; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G006350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr06:9276999..9279706
RNA-Seq ExpressionLsi06G006350
SyntenyLsi06G006350
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK28128.1 uncharacterized protein E5676_scaffold289G00340 [Cucumis melo var. makuwa]8.5e-6677.44Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILSPFSLFLLIL ISTQTHLSFS RD+ +KS+DIHDLLPLYGFP+GLLP+NVKSYTLSDDGSF I+L+S CYV+F DLVYYG+ IKGKLSYG L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        +DVSGIQVKKLFAWLPIT ++V   S+SIEF VGFLSE LP  +F +IP CR+KACLEGKTE +
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

XP_004139074.1 uncharacterized protein LOC101202755 [Cucumis sativus]6.5e-6678.66Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFSTILSPFSLFLLIL  STQTHLSFS RD  ++S+DIHDLLPLYGFP+GLLP+NV SYTLSDDG+FEIQL+S CYV F+DLVYYG+NIKGKLS   L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        +DVSGI+VKKLFAWLPIT IKV   S+SIEFAVGFLSE LP  +F +IP CRRKACLEGKTEA+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

XP_008450299.1 PREDICTED: uncharacterized protein LOC103491951 [Cucumis melo]2.9e-6678.05Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILSPFSLFLLIL ISTQTHLSFS RD+ +KS+DIHDLLPLYGFP+GLLP+NVKSYTLSDDGSF I+L+S CYV+F DLVYYG+ IKGKLSYG L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        +DVSGIQVKKLFAWLPIT ++V   S+SIEF VGFLSE LP  +F +IP CR+KACLEGKTEA+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

XP_038880734.1 uncharacterized protein LOC120072336 isoform X1 [Benincasa hispida]3.2e-6580.49Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILS FSLFLLILA+STQTHLSFST      STDIHDLLPLYGFPIGLLPNNV+SYTLSDDGSF+IQL+SDCYVKFTDLVYYGRNIKGKLSYG L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        TDVSGIQVKKLFAWLPIT IKV+QGS+SIEFAVGFLSE LP  +F +IP CR++A L  + +A+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

XP_038880736.1 uncharacterized protein LOC120072336 isoform X2 [Benincasa hispida]3.2e-6580.49Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILS FSLFLLILA+STQTHLSFST      STDIHDLLPLYGFPIGLLPNNV+SYTLSDDGSF+IQL+SDCYVKFTDLVYYGRNIKGKLSYG L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        TDVSGIQVKKLFAWLPIT IKV+QGS+SIEFAVGFLSE LP  +F +IP CR++A L  + +A+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

TrEMBL top hitse value%identityAlignment
A0A0A0M0C4 Uncharacterized protein3.2e-6678.66Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFSTILSPFSLFLLIL  STQTHLSFS RD  ++S+DIHDLLPLYGFP+GLLP+NV SYTLSDDG+FEIQL+S CYV F+DLVYYG+NIKGKLS   L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        +DVSGI+VKKLFAWLPIT IKV   S+SIEFAVGFLSE LP  +F +IP CRRKACLEGKTEA+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

A0A1S3BPX6 uncharacterized protein LOC1034919511.4e-6678.05Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILSPFSLFLLIL ISTQTHLSFS RD+ +KS+DIHDLLPLYGFP+GLLP+NVKSYTLSDDGSF I+L+S CYV+F DLVYYG+ IKGKLSYG L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        +DVSGIQVKKLFAWLPIT ++V   S+SIEF VGFLSE LP  +F +IP CR+KACLEGKTEA+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

A0A5A7UJ73 Uncharacterized protein1.4e-6678.05Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILSPFSLFLLIL ISTQTHLSFS RD+ +KS+DIHDLLPLYGFP+GLLP+NVKSYTLSDDGSF I+L+S CYV+F DLVYYG+ IKGKLSYG L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        +DVSGIQVKKLFAWLPIT ++V   S+SIEF VGFLSE LP  +F +IP CR+KACLEGKTEA+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

A0A5D3DXH8 Uncharacterized protein4.1e-6677.44Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILSPFSLFLLIL ISTQTHLSFS RD+ +KS+DIHDLLPLYGFP+GLLP+NVKSYTLSDDGSF I+L+S CYV+F DLVYYG+ IKGKLSYG L
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        +DVSGIQVKKLFAWLPIT ++V   S+SIEF VGFLSE LP  +F +IP CR+KACLEGKTE +
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

A0A6J1H9I3 uncharacterized protein LOC1114613586.4e-5972.56Show/hide
Query:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL
        MASFS ILSPFSLFLLILAISTQTHLSFS+ D  +  TDIH+LL  YGFP GLLPNNVKSYTLSDDG+FEI+L++DCYV F++LVYY + I GKLSYG +
Subjt:  MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFL

Query:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI
        TDVSGIQVKKLF WL ++  K NQGS +I F VG LSET PAE+F TIP CRRK CL G+TEA+
Subjt:  TDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55265.1 Protein of unknown function, DUF5382.3e-4050.88Show/hide
Query:  STILSPFS-LFLLILAISTQTHLS------------FSTRDI---TVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTD-LVYY
        S++L+ FS LFL +L++S+  +L             FS+ ++   ++ + DIHDLLP YGFP GLLPNNVKSYT+SDDG F + L S CYVKF+D LV+Y
Subjt:  STILSPFS-LFLLILAISTQTHLS------------FSTRDI---TVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTD-LVYY

Query:  GRNIKGKLSYGFLTDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLE
        G+NI GKLSYG + DV GIQ K+ F WLPITA++ +  S ++ F+VGF+S+TLPA +F  +P+C R   L+
Subjt:  GRNIKGKLSYGFLTDVSGIQVKKLFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLE

AT1G61667.1 Protein of unknown function, DUF5383.7e-1937.8Show/hide
Query:  TDIHDLLPLYGFPIGLLPNNVKSYTLSD-DGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSGIQVKKLFAWLPITAIKVNQGSES-IEFAVGF
        + I +LL   G P GL P+NV+SY+L D  G  E+QL++ C+ +F + VY+ R IK  LSYG L  + G+  ++LF WLP+  I VN  S   + F +G 
Subjt:  TDIHDLLPLYGFPIGLLPNNVKSYTLSD-DGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSGIQVKKLFAWLPITAIKVNQGSES-IEFAVGF

Query:  LSETLPAELFHTIPACRRKACLEGKTE
          + +   LF   P C     +  K E
Subjt:  LSETLPAELFHTIPACRRKACLEGKTE

AT3G07470.1 Protein of unknown function, DUF5381.5e-1229.37Show/hide
Query:  FSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLS-DDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSGIQVK
        F   +L+  IS  T +S        ++  I+++L   G P G+ P  V+ +T   + G F + L   C  K+   ++Y  NI G +    ++D+SGI  +
Subjt:  FSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLS-DDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSGIQVK

Query:  KLFAWLPITAIKVNQGSES-IEFAVGFLSETLPAELFHTIPAC
        +LF W P+  I+V+  S   I F VG + +     LF T   C
Subjt:  KLFAWLPITAIKVNQGSES-IEFAVGFLSETLPAELFHTIPAC

AT5G19860.1 Protein of unknown function, DUF5384.9e-2744.22Show/hide
Query:  LSPF--SLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSG
        L PF  S+F+  L + T T  S +  D    ST +++LLP YG P GLLP+ V  +TLSDDG F + L + C ++F  LV+Y + I G++ YG +T++ G
Subjt:  LSPF--SLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSG

Query:  IQVKKLFAWLPITAIKVN-QGSESIEFAVGFLSETLPAELFHTIPAC
        IQVKK F WL +  IKV+   S+SI F VGF+++ L  + F TI +C
Subjt:  IQVKKLFAWLPITAIKVN-QGSESIEFAVGFLSETLPAELFHTIPAC

AT5G54530.1 Protein of unknown function, DUF5382.4e-1836.05Show/hide
Query:  LLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSGIQVKKLFAW
        +++L  + +  LS S+         +HD+L   G P GLLP  V SY L +DG  E+ L + CY KF   V++   ++G LSYG L  V G+  K+LF W
Subjt:  LLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSGIQVKKLFAW

Query:  LPITAIKV-NQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGK
        L +  I V N  S  I F +G   + L   LF   P C+    L+ K
Subjt:  LPITAIKV-NQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCTCTACAATTCTCTCCCCATTCTCACTATTCCTTCTAATTCTCGCCATTTCCACTCAAACCCATCTCTCCTTTTCAACAAGGGATATCACCGTCAAGTC
AACTGATATCCACGATCTTCTTCCCCTTTACGGTTTTCCCATCGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGTAGCTTTGAAATCCAACTCG
AAAGTGATTGCTATGTGAAATTCACTGATCTGGTCTATTACGGAAGGAATATCAAGGGCAAATTGAGCTATGGGTTTTTGACCGATGTTTCTGGGATTCAAGTGAAGAAG
CTCTTCGCCTGGCTCCCTATTACGGCAATCAAGGTTAATCAAGGCTCTGAATCCATCGAGTTTGCGGTTGGGTTCTTGTCTGAGACTTTGCCGGCTGAACTGTTCCATAC
CATTCCTGCATGTAGAAGGAAAGCTTGCCTAGAAGGAAAAACAGAGGCAATCGTCGATAAGATGAGTGCAGCTCAGGATGCACGAAACATTTGCTACGTTTTTAGAGCTG
ATATTAATCTCGGTCGGTCTCTTGCAGGTGGAAATGATAGCTTTTCCAAAGCGTTTATCCTTTTCATTTGGTGTGAGAAGCATGTTGACCTTTGCAAGAAGAATAATGTA
ATCTTTGTTTCTATGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTCTCTACAATTCTCTCCCCATTCTCACTATTCCTTCTAATTCTCGCCATTTCCACTCAAACCCATCTCTCCTTTTCAACAAGGGATATCACCGTCAAGTC
AACTGATATCCACGATCTTCTTCCCCTTTACGGTTTTCCCATCGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGTAGCTTTGAAATCCAACTCG
AAAGTGATTGCTATGTGAAATTCACTGATCTGGTCTATTACGGAAGGAATATCAAGGGCAAATTGAGCTATGGGTTTTTGACCGATGTTTCTGGGATTCAAGTGAAGAAG
CTCTTCGCCTGGCTCCCTATTACGGCAATCAAGGTTAATCAAGGCTCTGAATCCATCGAGTTTGCGGTTGGGTTCTTGTCTGAGACTTTGCCGGCTGAACTGTTCCATAC
CATTCCTGCATGTAGAAGGAAAGCTTGCCTAGAAGGAAAAACAGAGGCAATCGTCGATAAGATGAGTGCAGCTCAGGATGCACGAAACATTTGCTACGTTTTTAGAGCTG
ATATTAATCTCGGTCGGTCTCTTGCAGGTGGAAATGATAGCTTTTCCAAAGCGTTTATCCTTTTCATTTGGTGTGAGAAGCATGTTGACCTTTGCAAGAAGAATAATGTA
ATCTTTGTTTCTATGACATGA
Protein sequenceShow/hide protein sequence
MASFSTILSPFSLFLLILAISTQTHLSFSTRDITVKSTDIHDLLPLYGFPIGLLPNNVKSYTLSDDGSFEIQLESDCYVKFTDLVYYGRNIKGKLSYGFLTDVSGIQVKK
LFAWLPITAIKVNQGSESIEFAVGFLSETLPAELFHTIPACRRKACLEGKTEAIVDKMSAAQDARNICYVFRADINLGRSLAGGNDSFSKAFILFIWCEKHVDLCKKNNV
IFVSMT