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Lsi06G006680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransposase
Genome locationchr06:10276654..10280009
RNA-Seq ExpressionLsi06G006680
SyntenyLsi06G006680
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040673.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]9.3e-1056.16Show/hide
Query:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVSTP
        KKART K G Y+N+ VQQ  N IDEI+  T      + SPNDAL+QALGTPE GGR K  R + KE E+ S P
Subjt:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVSTP

KAA0042505.1 transposase [Cucumis melo var. makuwa]1.4e-1054.76Show/hide
Query:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK
        KKART K G YVN+ VQQV N IDEI+      A  + SPNDAL+QALGTPE GGREK    + KEK+ ++T   P++  +KKK
Subjt:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK

KAA0049568.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]3.0e-0854.05Show/hide
Query:  RKLPTKVI-LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREK
        + +P+K   LD     KKAR +KKG+Y N+ VQ+VVNRIDEI K     A+K+PSPND L+QALGT E  GR +
Subjt:  RKLPTKVI-LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREK

KAA0053313.1 uncharacterized protein E6C27_scaffold102G001310 [Cucumis melo var. makuwa]8.4e-1153.57Show/hide
Query:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK
        KKA+T K G Y+N+ VQQV N IDEI+      A  + SPNDAL+QALGTPE GGREKV   + KEK+ ++T   P++  +KKK
Subjt:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK

XP_031741710.1 uncharacterized protein LOC116403905 [Cucumis sativus]2.3e-0860.32Show/hide
Query:  LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGR
        LD  I  KKAR NKKGEY N  VQQVV++IDEI  NT   + K  S ND L+QALGT E  GR
Subjt:  LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGR

TrEMBL top hitse value%identityAlignment
A0A5A7TC55 Putative serine/threonine-protein kinase nek24.5e-1056.16Show/hide
Query:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVSTP
        KKART K G Y+N+ VQQ  N IDEI+  T      + SPNDAL+QALGTPE GGR K  R + KE E+ S P
Subjt:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVSTP

A0A5A7TM46 Transposase6.9e-1154.76Show/hide
Query:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK
        KKART K G YVN+ VQQV N IDEI+      A  + SPNDAL+QALGTPE GGREK    + KEK+ ++T   P++  +KKK
Subjt:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK

A0A5A7U2V5 Putative serine/threonine-protein kinase nek21.4e-0854.05Show/hide
Query:  RKLPTKVI-LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREK
        + +P+K   LD     KKAR +KKG+Y N+ VQ+VVNRIDEI K     A+K+PSPND L+QALGT E  GR +
Subjt:  RKLPTKVI-LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREK

A0A5A7UBQ4 Uncharacterized protein4.1e-1153.57Show/hide
Query:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK
        KKA+T K G Y+N+ VQQV N IDEI+      A  + SPNDAL+QALGTPE GGREKV   + KEK+ ++T   P++  +KKK
Subjt:  KKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIVST---PITHKAKKK

A0A5D3CXE6 Putative serine/threonine-protein kinase nek21.4e-0854.05Show/hide
Query:  RKLPTKVI-LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREK
        + +P+K   LD     KKAR +KKG+Y N+ VQ+VVNRIDEI K     A+K+PSPND L+QALGT E  GR +
Subjt:  RKLPTKVI-LDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCGTCGCCGACGTTCTATGTCATTAATCTGTTCGTCATGTGTCAGGCGTCAGTTCCGTCTGCTCGCTTTGAGAAAACTTCCAACGAAAGTGATTTTGGACGAGCC
AATATGTGAAAAAAAAGCTCGGACAAACAAAAAGGGAGAATACGTCAATAAGAGTGTCCAACAAGTAGTCAATCGAATAGATGAGATCATAAAAAATACAGATCTAGTTG
CCAACAAAGATCCTTCACCCAATGATGCTTTGAGTCAAGCTTTGGGTACTCCAGAACAAGGTGGACGAGAGAAAGTTCCAAGGAAGATCGCAAAGGAGAAAGAAATTGTT
AGTACACCAATAACACATAAGGCAAAAAAGAAGAAAGCTATTAGTGTACCGCCAATAGCTCATGAGGCAATGGAGAAGGAAGCTATAGTGTGCCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCGTCGCCGACGTTCTATGTCATTAATCTGTTCGTCATGTGTCAGGCGTCAGTTCCGTCTGCTCGCTTTGAGAAAACTTCCAACGAAAGTGATTTTGGACGAGCC
AATATGTGAAAAAAAAGCTCGGACAAACAAAAAGGGAGAATACGTCAATAAGAGTGTCCAACAAGTAGTCAATCGAATAGATGAGATCATAAAAAATACAGATCTAGTTG
CCAACAAAGATCCTTCACCCAATGATGCTTTGAGTCAAGCTTTGGGTACTCCAGAACAAGGTGGACGAGAGAAAGTTCCAAGGAAGATCGCAAAGGAGAAAGAAATTGTT
AGTACACCAATAACACATAAGGCAAAAAAGAAGAAAGCTATTAGTGTACCGCCAATAGCTCATGAGGCAATGGAGAAGGAAGCTATAGTGTGCCGCTAA
Protein sequenceShow/hide protein sequence
MRRRRRSMSLICSSCVRRQFRLLALRKLPTKVILDEPICEKKARTNKKGEYVNKSVQQVVNRIDEIIKNTDLVANKDPSPNDALSQALGTPEQGGREKVPRKIAKEKEIV
STPITHKAKKKKAISVPPIAHEAMEKEAIVCR