; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G006820 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006820
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionVacuolar protein sorting-associated protein like
Genome locationchr06:10649897..10654316
RNA-Seq ExpressionLsi06G006820
SyntenyLsi06G006820
Gene Ontology termsNA
InterPro domainsIPR026847 - Vacuolar protein sorting-associated protein 13
IPR026854 - Vacuolar protein sorting-associated protein 13-like, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443663.1 PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X1 [Cucumis melo]1.1e-6197.64Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD EW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVEKREFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

XP_011660209.1 uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus]1.1e-6197.64Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD EW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVEKREFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

XP_031736164.1 uncharacterized protein LOC101204937 isoform X3 [Cucumis sativus]1.1e-6197.64Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD EW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVEKREFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

XP_038879509.1 uncharacterized protein LOC120071354 isoform X1 [Benincasa hispida]2.8e-6298.43Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW+ D
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVEKREFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

XP_038879511.1 uncharacterized protein LOC120071354 isoform X3 [Benincasa hispida]2.8e-6298.43Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW+ D
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVEKREFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

TrEMBL top hitse value%identityAlignment
A0A1S3B8J3 putative vacuolar protein sorting-associated protein 13A isoform X15.1e-6297.64Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD EW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVEKREFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

A0A6J1D861 uncharacterized protein LOC111018256 isoform X18.7e-6296.85Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWNEE+LLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVE+REFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

A0A6J1D8L0 uncharacterized protein LOC111018256 isoform X28.7e-6296.85Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWNEE+LLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRVC
        AVE+REFAGKKAKIAAAELAKLSRRVC
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRVC

A0A6J1H814 uncharacterized protein LOC111461381 isoform X17.4e-6197.62Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFE LVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRV
         VEKREFAGKKAKIAAAELAKLSRRV
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRV

A0A6J1JMV4 uncharacterized protein LOC111485823 isoform X17.4e-6197.62Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFE LVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW+SD
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSRRV
         VEKREFAGKKAKIAAAELAKLSRRV
Subjt:  AVEKREFAGKKAKIAAAELAKLSRRV

SwissProt top hitse value%identityAlignment
A1Z713 Vacuolar protein sorting-associated protein 134.8e-1735.54Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        +FE +V  +L   LG Y++++ + +LKI  W  +++L+N+++   A D L LP  L  G +G+L +KIPWK L   P+I+ +ED+Y+  S  ++ ++N++
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAK
           K E   KKA + A E A+
Subjt:  AVEKREFAGKKAKIAAAELAK

Q07878 Vacuolar protein sorting-associated protein 131.3e-1433.87Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        M E L   LL   LG YV++    +L +  W+ ++ L+N++L  +  D L LP  +K G +G L + +PW  L   P+ II+ED Y+  S R ++  N +
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAKLSR
         + KR F  K  K++  EL   +R
Subjt:  AVEKREFAGKKAKIAAAELAKLSR

Q54KX3 Putative vacuolar protein sorting-associated protein 13F3.9e-1940Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFE +V  LL  YL  Y+K +  + L I+ W+  + LEN+EL   A +   LPF +K+G +G+LS+KIPW  L  +P+I++++ +YI+AS +    WN +
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Q54LN2 Putative vacuolar protein sorting-associated protein 13D1.1e-1333.93Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQR--------
        +FE +V +++  +LG +++++ K++LKI   N  ++L+N+E+  EAF    LP ++ +G VG+L+IK+PW  L  + +++ L+DIYI AS          
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQR--------

Query:  ----DDEEWNSD
            DD  ++SD
Subjt:  ----DDEEWNSD

Q555C6 Putative vacuolar protein sorting-associated protein 13B2.9e-1431.4Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        MFE LV  ++  Y+G Y+K++  E+LKI  ++  ++L+N+E+  EA    +LP  +++G +G L++KIPW  L   P+I  ++ I + A  +   ++N +
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

Query:  AVEKREFAGKKAKIAAAELAK
          +K +   K+ K+   EL +
Subjt:  AVEKREFAGKKAKIAAAELAK

Arabidopsis top hitse value%identityAlignment
AT1G48090.1 calcium-dependent lipid-binding family protein6.5e-1733.86Show/hide
Query:  GLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSDAVE
        G V  LL  YLG YV  +  E L+I+ W  +++L++++L  EA + L+LP A+K G VG +++K+PWK LG +P+I++++ +++ A    D+    +   
Subjt:  GLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSDAVE

Query:  KREFAGKKAKIAAAELAKLSRRVCGEL
        ++    K  +I  AE A L  R   +L
Subjt:  KREFAGKKAKIAAAELAKLSRRVCGEL

AT4G17140.1 pleckstrin homology (PH) domain-containing protein1.4e-1639Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        M E  V  LL  YLG YV+ + KE LKI+ W  ++ L+N++L  EA + L+LP  +K G +G + +K+PW +LG +P+++ L+ I++ A    D E  S+
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

AT4G17140.2 pleckstrin homology (PH) domain-containing protein1.4e-1639Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD
        M E  V  LL  YLG YV+ + KE LKI+ W  ++ L+N++L  EA + L+LP  +K G +G + +K+PW +LG +P+++ L+ I++ A    D E  S+
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSD

AT5G24740.1 Protein of unknown function (DUF1162)4.1e-4872.87Show/hide
Query:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW
        M EG V     LL+GYLGRY+KDIQK++LKI+ WN E+LLENVEL  EAF+YLQLP ALKQGRVG+LSIKIPWKKL  DP+ I++ED++I ASQR+D+EW
Subjt:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW

Query:  NSDAVEKREFAGKKAKIAAAELAKLSRRV
        +SD VEKREFAGKKAK+A+AELAKLSRRV
Subjt:  NSDAVEKREFAGKKAKIAAAELAKLSRRV

AT5G24740.2 Protein of unknown function (DUF1162)4.1e-4872.87Show/hide
Query:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW
        M EG V     LL+GYLGRY+KDIQK++LKI+ WN E+LLENVEL  EAF+YLQLP ALKQGRVG+LSIKIPWKKL  DP+ I++ED++I ASQR+D+EW
Subjt:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEW

Query:  NSDAVEKREFAGKKAKIAAAELAKLSRRV
        +SD VEKREFAGKKAK+A+AELAKLSRRV
Subjt:  NSDAVEKREFAGKKAKIAAAELAKLSRRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAGGACTCGTTGGACAACTTCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTGAAGATTACATTTTGGAATGAGGAAATATTATT
GGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTAAAGCAAGGTCGTGTAGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTG
GATGGGATCCGATCATTATTATTTTGGAGGATATATATATTTCTGCATCTCAACGGGATGATGAAGAGTGGAACTCAGATGCAGTTGAAAAGAGAGAATTTGCTGGGAAG
AAGGCCAAAATTGCTGCCGCAGAGCTGGCAAAATTGTCAAGGCGTGTATGTGGTGAGCTACTTGACTTCCATTCATTGCATTGGCAACATCTTTGCTTATAA
mRNA sequenceShow/hide mRNA sequence
AGAATTTTCCTTAATTTTGTTCCTTGCACCCGAAATGAAAGTTACAAACCACCAGAGAAGCCAGAGAGACGGACAGAAAGAAATAGCGGCAAAATAGCACAGAGAGATTA
AGAGAATGCTGAGGCAGAGCCGGCGAGATTGAGCCAGGGGTCGAGAGAGATTTCCAGAACGGAGAGTGATTGAATGAATCGGTGAGAGCGCGATTGATTGACGGCGAGAT
TCAGGGAGAGAAAAAGAGAGAATTCTTATTCTTCAACCAAATAATCCCAGGCTAACCTGCCCAGAAACCCAACAATAATCAGATGAACTTAGACGGGTTTACTTGTTGGT
GGCAGCGTTTTTAGGGAGAATAGTGTGAGAATGTTTGAAGGACTCGTTGGACAACTTCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTGAA
GATTACATTTTGGAATGAGGAAATATTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTAAAGCAAGGTCGTGTAGGGAGGT
TAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCGATCATTATTATTTTGGAGGATATATATATTTCTGCATCTCAACGGGATGATGAAGAGTGGAACTCAGAT
GCAGTTGAAAAGAGAGAATTTGCTGGGAAGAAGGCCAAAATTGCTGCCGCAGAGCTGGCAAAATTGTCAAGGCGTGTATGTGGTGAGCTACTTGACTTCCATTCATTGCA
TTGGCAACATCTTTGCTTATAA
Protein sequenceShow/hide protein sequence
MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWNSDAVEKREFAGK
KAKIAAAELAKLSRRVCGELLDFHSLHWQHLCL