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Lsi06G005920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 9
Genome locationchr06:8100664..8100903
RNA-Seq ExpressionLsi06G005920
SyntenyLsi06G005920
Gene Ontology termsGO:0007154 - cell communication (biological process)
GO:0023052 - signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]5.7e-1760Show/hide
Query:  MIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEE----VASTSPAMSPNAE
        MI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANPYQRGC+ I+RCR GNDIID  EE     AS SP++SPN E
Subjt:  MIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEE----VASTSPAMSPNAE

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]1.6e-1465.08Show/hide
Query:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV
        MIE+TNA  YI Y  +K D+SPGCS KHP LCKL  AN YQRGCSAINRCR  +D ID  E++
Subjt:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]6.1e-1966.67Show/hide
Query:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV
        MI++TNAT +I YDP++GD+SPGCS  HPELCKL  ANPY+RGC++I+RCRGG+DIID  E +
Subjt:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]1.8e-1550Show/hide
Query:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVEEVASTS------------------PAMSPNAEL
        MIE+TNAT YI YDP+K +    CS  HP+LCK TPANPYQRGC+ I+RCRG   +DIID  EE  + +                  PA+SPN EL
Subjt:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVEEVASTS------------------PAMSPNAEL

XP_023546462.1 protein RALF-like 9 [Cucurbita pepo subsp. pepo]4.5e-1448.96Show/hide
Query:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVEEVASTS-------------------PAMSPNAE
        MIE+TNAT YI YDP+K +    CS  HP+LCK  PANPYQRGC+ I+RCRG   +DIID  EE   T+                   PA+SPN E
Subjt:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVEEVASTS-------------------PAMSPNAE

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein2.8e-1760Show/hide
Query:  MIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEE----VASTSPAMSPNAE
        MI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANPYQRGC+ I+RCR GNDIID  EE     AS SP++SPN E
Subjt:  MIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEE----VASTSPAMSPNAE

A0A6J1C8U5 uncharacterized protein LOC1110084957.5e-1565.08Show/hide
Query:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV
        MIE+TNA  YI Y  +K D+SPGCS KHP LCKL  AN YQRGCSAINRCR  +D ID  E++
Subjt:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV

A0A6J1DYH7 uncharacterized protein LOC1110257773.0e-1966.67Show/hide
Query:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV
        MI++TNAT +I YDP++GD+SPGCS  HPELCKL  ANPY+RGC++I+RCRGG+DIID  E +
Subjt:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV

A0A6J1HAJ8 protein RALF-like 98.9e-1650Show/hide
Query:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVEEVASTS------------------PAMSPNAEL
        MIE+TNAT YI YDP+K +    CS  HP+LCK TPANPYQRGC+ I+RCRG   +DIID  EE  + +                  PA+SPN EL
Subjt:  MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVEEVASTS------------------PAMSPNAEL

A0A6J1JNY3 auxin-induced in root cultures protein 12-like2.0e-1263.64Show/hide
Query:  DYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV
        ++I YD IK D+SPGCS KHP LCK   AN YQRGC+AIN+CR G+DII+ VE++
Subjt:  DYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEV

SwissProt top hitse value%identityAlignment
A8MQL7 Protein RALF-like 204.0e-0543.75Show/hide
Query:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG
        T     IG   ++ D   GC    P  CK+ PANPY+ GC A  RCRG
Subjt:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG

A8MQM2 Protein RALF-like 67.3e-0752.38Show/hide
Query:  YIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        YI Y+ +KGDI PGCS K+P+ C   PA  Y RGC    RC+
Subjt:  YIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

A8MQM7 Protein RALF-like 153.6e-0652.17Show/hide
Query:  ATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        AT YI Y  +  GD +  C K HP  CK   ANPY+RGC  I RCR
Subjt:  ATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

A8MR00 Protein RALF-like 361.0e-0542.86Show/hide
Query:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        T   + IG   ++ D+  GC+      CK+ PANPY+ GC A  RCRGG
Subjt:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

Q3ECL0 Protein RALF-like 92.7e-0960.42Show/hide
Query:  ATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        AT YI Y  I +GD +  C K HP  CK   ANPYQRGC  INRCRGG
Subjt:  ATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 65.2e-0852.38Show/hide
Query:  YIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        YI Y+ +KGDI PGCS K+P+ C   PA  Y RGC    RC+
Subjt:  YIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

AT1G61566.1 ralf-like 91.9e-1060.42Show/hide
Query:  ATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        AT YI Y  I +GD +  C K HP  CK   ANPYQRGC  INRCRGG
Subjt:  ATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

AT2G22055.1 RALF-like 152.6e-0752.17Show/hide
Query:  ATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        AT YI Y  +  GD +  C K HP  CK   ANPY+RGC  I RCR
Subjt:  ATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

AT2G32885.1 Rapid alkalinization factor (RALF) family protein7.5e-0742.86Show/hide
Query:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        T   + IG   ++ D+  GC+      CK+ PANPY+ GC A  RCRGG
Subjt:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

AT2G34825.1 RALF-like 202.8e-0643.75Show/hide
Query:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG
        T     IG   ++ D   GC    P  CK+ PANPY+ GC A  RCRG
Subjt:  TNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAATTAACTCCTGC
AAATCCATATCAAAGAGGTTGCAGTGCAATCAATCGTTGCAGAGGAGGAAATGATATTATAGATGGTGTAGAAGAGGTTGCATCCACTAGCCCCGCAATGAGCCCTAATG
CAGAACTGCATCTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAATTAACTCCTGC
AAATCCATATCAAAGAGGTTGCAGTGCAATCAATCGTTGCAGAGGAGGAAATGATATTATAGATGGTGTAGAAGAGGTTGCATCCACTAGCCCCGCAATGAGCCCTAATG
CAGAACTGCATCTTCATTGA
Protein sequenceShow/hide protein sequence
MIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEEVASTSPAMSPNAELHLH