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Lsi06G005840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:7868320..7876827
RNA-Seq ExpressionLsi06G005840
SyntenyLsi06G005840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON75744.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_040040 [Parasponia andersonii]1.0e-1258.57Show/hide
Query:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
        K+S   +LH +++ +LPL+LDE+ D++GLEQARDMG  EAVE+  +  + LEL  H+QTLLAHLLLPPPY
Subjt:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
PON97589.1 hypothetical protein TorRG33x02_064990 [Trema orientale]3.7e-1561.43Show/hide
Query:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
        K+S   +LH ++D +LPL+LDE+ D++GLEQARDMG  EAVE+  +G + LEL  H+QTLLAHLLLPPPY
Subjt:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
TrEMBL top hitse value%identityAlignment
A0A2P5DR33 Uncharacterized protein4.9e-1358.57Show/hide
Query:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
        K+S   +LH +++ +LPL+LDE+ D++GLEQARDMG  EAVE+  +  + LEL  H+QTLLAHLLLPPPY
Subjt:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
A0A2P5FIG8 Uncharacterized protein1.8e-1561.43Show/hide
Query:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
        K+S   +LH ++D +LPL+LDE+ D++GLEQARDMG  EAVE+  +G + LEL  H+QTLLAHLLLPPPY
Subjt:  KQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAAGCGGGTTGATTGTCTGGGAGGAAGCATCCAGCCGATTTGACTGGGCACAGGTTGAACTGAAGCAATCTCTGAGGGCAGACCTTCATGCACAGAAAGATCT
GATTCTGCCTCTGAAGCTCGACGAGAACAGCGACAAGGTCGGACTTGAGCAAGCGAGAGACATGGGTGGAAATGAAGCGGTCGAGGCGAATGAAATTGGACTGAAGCCTC
TTGAGCTCTTTGACCACAATCAGACCCTCCTTGCCCATCTCCTTCTTCCTCCTCCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAAGCGGGTTGATTGTCTGGGAGGAAGCATCCAGCCGATTTGACTGGGCACAGGTTGAACTGAAGCAATCTCTGAGGGCAGACCTTCATGCACAGAAAGATCT
GATTCTGCCTCTGAAGCTCGACGAGAACAGCGACAAGGTCGGACTTGAGCAAGCGAGAGACATGGGTGGAAATGAAGCGGTCGAGGCGAATGAAATTGGACTGAAGCCTC
TTGAGCTCTTTGACCACAATCAGACCCTCCTTGCCCATCTCCTTCTTCCTCCTCCATATTGA
Protein sequenceShow/hide protein sequence
MAKSGLIVWEEASSRFDWAQVELKQSLRADLHAQKDLILPLKLDENSDKVGLEQARDMGGNEAVEANEIGLKPLELFDHNQTLLAHLLLPPPY