; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G006340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr06:9269531..9272162
RNA-Seq ExpressionLsi06G006340
SyntenyLsi06G006340
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139075.1 chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus]6.7e-15095.6Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGA+PSFGS+RKSASFVVRA ATPPVKQGADRQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_008450298.1 PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo]1.8e-15095.6Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGAKPSFGS+RKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022153224.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Momordica charantia]9.7e-14995.6Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAAR R GA+PSFGS+RKSASFVVRA ATPPVKQGA+RQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRYAMLG VGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILG+FVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022933380.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata]2.7e-14694.16Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS GS+RK+ASFVVRA ATPPVKQGA+RQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA
        EVINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_038879830.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida]2.7e-15197.44Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGAKPSFGS+RK+ASFVVRA ATPPVKQGADRQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

TrEMBL top hitse value%identityAlignment
A0A0A0LXV0 Chlorophyll a-b binding protein, chloroplastic3.3e-15095.6Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGA+PSFGS+RKSASFVVRA ATPPVKQGADRQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A1S3BPK7 Chlorophyll a-b binding protein, chloroplastic8.6e-15195.6Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGAKPSFGS+RKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A5D3DX73 Chlorophyll a-b binding protein, chloroplastic8.6e-15195.6Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAARQRLGAKPSFGS+RKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1DIF2 Chlorophyll a-b binding protein, chloroplastic4.7e-14995.6Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTSSVGAAR R GA+PSFGS+RKSASFVVRA ATPPVKQGA+RQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRYAMLG VGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILG+FVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1F4Q9 Chlorophyll a-b binding protein, chloroplastic1.3e-14694.16Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS GS+RK+ASFVVRA ATPPVKQGA+RQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA
        EVINGR+AMLGA GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic8.3e-4239.77Show/hide
Query:  ALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVIN
        ++V ++  S +G  R R+        ++ S +   R+  T  V    DR LWF       +LDGSLPGD+GFDPLGL SDPE        RW    E+++
Subjt:  ALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVIN

Query:  GRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGG
         R+AMLGA G   PE+L  +G++   +   W+       AG   Y+ D  TLF+ E+ L+G+AE RR+ D  KPG +         K  G   D  YPGG
Subjt:  GRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGG

Query:  PLFNPLGFGKDEKS-LKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDP
          F+PLG+G    + +K+L+ KE+KNGRLAMLA++G + Q + TG GP  NL  HL+DP
Subjt:  PLFNPLGFGKDEKS-LKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDP

P27522 Chlorophyll a-b binding protein 8, chloroplastic2.0e-13385.4Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQAL+ SSS+++S  AARQ +G++ S    RK ASFVVRA +TPPVKQGA+RQLWFASKQSL+YLDG LPGD+GFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA
        EVINGR+AMLGA GAIAPEILG  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEK LGGSGDPA
Subjt:  EVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+Q LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q32904 Chlorophyll a-b binding protein 3, chloroplastic4.0e-12984.17Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGAK---PSFGSNRKSASFVVRAGATPPVKQ-GADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRW
        MATQALV SSSLT +  A RQ   A+    S G +RK    +VRA ATPPVKQ G DR LWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRW
Subjt:  MATQALV-SSSLTSSVGAARQRLGAK---PSFGSNRKSASFVVRAGATPPVKQ-GADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRW

Query:  LAYGEVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGS
        LAYGEVINGR+AMLGAVGAIAPE LG +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEK  GGS
Subjt:  LAYGEVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGS

Query:  GDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        G+PAYPGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Subjt:  GDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic1.4e-4440.91Show/hide
Query:  RLGAKPSFGSNRKSASFVVR----------AGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRYAML
        R G    F  +R+ AS V+            G  P V    +R  W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ R+AML
Subjt:  RLGAKPSFGSNRKSASFVVR----------AGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRYAML

Query:  GAVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLF
        G  G +  ++L + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL 
Subjt:  GAVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLF

Query:  NPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        NPLG  KD ++  D KLKE+KNGRLAM+A+LG+FVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  NPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

Q9SY97 Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic1.1e-13485.35Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ  G+KP   +++K +SFVV+A ATPPVKQGA+R LWFAS QSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        +INGR+AMLGA GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 59.7e-4640.91Show/hide
Query:  RLGAKPSFGSNRKSASFVVR----------AGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRYAML
        R G    F  +R+ AS V+            G  P V    +R  W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ R+AML
Subjt:  RLGAKPSFGSNRKSASFVVR----------AGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRYAML

Query:  GAVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLF
        G  G +  ++L + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL 
Subjt:  GAVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLF

Query:  NPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        NPLG  KD ++  D KLKE+KNGRLAM+A+LG+FVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  NPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G45474.2 photosystem I light harvesting complex gene 59.7e-4640.91Show/hide
Query:  RLGAKPSFGSNRKSASFVVR----------AGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRYAML
        R G    F  +R+ AS V+            G  P V    +R  W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ R+AML
Subjt:  RLGAKPSFGSNRKSASFVVR----------AGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRYAML

Query:  GAVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLF
        G  G +  ++L + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL 
Subjt:  GAVGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLF

Query:  NPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        NPLG  KD ++  D KLKE+KNGRLAM+A+LG+FVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  NPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G61520.1 photosystem I light harvesting complex gene 37.7e-13685.35Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ  G+KP   +++K +SFVV+A ATPPVKQGA+R LWFAS QSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        +INGR+AMLGA GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

AT1G61520.2 photosystem I light harvesting complex gene 34.3e-11085.45Show/hide
Query:  QLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY
        ++W  S  S      SLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE+INGR+AMLGA GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD Y
Subjt:  QLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY

Query:  TLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQN
        TLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQN
Subjt:  TLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQN

Query:  LLDHLSDPVNNNVLTSLKFH
        LLDHL+DPVNNNVLTSLKFH
Subjt:  LLDHLSDPVNNNVLTSLKFH

AT1G61520.3 photosystem I light harvesting complex gene 37.7e-13685.35Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTSSV  ARQ  G+KP   +++K +SFVV+A ATPPVKQGA+R LWFAS QSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE

Query:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY
        +INGR+AMLGA GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTCAGGCACTTGTTTCATCTTCTTTAACCTCTTCAGTGGGTGCAGCCAGACAGAGATTAGGGGCAAAACCGTCTTTTGGATCCAACAGGAAATCAGCTTCTTT
TGTTGTTAGAGCTGGAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGACAACTATGGTTCGCTTCAAAACAAAGTCTTACTTACTTGGATGGAAGTCTCCCGGGCGATT
ACGGGTTCGACCCATTGGGGCTATCGGACCCTGAAGGAACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGTGAGGTGATCAACGGGCGGTACGCGATGTTGGGA
GCAGTAGGAGCCATTGCCCCAGAGATCCTTGGATCATTAGGGTTAATCCCACCCGAAACAGCCCTCCCATGGTTCAAAACAGGGGTGATCCCACCAGCAGGAACCTACAA
TTATTGGGCAGACCCATACACACTGTTTGTATTTGAAATGGCTCTAATGGGCTTCGCTGAACATAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGGAAACAAT
ACTTTTTGGGGCTTGAGAAGTTCTTGGGTGGTTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCATTAGGGTTTGGAAAAGATGAGAAGTCATTGAAGGAT
TTGAAGCTGAAGGAAGTGAAAAATGGAAGGCTTGCAATGTTGGCAATATTAGGTTATTTTGTACAAGGTCTTGTCACTGGTGTTGGGCCTTACCAAAACCTTTTGGATCA
TTTGTCTGACCCAGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG
mRNA sequenceShow/hide mRNA sequence
AGTGGATGAGAATATCTCTTATCTGAAAGGTAAGAGATCCACGTGGACAGTTGTAGTTGGATAGTGAGATCCGAACCCAATCTAAAACCTGGGACACTACAAATCTCAAC
CAGAATTTGGATTCTAAAATCTCCCTCTCTTCAACCTATTAGCTTATCTTATTCTTTCTCATTTCCATTTTATTATTCCTATTCCTTCCTCTCACATCATCACTCCACCA
ATAACCCCGGCCATTTTTTTTTTCTCTCAAAAAACAAACCTAATATGGCTACTCAGGCACTTGTTTCATCTTCTTTAACCTCTTCAGTGGGTGCAGCCAGACAGAGATTA
GGGGCAAAACCGTCTTTTGGATCCAACAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGGAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGACAACTATGGTTCGCTTC
AAAACAAAGTCTTACTTACTTGGATGGAAGTCTCCCGGGCGATTACGGGTTCGACCCATTGGGGCTATCGGACCCTGAAGGAACAGGAGGGTTCATCGAGCCGAGATGGT
TGGCATACGGTGAGGTGATCAACGGGCGGTACGCGATGTTGGGAGCAGTAGGAGCCATTGCCCCAGAGATCCTTGGATCATTAGGGTTAATCCCACCCGAAACAGCCCTC
CCATGGTTCAAAACAGGGGTGATCCCACCAGCAGGAACCTACAATTATTGGGCAGACCCATACACACTGTTTGTATTTGAAATGGCTCTAATGGGCTTCGCTGAACATAG
AAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGGAAACAATACTTTTTGGGGCTTGAGAAGTTCTTGGGTGGTTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGT
TCAACCCATTAGGGTTTGGAAAAGATGAGAAGTCATTGAAGGATTTGAAGCTGAAGGAAGTGAAAAATGGAAGGCTTGCAATGTTGGCAATATTAGGTTATTTTGTACAA
GGTCTTGTCACTGGTGTTGGGCCTTACCAAAACCTTTTGGATCATTTGTCTGACCCAGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAGAAGGGTTATTATAT
GAATTGTAATTTGTGTATTGTATATTAATATGGGTCACAATCCTTTTGGGTTGCTTTGGAGCTTTCAAAAATTGTTTGCCCCCTCTCTTTCTCTCTATTGTAACATGAAT
TTGAGGAAAAAAAAAACTTCTCTCTAATATTTTGCATGTCCCTAGATCTTTGTAAGAATATTGACATTTATGTTAATCATTAAACGGTCACCTACATTGCTGGATTTATG
AAGGGTAACCCTTAAACGGTGACGTTTTACAAATATGTATATTGATGTTTATTAAATATTAAAAATTTGTACTAATATAATATATATATATTATTGATT
Protein sequenceShow/hide protein sequence
MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLG
AVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKD
LKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH