CuGenDBv2

Gene ID	Lsi06G006180
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr06:8691045..8691632
RNA-Seq Expression	Lsi06G006180
Synteny	Lsi06G006180
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577133.1 hypothetical protein SDJN03_24707, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-88

85.35

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLPISE LDAGKSYFLLPLSRAA+K +SD  E     DL SGS
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT
        GLEVLP GG+G+WRVKLVIDTKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG NNNKAQIKDF SGNGCLYAT
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

XP_022931435.1 uncharacterized protein LOC111437614 [Cucurbita moschata]

5.2e-88

84.85

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLPISE LDAGKSYFLLPLSRA +K +SD  E     DL SGS
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT
        GLEVLP GG+G+WRVKLVIDTKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG NNNKAQIKDF SGNGCLYAT
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

XP_022985422.1 uncharacterized protein LOC111483432 [Cucurbita maxima]

1.1e-88

84.34

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAA+K +SD      + DL +GS
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT
        GLEVLP GG+G+WRVKLVIDTKQLGEILAE+GNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KFFPIDVG NNNKAQ+KDF SGNGCLYAT
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

XP_023522023.1 uncharacterized protein LOC111785895 [Cucurbita pepo subsp. pepo]

1.1e-88

84.85

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAA+K +SD  E     DL +GS
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT
        GLEVLP GG+G+WRVKLVIDTKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG N+NKAQIKDF SGNGCLYAT
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

XP_038907067.1 uncharacterized protein LOC120092893 [Benincasa hispida]

1.2e-95

91.24

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGE-QPPSKDLGSG
        MGNCSLKGM VDCEKPIRILTDSGNII+FHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSR ADKVQ+DDGE  PP K+LGSG
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGE-QPPSKDLGSG

Query:  SGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAAAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLY
        SGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIER+RAAAA +SP+RGKIGGWK TWGN  KFFPIDVG NNNKAQIKDFD+GNGCLY
Subjt:  SGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAAAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYF7 Uncharacterized protein

8.2e-87

85.19

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKGMAVDCEKPIRILTDSG+II+FHGPKQVHQILNNYPPG+YGVFRRPNLSSPLP+SEPLDAGKSYFLLPLS++ +  +S     PPSKD+GS S
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFD
        GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIER+RAA   AAVQSPRRGKIGGWKP WGNWFKFFPIDVG N+NKAQ+K F+
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFD

A0A1S3BTS2 uncharacterized protein LOC103493080

1.9e-83

83.68

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKGMAVDC KPIRILTDSG+II+FHGPKQVHQILNNYPPG+YGVFRRPNLSSPLP SEPLDAGKSYFLLPLS+  +  +S      PSKDLGS S
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDS
        GLEVLPA GNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA   AAVQSPRRGKI GWKP WGNW KFFP+D G NNNKAQIK+F+S
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDS

A0A5A7TTS6 Uncharacterized protein

1.9e-83

83.68

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKGMAVDC KPIRILTDSG+II+FHGPKQVHQILNNYPPG+YGVFRRPNLSSPLP SEPLDAGKSYFLLPLS+  +  +S      PSKDLGS S
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDS
        GLEVLPA GNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA   AAVQSPRRGKI GWKP WGNW KFFP+D G NNNKAQIK+F+S
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDS

A0A6J1EZE8 uncharacterized protein LOC111437614

2.5e-88

84.85

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLPISE LDAGKSYFLLPLSRA +K +SD  E     DL SGS
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT
        GLEVLP GG+G+WRVKLVIDTKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG NNNKAQIKDF SGNGCLYAT
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

A0A6J1J4V0 uncharacterized protein LOC111483432

5.1e-89

84.34

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Query:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS
        MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAA+K +SD      + DL +GS
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGS

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT
        GLEVLP GG+G+WRVKLVIDTKQLGEILAE+GNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KFFPIDVG NNNKAQ+KDF SGNGCLYAT
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64700.1 unknown protein

6.5e-04

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Query:  VWRVKLVIDTKQLGEILAEEGNTEALIERIRAAA
        +W+V L+I+T++L +IL+E+G T  LIE +RA A
Subjt:  VWRVKLVIDTKQLGEILAEEGNTEALIERIRAAA

AT3G61920.1 unknown protein

5.2e-17

37.18

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Query:  MGNCSLKG------MAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGV-YGVFRRPNLSSPLPISEPLDAGKSYFLLPL-SRAADKVQSDDGEQ--
        MGNC  KG      +    +  I+++T +G ++  H P     I N +P  V +      + S PL   E L  G  Y+LLPL S AA   Q D  +Q  
Subjt:  MGNCSLKG------MAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGV-YGVFRRPNLSSPLPISEPLDAGKSYFLLPL-SRAADKVQSDDGEQ--

Query:  -PPSKDLGSGSGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAA
         P     G    +  L  GG GVW+V+LVI  +QL EILAE+  TEAL+E +R  A
Subjt:  -PPSKDLGSGSGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAA

AT4G10910.1 unknown protein

2.6e-08

58.33

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Query:  GSGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAAA
        G  ++V P   NGVW+ K+VI +KQL EILA EGNT ALI+++R AAA
Subjt:  GSGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAAA

Sequences

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CDS sequence

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ATGGGGAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAAAAGCCCATCAGAATTTTAACCGATTCCGGCAACATAATCAGCTTCCATGGCCCTAAACAAGTCCATCA
AATCCTCAACAACTATCCTCCCGGCGTCTATGGCGTTTTCCGCCGCCCCAATCTCTCTTCTCCCTTACCCATCTCCGAGCCCCTCGACGCCGGAAAATCCTACTTTCTCC
TCCCTCTTTCCAGAGCCGCCGATAAAGTTCAGAGCGACGATGGAGAGCAGCCGCCGTCGAAGGATCTGGGAAGTGGGTCGGGTCTGGAAGTGCTTCCGGCGGGTGGGAAC
GGCGTTTGGAGAGTCAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAACACAGAGGCCTTGATTGAGAGGATAAGGGCGGCGGCGGCGGT
GCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGACGTGGGGGAATTGGTTCAAGTTTTTTCCAATTGATGTTGGAAACAATAATAATAAAGCACAAATCAAGG
ATTTTGATTCTGGAAATGGTTGTTTATATGCAACATAA

mRNA sequence

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Protein sequence

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MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGN
GVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAAAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

Lsi06G006180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome