CuGenDBv2

Gene ID	Lsi06G005690
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Mitochondrial fission 1 protein
Genome location	chr06:7412806..7417010
RNA-Seq Expression	Lsi06G005690
Synteny	Lsi06G005690
Gene Ontology terms	GO:0000266 - mitochondrial fission (biological process) GO:0000422 - autophagy of mitochondrion (biological process) GO:0016559 - peroxisome fission (biological process) GO:0005779 - integral component of peroxisomal membrane (cellular component) GO:0031307 - integral component of mitochondrial outer membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR016543 - Mitochondria fission 1 protein IPR028058 - Fis1, N-terminal tetratricopeptide repeat

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004139057.1 mitochondrial fission 1 protein A [Cucumis sativus]

2.2e-56

74.12

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKF GSVSNFFSGGDHIPWCD DV+AGCEREAA+AEK SSDELLKESI+RLSWALVHS+QPEDVQRGIAMLEAA+SGDD+PLKMREKLYLLAVGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

XP_008450362.1 PREDICTED: mitochondrial fission 1 protein A [Cucumis melo]

6.4e-56

73.53

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKF GSVSNFFSGGDHIPWCDRDV+AGCEREAA+AEK SS ELLKESI+RLSWALVHS+QPEDV RGIAMLEAA+SGDD+PLKMREKLYLLAVGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

XP_022148930.1 mitochondrial fission 1 protein A-like [Momordica charantia]

1.6e-54

71.18

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        ME+K+ KFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEK S+DE LKESI+RLSWALVHS+QPEDVQRGIAMLEAALS DD+PLKMREKLYLL+VGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGL+AGGIAAAV+RKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

XP_022960826.1 mitochondrial fission 1 protein A-like [Cucurbita moschata]

4.0e-58

75.29

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEKGSSDELLKESI+RLSW+LVHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLL+VGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGL+AGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

XP_038878443.1 mitochondrial fission 1 protein A-like isoform X1 [Benincasa hispida]

1.5e-57

75.88

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKFF SVS+FFSGGDHIPWCDRDVIA CEREAADAEKGSSDELLKESI+RLSWALVHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLLAVGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M2W6 Mitochondrial fission 1 protein

1.1e-56

74.12

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKF GSVSNFFSGGDHIPWCD DV+AGCEREAA+AEK SSDELLKESI+RLSWALVHS+QPEDVQRGIAMLEAA+SGDD+PLKMREKLYLLAVGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

A0A1S3BNG0 Mitochondrial fission 1 protein

3.1e-56

73.53

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKF GSVSNFFSGGDHIPWCDRDV+AGCEREAA+AEK SS ELLKESI+RLSWALVHS+QPEDV RGIAMLEAA+SGDD+PLKMREKLYLLAVGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

A0A6J1D4B4 Mitochondrial fission 1 protein

7.7e-55

71.18

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        ME+K+ KFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEK S+DE LKESI+RLSWALVHS+QPEDVQRGIAMLEAALS DD+PLKMREKLYLL+VGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGL+AGGIAAAV+RKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

A0A6J1H8P1 Mitochondrial fission 1 protein

2.0e-58

75.29

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEKGSSDELLKESI+RLSW+LVHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLL+VGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGL+AGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

A0A6J1JKZ6 Mitochondrial fission 1 protein

2.0e-58

75.29

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEKGSSDELLKESI+RLSW+LVHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLL+VGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        FRSGDYSR                               +GVIGIGI   AATAVGL+AGGIAAAVSRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

SwissProt top hits

e value

%identity

Alignment

Q94CK3 Mitochondrial fission 1 protein B

4.4e-31

47.98

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Query:  MEAKVSKFFGSVSNFFSG-----GDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYL
        M+A + K F SVS+FFSG      D  P CD D+I+GCE+E A+A+    +   KE I+RLSWALVHSK P D+QRGIAMLEA +  D + +K+REKLYL
Subjt:  MEAKVSKFFGSVSNFFSG-----GDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYL

Query:  LAVGYFRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR
        LA+GY+RSGD+SR                               +GVIG+GI   A TAVG++A GIAAA+ R
Subjt:  LAVGYFRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR

Q9M1J1 Mitochondrial fission 1 protein A

5.0e-43

56.47

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        M+AK+ +FF SV  FFSG D IPWCD DVIAGCERE  +A    +++L KE ++RLSWALVHS+Q EDVQRGIAMLEA+L     PL+ REKLYLLAVGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        +RSG+YSR                               +GVIGIGI ATA  AVGL+AGGI AA+SRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

Arabidopsis top hits

e value

%identity

Alignment

AT3G57090.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.5e-44

56.47

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Query:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY
        M+AK+ +FF SV  FFSG D IPWCD DVIAGCERE  +A    +++L KE ++RLSWALVHS+Q EDVQRGIAMLEA+L     PL+ REKLYLLAVGY
Subjt:  MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGY

Query:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK
        +RSG+YSR                               +GVIGIGI ATA  AVGL+AGGI AA+SRKK
Subjt:  FRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK

AT5G12390.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.1e-32

47.98

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Query:  MEAKVSKFFGSVSNFFSG-----GDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYL
        M+A + K F SVS+FFSG      D  P CD D+I+GCE+E A+A+    +   KE I+RLSWALVHSK P D+QRGIAMLEA +  D + +K+REKLYL
Subjt:  MEAKVSKFFGSVSNFFSG-----GDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYL

Query:  LAVGYFRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR
        LA+GY+RSGD+SR                               +GVIG+GI   A TAVG++A GIAAA+ R
Subjt:  LAVGYFRSGDYSR-------------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR

Sequences

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CDS sequence

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ATGGAAGCAAAAGTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGGTTGTGAAAGAGAGGC
TGCTGATGCCGAAAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCG
CAATGCTTGAAGCTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAATGGT
GTGATTGGCATCGGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGA

mRNA sequence

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AGAAAATTGAATCAGTGTTTTCAAATTTCCTACCAAACACGCGCTAAATATTTATCTAAAAAATATCAGGGTAAAACGTGTGAAACAAAACGTTAGTGTAAGTCTTTAGC
TAGTGGTTTCCGTAAAAGCGGAAAAATAAAAAAGAAACAAAACAGGGTTCCGCGTTACTTGAAATAGCGACAACGCAGAAGAAGATTAGCAGAGAAAAATGGAAGCAAAA
GTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGGTTGTGAAAGAGAGGCTGCTGATGCCGA
AAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCGCAATGCTTGAAG
CTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAATGGTGTGATTGGCATC
GGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGAGTTAATTACTTGCTTTGTATATAAGAGATGGT
CTGATCAAATCCTGTTTTAGAGTTGCTATACTTAAAAAGCTTAATATGTACAATGCGATTTAGCTATTAACAATGTTTGTTCTGTTATATTGATCTATTTTACATTGTAA
AAATACGATGTTATGTACTTTGTCCTGCATTGGTAGTTTATTTGAGATTGTCCAAATTCTTTCTAATTGATTTTGGGGAGTTGAGCAAAAGCATTACGAAAACTTTGGGG
AAAAATTATTCAAAATGACC

Protein sequence

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MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSRNG
VIGIGIAATAATAVGLLAGGIAAAVSRKK

Lsi06G005690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome