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Lsi06G005800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:7755351..7755623
RNA-Seq ExpressionLsi06G005800
SyntenyLsi06G005800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588222.1 hypothetical protein SDJN03_16787, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2070.33Show/hide
Query:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVA--VLQRSKNPAGQEGSGASHFPQLPKTPPS
        MPRPRH RQ SQVLPP+LISGEDP+QILDF R  AGA SGQPHQA+  +A AAA AA A A  V+Q+SK  A QE SGA  FPQL KTPPS
Subjt:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVA--VLQRSKNPAGQEGSGASHFPQLPKTPPS

KAG6590166.1 hypothetical protein SDJN03_15589, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2371.74Show/hide
Query:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQE--GSGASHFPQLPKTPPST
        MPRPRHQRQ SQVLPP+LISG DP+QILDFG+  A  VSGQPH+A+EA+ N     ATA AVLQRSK   GQE  GSG+ HFPQLPKTPPST
Subjt:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQE--GSGASHFPQLPKTPPST

KGN66547.1 hypothetical protein Csa_007065 [Cucumis sativus]3.7e-2882.22Show/hide
Query:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQEGSGASHFPQLPKTPPST
        MPRPRHQRQLSQVLPPD IS EDP+QILDF  G AGAVSGQPHQ S+A+ANAAA AA A  VLQRSKNPAGQEGSGA HF QLPKT PST
Subjt:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQEGSGASHFPQLPKTPPST

TrEMBL top hitse value%identityAlignment
A0A0A0M0A1 Uncharacterized protein1.8e-2882.22Show/hide
Query:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQEGSGASHFPQLPKTPPST
        MPRPRHQRQLSQVLPPD IS EDP+QILDF  G AGAVSGQPHQ S+A+ANAAA AA A  VLQRSKNPAGQEGSGA HF QLPKT PST
Subjt:  MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQEGSGASHFPQLPKTPPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGGCCGCGACACCAACGTCAGCTCTCTCAAGTTCTTCCGCCGGACCTGATCTCCGGCGAAGATCCGGCTCAGATCTTGGACTTCGGCAGGGGAGCCGCCGGAGC
AGTTTCCGGCCAACCCCATCAGGCATCTGAAGCTTCTGCAAATGCGGCTGCCACCGCCGCCACCGCCGTCGCCGTACTTCAGCGGTCCAAGAATCCCGCCGGTCAGGAAG
GCTCCGGCGCCAGCCACTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGGCCGCGACACCAACGTCAGCTCTCTCAAGTTCTTCCGCCGGACCTGATCTCCGGCGAAGATCCGGCTCAGATCTTGGACTTCGGCAGGGGAGCCGCCGGAGC
AGTTTCCGGCCAACCCCATCAGGCATCTGAAGCTTCTGCAAATGCGGCTGCCACCGCCGCCACCGCCGTCGCCGTACTTCAGCGGTCCAAGAATCCCGCCGGTCAGGAAG
GCTCCGGCGCCAGCCACTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTGA
Protein sequenceShow/hide protein sequence
MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQEGSGASHFPQLPKTPPST