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Lsi06G006620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationchr06:10135729..10141811
RNA-Seq ExpressionLsi06G006620
SyntenyLsi06G006620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651219.1 hypothetical protein Csa_000986 [Cucumis sativus]1.0e-1435.71Show/hide
Query:  MAHMSQKSFEK-HYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR----------------------------------------
        +A +  + F K ++++++ +ID  + +GPWS KNE +F++LM++EVAKGNRPTT FT+                                          
Subjt:  MAHMSQKSFEK-HYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR----------------------------------------

Query:  ----NGWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP
             GWDP+LGTITL E QW +L K NK+AKKF K   P
Subjt:  ----NGWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP

XP_031738598.1 L10-interacting MYB domain-containing protein [Cucumis sativus]1.3e-1436.72Show/hide
Query:  HYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLG
        ++++++ +ID  + +GPWS KNE +F++LM++EVAKGNRPTT FT+                                               GWDP+LG
Subjt:  HYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLG

Query:  TITLEEEQWNDLFKANKRAKKFFKKWLP
        TITL E QW +L K NK+AKKF K   P
Subjt:  TITLEEEQWNDLFKANKRAKKFFKKWLP

XP_038904552.1 L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]2.2e-1738.52Show/hide
Query:  SQKSFEKHYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------N
        +Q   + + ++++ +ID  K +GPWS KNE++F+DLM+EEVAKGNRPTT FT+                                               
Subjt:  SQKSFEKHYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------N

Query:  GWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP
        GWDP+LGTITLEEEQW +L K NK+ KKF K   P
Subjt:  GWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP

XP_038904553.1 L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida]2.2e-1740.48Show/hide
Query:  VDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLGTI
        ++++ +ID  K +GPWS KNE++F+DLM+EEVAKGNRPTT FT+                                               GWDP+LGTI
Subjt:  VDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLGTI

Query:  TLEEEQWNDLFKANKRAKKFFKKWLP
        TLEEEQW +L K NK+ KKF K   P
Subjt:  TLEEEQWNDLFKANKRAKKFFKKWLP

XP_038904554.1 L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida]2.2e-1740.48Show/hide
Query:  VDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLGTI
        ++++ +ID  K +GPWS KNE++F+DLM+EEVAKGNRPTT FT+                                               GWDP+LGTI
Subjt:  VDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLGTI

Query:  TLEEEQWNDLFKANKRAKKFFKKWLP
        TLEEEQW +L K NK+ KKF K   P
Subjt:  TLEEEQWNDLFKANKRAKKFFKKWLP

TrEMBL top hitse value%identityAlignment
A0A1S3B8P1 uncharacterized protein LOC103487000 isoform X11.9e-1436.3Show/hide
Query:  SQKSFEKHYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------N
        SQ   + + ++++ +ID  + +GPWS KNE +F++LM++EVAKGNRPTT FT+                                               
Subjt:  SQKSFEKHYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------N

Query:  GWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP
        GWDP+LGTITL E QW +L K NK AKKF K   P
Subjt:  GWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP

A0A1S3CFA7 L10-interacting MYB domain-containing protein-like3.1e-0948.19Show/hide
Query:  VEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI------TLEEEQWNDLFKANKRAKKFFKKWL
        V+IDGLK E  WS+K+EALFVDLMDEEVAKGNRPTT FT  +  W+ +   +          +Q  + F   ++  K FKK L
Subjt:  VEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI------TLEEEQWNDLFKANKRAKKFFKKWL

A0A1S4DUG7 L10-interacting MYB domain-containing protein-like isoform X22.5e-1437.3Show/hide
Query:  VDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLGTI
        ++++ +ID  + +GPWS KNE +F++LM++EVAKGNRPTT FT+                                               GWDP+LGTI
Subjt:  VDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRAR--------------------------------------------NGWDPLLGTI

Query:  TLEEEQWNDLFKANKRAKKFFKKWLP
        TL E QW +L K NK AKKF K   P
Subjt:  TLEEEQWNDLFKANKRAKKFFKKWLP

A0A7J0DHM2 Uncharacterized protein2.4e-0945.68Show/hide
Query:  DEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP
        DE V   G+   GPWS KNE ++VDLMDE+V   NR          GW P+ GT+   EE WN L+K N +AK F K   P
Subjt:  DEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP

A0A7J0DN27 Uncharacterized protein2.0e-0841.98Show/hide
Query:  DEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP
        DE V   G+ + GPW   NE+++VDLMDE+V   N         R GW P+ GT+   +E WN L+K N +AK F K   P
Subjt:  DEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLP

SwissProt top hitse value%identityAlignment
Q9FFJ8 L10-interacting MYB domain-containing protein1.3e-0445.65Show/hide
Query:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI
        +++G WS     LF+DL+ +E  KGNRP T F   + GW  +LGTI
Subjt:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI

Arabidopsis top hitse value%identityAlignment
AT3G11290.1 unknown protein5.1e-0428.7Show/hide
Query:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTT--------------------KFTR--ARNGWD---------------PLL------GTITLEEEQWNDLF
        +S+G WS  +  LFVDL+ +E  KGNRP +                     FTR   +N WD               P++       T    +E W +  
Subjt:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTT--------------------KFTR--ARNGWD---------------PLL------GTITLEEEQWNDLF

Query:  KANKRAKKFFKKWLP
        K N RA  F +K LP
Subjt:  KANKRAKKFFKKWLP

AT5G05800.1 unknown protein9.3e-0645.65Show/hide
Query:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI
        +++G WS     LF+DL+ +E  KGNRP T F   + GW  +LGTI
Subjt:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI

AT5G05800.2 unknown protein9.3e-0645.65Show/hide
Query:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI
        +++G WS     LF+DL+ +E  KGNRP T F   + GW  +LGTI
Subjt:  KSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCATATGTCACAAAAATCATTCGAAAAGCATTATGTTGATGAGATTGTTGAAATTGATGGATTGAAAAGTGAGGGACCATGGTCTGACAAGAATGAGGCT
TTATTTGTTGACTTAATGGATGAAGAGGTTGCAAAGGGCAATCGACCAACCACAAAATTTACAAGGGCTAGAAATGGTTGGGATCCATTATTGGGCACTATCACT
CTAGAAGAGGAGCAATGGAATGATCTTTTTAAGGCGAATAAGAGAGCTAAAAAGTTTTTTAAAAAATGGTTGCCCACATTATGCAAAGCTTATGAGGATTTTTGG
ACATACTACTGCTACAGGGGATTGTATCGGTGCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCATATGTCACAAAAATCATTCGAAAAGCATTATGTTGATGAGATTGTTGAAATTGATGGATTGAAAAGTGAGGGACCATGGTCTGACAAGAATGAGGCT
TTATTTGTTGACTTAATGGATGAAGAGGTTGCAAAGGGCAATCGACCAACCACAAAATTTACAAGGGCTAGAAATGGTTGGGATCCATTATTGGGCACTATCACT
CTAGAAGAGGAGCAATGGAATGATCTTTTTAAGGCGAATAAGAGAGCTAAAAAGTTTTTTAAAAAATGGTTGCCCACATTATGCAAAGCTTATGAGGATTTTTGG
ACATACTACTGCTACAGGGGATTGTATCGGTGCTATTAATGGCACTCATATTGCTGCATGTATTCTCCAAAACGAACAACTACCATTTCGTGGAAGAAAAATTAA
CACAACGTGAAATATAATGTGTCTTTTCATTTGAGATTCACGTATGTCATGTTTGGTTGGGAAGGATTAGCCAATGATTCTCGCATACTCCTTGAATGTATCAAG
TATCCTGAGAATAAATTTCCTATGCCTAAAAGAGACCAGTACTATCTTGTCAATTCAGGATATTCAAATATGCATGGATTTTTGGCACCATTTTGCTGTCAAAGA
TATCATTTACGAGATTTTAGAGAAAGGAGACATCGTCCTCGAGGTAGAGAAGAAGTGTTTAACTATCAACATTCTTCGCTGCAAAATGTCATTAAACGTTGTTTT
GGCATGTTGAAGGCTTGATTCCCTATTCTTAAACAAATGCCTCCTTACCCAGTCAACACACAAAAATATATACCAACAGCATGTTGC
Protein sequenceShow/hide protein sequence
MAHMSQKSFEKHYVDEIVEIDGLKSEGPWSDKNEALFVDLMDEEVAKGNRPTTKFTRARNGWDPLLGTITLEEEQWNDLFKANKRAKKFFKKWLPTLCKAYEDFW
TYYCYRGLYRCY