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Lsi06G005540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr06:7063827..7064910
RNA-Seq ExpressionLsi06G005540
SyntenyLsi06G005540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025954.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]2.8e-0772.97Show/hide
Query:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        W  KKKG DVDEVE+FHE++FRE  GWINDK KDAY+
Subjt:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
KAA0040145.1 transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]3.6e-0776.47Show/hide
Query:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        KKKG DVDE+E+FHE+HFRE  GWINDK KDAY+
Subjt:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
KAA0056379.1 hypothetical protein E6C27_scaffold186G001230 [Cucumis melo var. makuwa]1.2e-0770.27Show/hide
Query:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        W  KKKG DVDE+E+FHE+HFR+  GWINDK KDAY+
Subjt:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
KAA0063743.1 uncharacterized protein E6C27_scaffold1290G00290 [Cucumis melo var. makuwa]3.6e-0776.47Show/hide
Query:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        KKKG DVDE+E+FHE+HFRE  GWINDK KDAY+
Subjt:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
TYK29140.1 uncharacterized protein E5676_scaffold120G002850 [Cucumis melo var. makuwa]3.6e-0776.47Show/hide
Query:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        KKKG DVDE+E+FHE+HFRE  GWINDK KDAY+
Subjt:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
TrEMBL top hitse value%identityAlignment
A0A5A7SJT9 Formin-like protein 4 isoform X21.3e-0772.97Show/hide
Query:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        W  KKKG DVDEVE+FHE++FRE  GWINDK KDAY+
Subjt:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class1.8e-0776.47Show/hide
Query:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        KKKG DVDE+E+FHE+HFRE  GWINDK KDAY+
Subjt:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
A0A5A7US78 Uncharacterized protein6.0e-0870.27Show/hide
Query:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        W  KKKG DVDE+E+FHE+HFR+  GWINDK KDAY+
Subjt:  WPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
A0A5A7V6L2 Uncharacterized protein1.8e-0776.47Show/hide
Query:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        KKKG DVDE+E+FHE+HFRE  GWINDK KDAY+
Subjt:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
A0A5D3E0V3 Uncharacterized protein1.8e-0776.47Show/hide
Query:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
        KKKG DVDE+E+FHE+HFRE  GWINDK KDAY+
Subjt:  KKKGSDVDEVELFHESHFRENGGWINDKVKDAYV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGTCTGGAACAGGCACAGATGACATTGATTGAAGCTGAACATGCAAACACTCCTGCAGTTGATTCTTCCACTAGGCAAGACGACCCTAGGGCATCATGTATTAA
TATGATATATGTGCTTTTGCCACCAAGTTTGTTTTGGCCATTGAAAAAAAAAGGTAGCGACGTTGACGAGGTGGAGCTATTCCACGAAAGTCATTTTCGTGAAAATGGAG
GATGGATCAATGATAAGGTAAAAGATGCATATGTAAGTTTTATCAAGGCTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACGTCTGGAACAGGCACAGATGACATTGATTGAAGCTGAACATGCAAACACTCCTGCAGTTGATTCTTCCACTAGGCAAGACGACCCTAGGGCATCATGTATTAA
TATGATATATGTGCTTTTGCCACCAAGTTTGTTTTGGCCATTGAAAAAAAAAGGTAGCGACGTTGACGAGGTGGAGCTATTCCACGAAAGTCATTTTCGTGAAAATGGAG
GATGGATCAATGATAAGGTAAAAGATGCATATGTAAGTTTTATCAAGGCTTGGTGA
Protein sequenceShow/hide protein sequence
MVRLEQAQMTLIEAEHANTPAVDSSTRQDDPRASCINMIYVLLPPSLFWPLKKKGSDVDEVELFHESHFRENGGWINDKVKDAYVSFIKAW