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Lsi06G005940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G005940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 9
Genome locationchr06:8126501..8130390
RNA-Seq ExpressionLsi06G005940
SyntenyLsi06G005940
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]8.1e-2463.27Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDG----VEDVASTSPAMSPN
        M MSK +TLVFIGILLV+FDMI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANPYQRGC+ I+RCR GNDIID     +E  AS SP++SPN
Subjt:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDG----VEDVASTSPAMSPN

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]1.6e-1965.06Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEDV
        M   KG  LVFIGILLV+F MIE+TNA  YI Y  +K D+SPGCS KHP LCKL  AN YQRGCSAINRCR  +D ID  E +
Subjt:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEDV

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]1.5e-2262.96Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVE
        M +SKG   +F+GILL    MI++TNAT +I YDP++GD+SPGCS  HPELCKL  ANPY+RGC++I+RCRGG+DIID  E
Subjt:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVE

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]3.9e-1858.54Show/hide
Query:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVED
        MSKG  ++FI +L V+ +MIE+TNAT YI YDP+K +    CS  HP+LCK TPANPYQRGC+ I+RCRG   +DIID  E+
Subjt:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVED

XP_023546462.1 protein RALF-like 9 [Cucurbita pepo subsp. pepo]3.1e-1556.58Show/hide
Query:  LVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVED
        ++FI +L V+ +MIE+TNAT YI YDP+K +    CS  HP+LCK  PANPYQRGC+ I+RCRG   +DIID  E+
Subjt:  LVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVED

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein3.9e-2463.27Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDG----VEDVASTSPAMSPN
        M MSK +TLVFIGILLV+FDMI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANPYQRGC+ I+RCR GNDIID     +E  AS SP++SPN
Subjt:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDG----VEDVASTSPAMSPN

A0A6J1C8U5 uncharacterized protein LOC1110084957.6e-2065.06Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEDV
        M   KG  LVFIGILLV+F MIE+TNA  YI Y  +K D+SPGCS KHP LCKL  AN YQRGCSAINRCR  +D ID  E +
Subjt:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEDV

A0A6J1DYH7 uncharacterized protein LOC1110257777.4e-2362.96Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVE
        M +SKG   +F+GILL    MI++TNAT +I YDP++GD+SPGCS  HPELCKL  ANPY+RGC++I+RCRGG+DIID  E
Subjt:  MTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVE

A0A6J1FQ53 auxin-induced in root cultures protein 12-like9.0e-1346.84Show/hide
Query:  MMTMSKGITLVFIGILLVNFDMIEVTNA-TDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDII
        +M +S    LV  G L +  DM+ +TNA  + I Y+ I+ D+SPGC+ KHP LC+   ANPY+RGC+AIN+CRG   ++
Subjt:  MMTMSKGITLVFIGILLVNFDMIEVTNA-TDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDII

A0A6J1HAJ8 protein RALF-like 91.9e-1858.54Show/hide
Query:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVED
        MSKG  ++FI +L V+ +MIE+TNAT YI YDP+K +    CS  HP+LCK TPANPYQRGC+ I+RCRG   +DIID  E+
Subjt:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRG--GNDIIDGVED

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 61.6e-0636.92Show/hide
Query:  ITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        I + F+ ++++            YI Y+ +KGDI PGCS K+P+ C   PA  Y RGC    RC+
Subjt:  ITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

A8MQM7 Protein RALF-like 155.4e-0744.59Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        M MSK I  V + + L+ F  +  T   AT YI Y  +  GD +  C K HP  CK   ANPY+RGC  I RCR
Subjt:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

A8MQP2 Protein RALF-like 294.6e-0642.25Show/hide
Query:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELC--KLTPANPYQRGCSAINRCR
        M K   + F+ IL+V    I   +A  YI Y PI+ D+  GC  + P     K TPANPY+R C+  NRCR
Subjt:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELC--KLTPANPYQRGCSAINRCR

A8MR00 Protein RALF-like 361.3e-0536.36Show/hide
Query:  TLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        T+V    L++   ++  T   + IG   ++ D+  GC+      CK+ PANPY+ GC A  RCRGG
Subjt:  TLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

Q3ECL0 Protein RALF-like 94.0e-1051.32Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        M MSK I  V + + LV F  +  T   AT YI Y  I +GD +  C K HP  CK   ANPYQRGC  INRCRGG
Subjt:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 61.1e-0736.92Show/hide
Query:  ITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        I + F+ ++++            YI Y+ +KGDI PGCS K+P+ C   PA  Y RGC    RC+
Subjt:  ITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

AT1G61566.1 ralf-like 92.9e-1151.32Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        M MSK I  V + + LV F  +  T   AT YI Y  I +GD +  C K HP  CK   ANPYQRGC  INRCRGG
Subjt:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

AT2G22055.1 RALF-like 153.9e-0844.59Show/hide
Query:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR
        M MSK I  V + + L+ F  +  T   AT YI Y  +  GD +  C K HP  CK   ANPY+RGC  I RCR
Subjt:  MTMSKGITLVFIGILLVNFDMIEVT--NATDYIGYDPIK-GDISPGCSKKHPELCKLTPANPYQRGCSAINRCR

AT2G32885.1 Rapid alkalinization factor (RALF) family protein9.5e-0736.36Show/hide
Query:  TLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG
        T+V    L++   ++  T   + IG   ++ D+  GC+      CK+ PANPY+ GC A  RCRGG
Subjt:  TLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGG

AT4G11653.1 RALF-like 293.3e-0742.25Show/hide
Query:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELC--KLTPANPYQRGCSAINRCR
        M K   + F+ IL+V    I   +A  YI Y PI+ D+  GC  + P     K TPANPY+R C+  NRCR
Subjt:  MSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELC--KLTPANPYQRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGATTTTGTTATCAATGATGACCATGTCAAAGGGAATCACACTTGTTTTTATCGGGATTCTCTTGGTTAACTTTGACATGATTGAGGTAACAAATGCAACAGATTA
CATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAACTAACTCCTGCAAATCCATATCAAAGAGGCTGCAGTGCAA
TCAATCGTTGCAGAGGAGGAAATGATATTATAGATGGTGTAGAAGATGTTGCATCCACTAGCCCCGCAATGAGCCCTAATGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGATTTTGTTATCAATGATGACCATGTCAAAGGGAATCACACTTGTTTTTATCGGGATTCTCTTGGTTAACTTTGACATGATTGAGGTAACAAATGCAACAGATTA
CATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAACTAACTCCTGCAAATCCATATCAAAGAGGCTGCAGTGCAA
TCAATCGTTGCAGAGGAGGAAATGATATTATAGATGGTGTAGAAGATGTTGCATCCACTAGCCCCGCAATGAGCCCTAATGCATAA
Protein sequenceShow/hide protein sequence
MWILLSMMTMSKGITLVFIGILLVNFDMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCSAINRCRGGNDIIDGVEDVASTSPAMSPNA