; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G006360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr06:9281283..9281777
RNA-Seq ExpressionLsi06G006360
SyntenyLsi06G006360
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588240.1 hypothetical protein SDJN03_16805, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4865.45Show/hide
Query:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC
        MAS S   + LLI  I+ +TH++  + +  +N   STDIH+LLPLYGFPKGLLPNNVKSYT+ A DGSFEIELESECYVKF D +VYY+K +KGKLRYG 
Subjt:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC

Query:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        V DVSGIQ KK+F+WVSVTGIKAN+GS TIDFYVG LS+TLP   F  IP C R     ERTE +
Subjt:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

KAG7022156.1 hypothetical protein SDJN02_15885, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-4966.06Show/hide
Query:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC
        MAS S   + LLI  I+ +THL+  + +  +N   STDIH+LLPLYGFPKGLLPNNVKSYT+ A DGSFEIELESECYVKF D +VYY+K +KGKLRYG 
Subjt:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC

Query:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        V DVSGIQ KK+F+WVSVTGIKAN+GS TIDFYVG LS+TLP   F  IP+C R     ERTE +
Subjt:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

XP_022153277.1 uncharacterized protein LOC111020803 [Momordica charantia]3.1e-4965.52Show/hide
Query:  MASFSTII---FLLIFPISTKTHLSFPSTNSKIN------PLKST-DIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKK
        MASFS  I   FLLI  I T+THLS   T+ KI       PLKST D+H+LLP YGFPKGLLP+NVKSYT+ + DGSFEIELESECYVKF   +VYY+KK
Subjt:  MASFSTII---FLLIFPISTKTHLSFPSTNSKIN------PLKST-DIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKK

Query:  IKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        IKGKL YG V D SGIQ KK+F+WVSVTGIKAN    TIDF+VGFLS+TL    F  IP CKRND   ERTE +
Subjt:  IKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

XP_022933750.1 uncharacterized protein LOC111441073 [Cucurbita moschata]4.5e-4866.06Show/hide
Query:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC
        MAS S   + LLI  I  +THL+    +  +N   STDIH+LLPLYGFPKGLLPNNVKSYT+ A DGSFEIELESECYVKF D +VYY+K +KGKLRYG 
Subjt:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC

Query:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        V DVSGIQ KK+F+WVSVTGIKAN+GS TIDFYVG LS+TLP   F  IP+C R     ERTE +
Subjt:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

XP_023531629.1 uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo]1.7e-4764.85Show/hide
Query:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC
        MAS S   + LLI  I+ +THL+    +  +N   STDIH+LLPLYGFPKGLLPNNVKSYT+ A DGSFEIELESECYVKF D +VYY+K +KGKLRYG 
Subjt:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC

Query:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        V DVSGI+ KK+F+WVSVTGI+AN+GS TIDFYVG LS+TLP   F  IP+C R     ERTE +
Subjt:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

TrEMBL top hitse value%identityAlignment
A0A5D3DXH8 Uncharacterized protein1.5e-4156.89Show/hide
Query:  MASFSTI-----IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKL
        MASFS I     +FLLI  IST+THLSF + +     LKS+DIH LLPLYGFP GLLP+NVKSYT+ + DGSF IEL+S CYV+F D +VYY K IKGKL
Subjt:  MASFSTI-----IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKL

Query:  RYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTE
         YG + DVSGIQVKK+F W+ +TG++    S++I+F VGFLS+ LP  +F +IP+C++      +TE
Subjt:  RYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTE

A0A6J1DIG2 uncharacterized protein LOC1110208031.5e-4965.52Show/hide
Query:  MASFSTII---FLLIFPISTKTHLSFPSTNSKIN------PLKST-DIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKK
        MASFS  I   FLLI  I T+THLS   T+ KI       PLKST D+H+LLP YGFPKGLLP+NVKSYT+ + DGSFEIELESECYVKF   +VYY+KK
Subjt:  MASFSTII---FLLIFPISTKTHLSFPSTNSKIN------PLKST-DIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKK

Query:  IKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        IKGKL YG V D SGIQ KK+F+WVSVTGIKAN    TIDF+VGFLS+TL    F  IP CKRND   ERTE +
Subjt:  IKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

A0A6J1F5P9 uncharacterized protein LOC1114410732.2e-4866.06Show/hide
Query:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC
        MAS S   + LLI  I  +THL+    +  +N   STDIH+LLPLYGFPKGLLPNNVKSYT+ A DGSFEIELESECYVKF D +VYY+K +KGKLRYG 
Subjt:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC

Query:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        V DVSGIQ KK+F+WVSVTGIKAN+GS TIDFYVG LS+TLP   F  IP+C R     ERTE +
Subjt:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

A0A6J1H9I3 uncharacterized protein LOC1114613588.5e-4559.17Show/hide
Query:  MASFSTI-----IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKL
        MASFS I     +FLLI  IST+THLSF S +  +NP   TDIH+LL  YGFP GLLPNNVKSYT+ + DG+FEIEL+++CYV F + +VYY KKI GKL
Subjt:  MASFSTI-----IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKL

Query:  RYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
         YG V DVSGIQVKK+F+W+SV+G K+N+GS TI F+VG LS+T P ++F  IP C+R      RTE +
Subjt:  RYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

A0A6J1KX25 uncharacterized protein LOC1114989895.9e-4663.03Show/hide
Query:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC
        MAS S   + LLI  I+ +TH++    +  +N   STDIH+LLPLYGFPKGLLPNNVKSYT+ + DGSFEIELESECYVKF D +VYY K +KGKL YG 
Subjt:  MASFSTI-IFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGC

Query:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL
        V DVSGIQ KK+F+WVSVTGI+AN+GS TIDFYVG LS+TLP   F  IP+C R     E TE +
Subjt:  VKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55265.1 Protein of unknown function, DUF5381.8e-3956.06Show/hide
Query:  FPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKA
        F S N     L + DIH LLP YGFPKGLLPNNVKSYT+ + DG F ++L S CYVKF D +V+Y K I GKL YG VKDV GIQ K+ F+W+ +T +++
Subjt:  FPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKA

Query:  NEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRN
        +  S T+ F VGF+S+TLP  +F N+PSC RN
Subjt:  NEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRN

AT1G61667.1 Protein of unknown function, DUF5384.8e-1632.52Show/hide
Query:  INPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANE-GSRT
        I P   + I  LL   G P GL P+NV+SY++    G  E++L++ C+ +F++  VY+++ IK  L YG +  + G+  +++F+W+ V GI  N+  S  
Subjt:  INPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANE-GSRT

Query:  IDFYVGFLSQTLPVDLFNNIPSC
        + F +G   + +   LF + P C
Subjt:  IDFYVGFLSQTLPVDLFNNIPSC

AT3G07460.1 Protein of unknown function, DUF5381.3e-1330.25Show/hide
Query:  KSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFY-
        ++  I ++L   G P GL P  VK +TV    G F + L   C  K++   ++Y++ + G + Y  ++D+SGI  +++F+W+ V GI+ +  S  + F+ 
Subjt:  KSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKANEGSRTIDFY-

Query:  VGFLSQTLPVDLFNNIPSC
        VG L +   + LF     C
Subjt:  VGFLSQTLPVDLFNNIPSC

AT5G19860.1 Protein of unknown function, DUF5381.8e-2337.27Show/hide
Query:  MASFSTIIFLLIFPISTKTHLSFPSTNSKIN---PLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRY
        MA +   I + IF ++      F +T   +N   P   + +++LLP YG P GLLP+ V  +T+ + DG F + L + C ++F D++V+Y+K I G++ Y
Subjt:  MASFSTIIFLLIFPISTKTHLSFPSTNSKIN---PLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRY

Query:  GCVKDVSGIQVKKMFIWVSVTGIKAN-EGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLN
        G + ++ GIQVKK FIW+ V  IK +   S +I F VGF+++ L +D F  I SC  N ++
Subjt:  GCVKDVSGIQVKKMFIWVSVTGIKAN-EGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLN

AT5G54530.1 Protein of unknown function, DUF5383.1e-1533.87Show/hide
Query:  IHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKA-NEGSRTIDFYVGFL
        +H +L   G P GLLP  V SY +   DG  E+ L + CY KF+   V++   ++G L YG +  V G+  K++F+W+ V  I   N  S  I F +G  
Subjt:  IHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKKMFIWVSVTGIKA-NEGSRTIDFYVGFL

Query:  SQTLPVDLFNNIPSCKRNDLNRER
         + L + LF + P CK + + +++
Subjt:  SQTLPVDLFNNIPSCKRNDLNRER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCTCAACAATCATCTTCCTTCTGATCTTCCCCATTTCGACTAAAACCCATCTTTCCTTTCCATCAACAAATTCCAAAATCAACCCATTGAAATCAACAGA
TATCCACCAACTTTTGCCTCTCTACGGCTTCCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACCGTCTTCGCCGGCGATGGCAGCTTCGAGATCGAACTCGAAA
GCGAGTGCTATGTGAAGTTCGATGATTGGGTGGTCTATTATAACAAAAAAATCAAGGGGAAATTGAGGTATGGGTGTGTGAAGGATGTTTCTGGGATTCAAGTGAAGAAG
ATGTTCATTTGGGTGTCTGTTACTGGAATCAAAGCTAATGAAGGCTCAAGAACAATCGATTTTTATGTTGGGTTTTTGTCTCAGACCTTGCCGGTGGATCTGTTCAACAA
CATTCCTTCATGCAAGAGGAACGATTTGAACAGAGAAAGAACAGAGCCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTCTCAACAATCATCTTCCTTCTGATCTTCCCCATTTCGACTAAAACCCATCTTTCCTTTCCATCAACAAATTCCAAAATCAACCCATTGAAATCAACAGA
TATCCACCAACTTTTGCCTCTCTACGGCTTCCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACCGTCTTCGCCGGCGATGGCAGCTTCGAGATCGAACTCGAAA
GCGAGTGCTATGTGAAGTTCGATGATTGGGTGGTCTATTATAACAAAAAAATCAAGGGGAAATTGAGGTATGGGTGTGTGAAGGATGTTTCTGGGATTCAAGTGAAGAAG
ATGTTCATTTGGGTGTCTGTTACTGGAATCAAAGCTAATGAAGGCTCAAGAACAATCGATTTTTATGTTGGGTTTTTGTCTCAGACCTTGCCGGTGGATCTGTTCAACAA
CATTCCTTCATGCAAGAGGAACGATTTGAACAGAGAAAGAACAGAGCCTCTGTGA
Protein sequenceShow/hide protein sequence
MASFSTIIFLLIFPISTKTHLSFPSTNSKINPLKSTDIHQLLPLYGFPKGLLPNNVKSYTVFAGDGSFEIELESECYVKFDDWVVYYNKKIKGKLRYGCVKDVSGIQVKK
MFIWVSVTGIKANEGSRTIDFYVGFLSQTLPVDLFNNIPSCKRNDLNRERTEPL