF-------AKKNEADGKEMHSDKLNE
        RK   PYLHESRH HA++R R SGGRF        +  +A  +E   DKL +
Subjt:  RKVDFPYLHESRHQHAIRRSRSSGGRF-------AKKNEADGKEMHSDKLNE

Q945M9 Nuclear transcription factor Y subunit A-92.0e-4348.08Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PL F        P  G PH+RMPLP E+AQ+PVFVNAKQYQ IL
Subjt:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK
        RRRQARAKAE EKK IK+RK   PYLHESRHQHA+RR R +GGRFAKK   +  +  +++
Subjt:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK

Q9LXV5 Nuclear transcription factor Y subunit A-18.7e-4746.15Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRR
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ L F        P +G P  R  LP+++AQ+PV+VNAKQY+GILRR
Subjt:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRR

Query:  RQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        R+ARAKAE E+K I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  RQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.4e-4448.08Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PL F        P  G PH+RMPLP E+AQ+PVFVNAKQYQ IL
Subjt:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK
        RRRQARAKAE EKK IK+RK   PYLHESRHQHA+RR R +GGRFAKK   +  +  +++
Subjt:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK

AT5G12840.1 nuclear factor Y, subunit A16.2e-4846.15Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRR
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ L F        P +G P  R  LP+++AQ+PV+VNAKQY+GILRR
Subjt:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRR

Query:  RQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        R+ARAKAE E+K I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  RQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

AT5G12840.2 nuclear factor Y, subunit A11.1e-4747.27Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ L F        P +G P  R  LP+++AQ+PV+VNAKQY+GIL
Subjt:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        RRR+ARAKAE E+K I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

AT5G12840.3 nuclear factor Y, subunit A16.2e-4846.15Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRR
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ L F        P +G P  R  LP+++AQ+PV+VNAKQY+GILRR
Subjt:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRR

Query:  RQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        R+ARAKAE E+K I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  RQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

AT5G12840.4 nuclear factor Y, subunit A11.1e-4747.27Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ L F        P +G P  R  LP+++AQ+PV+VNAKQY+GIL
Subjt:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGIL

Query:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        RRR+ARAKAE E+K I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  RRRQARAKAEAEKKSIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTT
ACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGACGAAG
AAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCAGCTATG
CACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTA
TGGTCATCAGCCCTTGGTATTTTATTTTTGTCATGGACAGGGCTACCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTT
TCGTGAATGCGAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGGTGGATTTTCCATACCTT
CATGAGTCTAGACATCAGCATGCCATTAGAAGGTCGAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAACGAAGCTGATGGGAAGGAGATGCATTCTGATAAATTAAACGA
GAGTGGTTACCGCCTAGATGACGGTTCTGAACAGCAGAATGGAAGCTCCTTGACAAACAAGGCCTCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
TTTCATTTTTGGAATTCACCAAAAGGGATTAAATTTCAAGCTCCCTCTTTTTCTTTTCAACTTTTTTATTTTTTTTTAATTTAATTATTATTATTGTTGTTATTATTTTT
GAATTCTCTCCGATTTCTCTTCTCCCCCATCGGATTTTTCCCCTTTCTCCATTTGGACGTTCCTCCAATTCCTTCCGGGTCTGAAGGTATGCAGTCAAAGTCTGAAACCA
ATAATCAGCTTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTTACCTGTGGTAGGGGGAAATGCT
TCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGACGAAGAAGATGATGTTTCCAAAGAAGT
GCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCAGCTATGCACGGTGAATGTCTGACACAGT
CTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGTCATCAGCCCTTGGTATTT
TATTTTTGTCATGGACAGGGCTACCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAATACCA
AGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGGTGGATTTTCCATACCTTCATGAGTCTAGACATCAGCATG
CCATTAGAAGGTCGAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAACGAAGCTGATGGGAAGGAGATGCATTCTGATAAATTAAACGAGAGTGGTTACCGCCTAGATGAC
GGTTCTGAACAGCAGAATGGAAGCTCCTTGACAAACAAGGCCTCCGAGTAGCGACCTGCACCAGCCACTGGAGGTGAATGCCAAAACAATGGCCAAAATTGGTTGGTGGG
GAGGGATCAATTACTAGTTTGTTAAAAGTATTACCGCATTCCTGGCAAGCATGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGTTGTTCTGAAGAAAAAGAAAAATGA
CTGTGGAATGAAATGTGACTTGCAGGTTCTCATGGCTTCAAAGGAATCCTCAAAAGTCCCAAGTGATTTCTTCATTCCATTCTTTTTTTCTTTTTTTTGCCTTTTTGTAC
AGAGTTTATGAGGACTTAAGGGAGTGGAAACTTTGACCTCTTGTATGATATAGCAGAGTGAAACTAAATGAATCATAAAGCTTAGGATAGATATAGAGATTGTGATTCAC
AAAGCTTACGCTTGAAAGATTTTAGATTTGAGTATCTAAGATTGACAGATTATTGGTGCAAATTATAATTTCCAGGTAAAAAAATGGATGAAGTTTAAATATCTTTCTTC
AGCTTTGATGCCCACTGTAATCTGTGTTCTGTGACTTCTGTTAAACCAGAATTCTCT
Protein sequenceShow/hide protein sequence
MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAM
HGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLVFYFCHGQGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKVDFPYL
HESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE