; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G005460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding family protein
Genome locationchr06:6865743..6875405
RNA-Seq ExpressionLsi06G005460
SyntenyLsi06G005460
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:0010628 - positive regulation of gene expression (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR008111 - RNA-binding motif protein 8
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 - RBM8, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139049.1 RNA-binding protein Y14 [Cucumis sativus]2.7e-10097.97Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+G PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022154366.1 RNA-binding protein Y14A [Momordica charantia]3.9e-9997.97Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022961208.1 RNA-binding protein Y14-like [Cucurbita moschata]3.0e-9996.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022988215.1 RNA-binding protein Y14A-like [Cucurbita maxima]3.3e-9895.94Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLAG PKKTKGRGFR ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_038880227.1 RNA-binding protein Y14A [Benincasa hispida]2.4e-10198.98Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFG+FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

TrEMBL top hitse value%identityAlignment
A0A0A0M2V3 RRM domain-containing protein1.3e-10097.97Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+G PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A1S3BNH9 RNA-binding protein 8A-B1.3e-10097.97Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+G PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1DNH7 RNA-binding protein Y14A1.9e-9997.97Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1HB67 RNA-binding protein Y14-like1.4e-9996.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1JIZ0 RNA-binding protein Y14A-like1.6e-9895.94Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLAG PKKTKGRGFR ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

SwissProt top hitse value%identityAlignment
B7FAL5 RNA-binding protein Y14A2.9e-6567.32Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG--APKKTKGRGFRDE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE
        + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG      G    +KTKGRGFRD+ + R++RLAG    SDFDSL S  GPGP RSIE
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG--APKKTKGRGFRDE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRS-
        GWI+LVTGVHEEAQEDDL N F +FG++KNLHLNLDRRTGFVKGYALIEYE+FEEA+ AI A+DG ELLTQII+VDWAFS+GP++R+N R    RRSRS 
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRS-

Query:  PRRRY
        PRRRY
Subjt:  PRRRY

F4I9J7 RNA-binding protein Y143.8e-6567.96Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFR+E  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

Q5D018 RNA-binding protein 8A3.1e-3857.34Show/hide
Query:  KKTKGRGFRDESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  E    +R+   D+D++ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + F EFGEIKNLHLNLDRRTG++KGYAL+EYE+++EA+ A+
Subjt:  KKTKGRGFRDESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRR
          ++G EL+ Q I+VDW F  GP   K+ R    RRSRSP RR
Subjt:  SAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRR

Q6ATR0 RNA-binding protein Y14B1.2e-3948.77Show/hide
Query:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSD---FDSLKSADGP--GPQRSIE
        A+ DVE VD+   E EE+D MDED           P P + S     +   L G               R+T +  S+   FDSL  A  P  GPQRSIE
Subjt:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSD---FDSLKSADGP--GPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSP
        GWI+LV+GV E+A+EDDL N F +FG +K+LHLNL+RRTG+ KGYAL+EYESFEEA+ AI AM+G +LLT+ + VDWAFS GPI++  +     RRSR+P
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSP

Query:  RRR
         RR
Subjt:  RRR

Q6PH90 RNA-binding protein 8A-B1.1e-3857.34Show/hide
Query:  KKTKGRGFRDESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  +    TR+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFRDESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRR
          ++G +L+ Q ++VDW F  GP   K  R +  RRSRSP RR
Subjt:  SAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRR

Arabidopsis top hitse value%identityAlignment
AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-6667.96Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFR+E  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

AT3G11400.1 eukaryotic translation initiation factor 3G18.9e-0929.92Show/hide
Query:  GASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
        G SS+++ AP   K   +   S R    AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + 
Subjt:  GASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE

Query:  SFEEAEKAISAMDGAELLTQIINVDWA
        S E+A++AI+ ++G      I+ V+WA
Subjt:  SFEEAEKAISAMDGAELLTQIINVDWA

AT3G11400.2 eukaryotic translation initiation factor 3G18.9e-0929.92Show/hide
Query:  GASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
        G SS+++ AP   K   +   S R    AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + 
Subjt:  GASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE

Query:  SFEEAEKAISAMDGAELLTQIINVDWA
        S E+A++AI+ ++G      I+ V+WA
Subjt:  SFEEAEKAISAMDGAELLTQIINVDWA

AT5G64200.1 ortholog of human splicing factor SC351.2e-0831.62Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR

AT5G64200.2 ortholog of human splicing factor SC351.2e-0831.62Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCGCTGATGTAGAGGCTGTCGACTTCGAGCCCGAGGAAGATGACCTCATGGACGAGGATGGAGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCTAA
GCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCACTTGCTGGTGCTCCAAAGAAGACCAAGGGTCGTGGATTTCGAGACGAGTCTGATCGAAACACCCGCCTTGCTG
GGTCGGACTTCGATTCCCTCAAGTCTGCAGATGGCCCTGGCCCCCAACGATCTATTGAAGGATGGATCATTCTGGTGACTGGTGTACATGAAGAGGCACAAGAGGATGAT
CTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGTCGTACTGGGTTCGTCAAGGGATATGCGTTGATCGAATACGAGAGCTTTGA
GGAAGCAGAGAAAGCAATATCTGCCATGGATGGGGCTGAACTTCTGACTCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGC
CTGCTCGAGAACGGCGTTCGAGGAGCCCTAGGAGGAGATACTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAAAAGAAAAATCTAAAAAAATTGGGTTAGCGGGCAAACAAGAAACCCTTGTTTCGATCCCCAAAAACCCCAGCCTTAACCCATCTTCTTCTCGTCCATTTTCCCTC
GCCATTTTGAAGAACCAACGAGGAGCTCTGAGAGACATTGCTTAGCTTACCCATGGCCAGCGCTGATGTAGAGGCTGTCGACTTCGAGCCCGAGGAAGATGACCTCATGG
ACGAGGATGGAGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCTAAGCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCACTTGCTGGTGCTCCAAAGAAG
ACCAAGGGTCGTGGATTTCGAGACGAGTCTGATCGAAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCAGATGGCCCTGGCCCCCAACGATCTATTGA
AGGATGGATCATTCTGGTGACTGGTGTACATGAAGAGGCACAAGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATC
GTCGTACTGGGTTCGTCAAGGGATATGCGTTGATCGAATACGAGAGCTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGGGCTGAACTTCTGACTCAAATTATC
AATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGGCCTGCTCGAGAACGGCGTTCGAGGAGCCCTAGGAGGAGATACTGACTTTGAGGTGTAGA
ACTCCATGTGTGGTGTTTATGGATTTTAATTGGAAGGGTGTTTTCTTGTGGATTGGATTAGGAGATGTTTCTACTGAGCTCTTACTCAATTGTCTCAAGATTCCCCTGGT
TTCCCGCCTTTGTTTCTCGGTCGTTGATGTGGATTGATGAATGTATGTAACTTAGAGGATTTGAGGTTCATGTTTTTCTTTTTTTTTCTTCTTTTTTGGATTACTTGAGG
TTTATGCCTTTTTGTGTTGAATACCTGCTGTTATACATATTTTTTTTGTTCCAAA
Protein sequenceShow/hide protein sequence
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDD
LQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY