CuGenDBv2

Gene ID	Lsi06G006830
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	zinc finger CCCH domain-containing protein 16
Genome location	chr06:10703470..10762748
RNA-Seq Expression	Lsi06G006830
Synteny	Lsi06G006830
Gene Ontology terms	GO:0005622 - intracellular (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000571 - Zinc finger, CCCH-type IPR036855 - Zinc finger, CCCH-type superfamily IPR045072 - MKRN-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588269.1 Zinc finger CCCH domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia]

5.4e-169

81.33

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Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKKEPCR FQ G+C YGERCKFLHVTQQPQK S+FG GMQTSS  QQQQKPNPFGFGV STGQSKAA D GSKQ QYK ++NKWTRSSTPTGNA SRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDN   SANH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEFE LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
         N A GN+SS SG+NSLSI PS+QN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV FSS  +NSSAFG TNFPST+A AV G FGSQ+PSQT+G
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +STLSGFNNSGITNA SN LSSPA+ T FP+TDA    GGQI  N QLVNKLQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

KAG7022189.1 Zinc finger CCCH domain-containing protein 16 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-168

81.07

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKKEPCR FQ G+C YGERCKFLHVTQQPQK S+FG GMQTSS  QQQQKPNPFGFGV STGQSKAA D GSKQ QYK ++NKWTRSSTPTGNA SRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDN   SANH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEFE LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
         N A GN+SS SG+NSLSI PS+QN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV FSS  +NSSAFG TNFPST+A AV G FGSQ+PSQT+G
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +STLSGFNNSGITN+ SN LSSPA+ T FP+TDA    GGQI  N QLVNKLQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

XP_022144416.1 zinc finger CCCH domain-containing protein 16 [Momordica charantia]

7.1e-169

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Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        MQYKK+ CR FQ G+C YGERC+++H TQQPQ S SFGFGMQTSS  Q QQKPNPFGFGV STGQSKAAADFGSKQ QYKPFENKWTRSSTP+GNA S+K
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
         DN  PSANHKCTDGESCK QI EDFQNERPLWKLTCYGH+K+EPCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEF+ LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNNT-PSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
         NH PGN+SSF G+NS S LPSAQN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV  SS ++ SSAFG+ NFPSTSAVAV GA GSQLPSQTFG
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNNT-PSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESNL-SSPAMLTNFPTTDANS---------SVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +STLSGFNNSG+ N  SNL SSPA+LTNFP TDA+S         S G QIA N QLV+ LQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESNL-SSPAMLTNFPTTDANS---------SVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

XP_022925231.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata]

2.7e-168

81.33

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKKEPCR FQ G+C YGERCKFLHVTQQPQK S+FG GMQTSS  QQQQKPNPFGFGV STGQSKAA D GSKQ QYK ++NKWTRSSTPTGNA SRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDN   SANH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEFE LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
        SN A GN+SS   +NSLSI PS+QN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV FSS  +NSSAFG TNFPST+A AV G FGSQ+PSQTFG
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +STLSGFNNSGITNA SN LSSPA+ T FP+TDA    GGQI  N QLVNKLQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

XP_023005674.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita maxima]

7.1e-169

81.33

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKKEPCR FQ G+C YGERCKFLHVTQQPQK S+FG GMQTSS  QQQQKPNPFGFGV S+GQSKAA D GSKQ QYK +ENKWTRSSTPTGNA SRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDN   SANH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEFE LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
         N A GN+SS SG+NSLSI PS+QN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV FSS  +NSSAFG TNFPST+A AV G FGSQ+PSQTFG
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +ST+SGFNNSGITNA SN LSSPA+ T FP+TDA    GGQI  N QLVNKLQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B837 zinc finger CCCH domain-containing protein 16 isoform X2

8.2e-163

77.95

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKK+ CR FQ G+C YGE CKFLH T                 QQ  QQKPNPFGFGVP+ GQSKA ADFGSKQ Q+KPFENKWTR STPTGNAQSRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDNHLPS+NHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELR IAYDEAKRGI LQSIVERERNLLNSKLAEFEGLLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFGD
        SN APGN+SSFSG+NS SILPSAQNNTPSLSSFSQLGASLN GFGARPSN PN +FGQ   FSSP+QNSS FGMTNFPSTS VAV       + SQTFG+
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFGD

Query:  -STLSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
         ST SGFNN+GI NA SN+ S A LTN P  +ANSS  GQIAPN QLVNKLQQENSSVDV IWMKEKWVPGE      IPE+APPDA+VQ
Subjt:  -STLSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

A0A1S3B9C9 zinc finger CCCH domain-containing protein 16 isoform X1

1.5e-164

78.72

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKK+ CR FQ G+C YGE CKFLH T                 QQ  QQKPNPFGFGVP+ GQSKA ADFGSKQ Q+KPFENKWTR STPTGNAQSRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDNHLPS+NHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELR IAYDEAKRGI LQSIVERERNLLNSKLAEFEGLLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFGD
        SN APGN+SSFSG+NS SILPSAQNNTPSLSSFSQLGASLN GFGARPSN PN +FGQ   FSSP+QNSS FGMTNFPSTS VAV GA G    SQTFG+
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFGD

Query:  -STLSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
         ST SGFNN+GI NA SN+ S A LTN P  +ANSS  GQIAPN QLVNKLQQENSSVDV IWMKEKWVPGE      IPE+APPDA+VQ
Subjt:  -STLSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

A0A6J1CTC5 zinc finger CCCH domain-containing protein 16

3.4e-169

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        MQYKK+ CR FQ G+C YGERC+++H TQQPQ S SFGFGMQTSS  Q QQKPNPFGFGV STGQSKAAADFGSKQ QYKPFENKWTRSSTP+GNA S+K
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
         DN  PSANHKCTDGESCK QI EDFQNERPLWKLTCYGH+K+EPCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEF+ LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNNT-PSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
         NH PGN+SSF G+NS S LPSAQN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV  SS ++ SSAFG+ NFPSTSAVAV GA GSQLPSQTFG
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNNT-PSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESNL-SSPAMLTNFPTTDANS---------SVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +STLSGFNNSG+ N  SNL SSPA+LTNFP TDA+S         S G QIA N QLV+ LQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESNL-SSPAMLTNFPTTDANS---------SVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

A0A6J1EHE7 zinc finger CCCH domain-containing protein 16 isoform X1

1.3e-168

81.33

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKKEPCR FQ G+C YGERCKFLHVTQQPQK S+FG GMQTSS  QQQQKPNPFGFGV STGQSKAA D GSKQ QYK ++NKWTRSSTPTGNA SRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDN   SANH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEFE LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
        SN A GN+SS   +NSLSI PS+QN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV FSS  +NSSAFG TNFPST+A AV G FGSQ+PSQTFG
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +STLSGFNNSGITNA SN LSSPA+ T FP+TDA    GGQI  N QLVNKLQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

A0A6J1KZY0 zinc finger CCCH domain-containing protein 16 isoform X1

3.4e-169

81.33

Show/hide

Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK
        M YKKEPCR FQ G+C YGERCKFLHVTQQPQK S+FG GMQTSS  QQQQKPNPFGFGV S+GQSKAA D GSKQ QYK +ENKWTRSSTPTGNA SRK
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRK

Query:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP
        PDN   SANH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELRAIAYDEAKRGI LQSIVERERNLLNSKLAEFE LLHKPYVTP
Subjt:  PDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTP

Query:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG
         N A GN+SS SG+NSLSI PS+QN+  PSLSSFSQLGASLN GFGARPSNPPNN FGQPV FSS  +NSSAFG TNFPST+A AV G FGSQ+PSQTFG
Subjt:  SNHAPGNESSFSGSNSLSILPSAQNN-TPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFG

Query:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ
        +ST+SGFNNSGITNA SN LSSPA+ T FP+TDA    GGQI  N QLVNKLQQENSSVDVSIW+KEKWVPGE      IPEVAPPDA+VQ
Subjt:  DSTLSGFNNSGITNAESN-LSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

SwissProt top hits

e value

%identity

Alignment

G0S381 Nucleoporin AMO1

5.5e-07

29.33

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Query:  IAEDFQNERPLWKLTCYGHNKNEPCDIVG----DVSYEELRAIAYDEAKRG----------IGLQSIVERERNLLNSKLAEFEGLLHKPYVTPSNHAPGN
        I +D  +E P W L+CYG  ++ P  + G    + S+EE+R   Y+    G             Q+  ++ +N L +  A  + +L      P+      
Subjt:  IAEDFQNERPLWKLTCYGHNKNEPCDIVG----DVSYEELRAIAYDEAKRG----------IGLQSIVERERNLLNSKLAEFEGLLHKPYVTPSNHAPGN

Query:  ESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFG----------MTNFPSTSAVAVRGAFGSQLPSQT
        ESS   S   S+    +N  P    F Q  A+    FGA PS P  + FGQP P     Q SSAFG          ++ F   SA+    AFGS     T
Subjt:  ESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFG----------MTNFPSTSAVAVRGAFGSQLPSQT

Query:  FGDSTLSG
        FG  ++ G
Subjt:  FGDSTLSG

Q5Z807 Zinc finger CCCH domain-containing protein 46

1.4e-58

39.8

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Query:  MQYKKEPCRKFQAGNCHYGERCKFLHVT------QQPQKSSSFG------------FGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPF
        M  ++E CR FQ G+C YG +C++LH +      QQ  K + FG            FG Q   QQQQQQKPNPFGFGV       A A   +     KPF
Subjt:  MQYKKEPCRKFQAGNCHYGERCKFLHVT------QQPQKSSSFG------------FGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPF

Query:  ENKWTRS-STPTGNAQSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNL
        +NKW R  S PT   ++ +P     +A+  C D +SC++QI+EDF+NE P+WKLTCY H +N PC+I GD+S+EELRA AY+E K+G  LQSIVE ERNL
Subjt:  ENKWTRS-STPTGNAQSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNL

Query:  LNSKLAEFEGLLH--KPYVTPSNHAPGNESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFG---ARPSNPPNNLFGQP--VPFSSPMQNSSAFGM
         N+KL EF  LL+  +P  TPS   P   S     N+ S   S  N  P  SSFSQ+GA+ N+G G     P  P ++ FG P   P ++P   SS    
Subjt:  LNSKLAEFEGLLH--KPYVTPSNHAPGNESSFSGSNSLSILPSAQNNTPSLSSFSQLGASLNMGFG---ARPSNPPNNLFGQP--VPFSSPMQNSSAFGM

Query:  TNFPSTSAVAVRGAFGSQLPSQTFGDSTLSGFNNSGITNAESNLSSPAMLTNFPTTDANSS--VGGQIAPNGQLVNKL--QQENSSVDVSIWMKEKWVPG
                  V   FG+Q   Q FG      F +S          SPA        D  S   + G + P   +  +     +N + D SIW+KEKW  G
Subjt:  TNFPSTSAVAVRGAFGSQLPSQTFGDSTLSGFNNSGITNAESNLSSPAMLTNFPTTDANSS--VGGQIAPNGQLVNKL--QQENSSVDVSIWMKEKWVPG

Query:  EV
        E+
Subjt:  EV

Q9FWS3 Zinc finger CCCH domain-containing protein 16

2.6e-65

40.26

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Query:  KKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQK---PNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTR-SSTPTGN---A
        +KE CR FQ G+C YGE C+FLH  QQ + ++ FGFG Q   QQQQQQ+    NPFGFGV S G S+              F+N W+R +STPTG    A
Subjt:  KKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQK---PNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTR-SSTPTGN---A

Query:  QSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKP
         +++       A+HKCTD  +CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVERERNL NSK+AEFE  L  P
Subjt:  QSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKP

Query:  YVTPSNHAPGNESSFSGSNSLSILPSAQNNTPS--LSSFSQLGASLNMGFGARPSNPPNNLF--------------------GQPVPFSSPMQNS----S
        Y         N+S F+ +       S+Q N+PS   S F+Q  A  N   G   S+ P N F                    G P PF+S  Q S    +
Subjt:  YVTPSNHAPGNESSFSGSNSLSILPSAQNNTPS--LSSFSQLGASLNMGFGARPSNPPNNLF--------------------GQPVPFSSPMQNS----S

Query:  AFGMTNFPSTSAVAVRGAFGS-QLPSQTFGDST-------LSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAP--------------------
        AF  TN    S+     AF S       F  +T        SGF  +  T  +     P     F TT  N+++ GQ  P                    
Subjt:  AFGMTNFPSTSAVAVRGAFGS-QLPSQTFGDST-------LSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAP--------------------

Query:  -----------NGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALV
                   N     +LQ     VD SIW+KEKW PGE      IPE APPDA V
Subjt:  -----------NGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALV

Arabidopsis top hits

e value

%identity

Alignment

AT1G75340.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

1.9e-66

40.26

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Query:  KKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQK---PNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTR-SSTPTGN---A
        +KE CR FQ G+C YGE C+FLH  QQ + ++ FGFG Q   QQQQQQ+    NPFGFGV S G S+              F+N W+R +STPTG    A
Subjt:  KKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQK---PNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTR-SSTPTGN---A

Query:  QSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKP
         +++       A+HKCTD  +CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVERERNL NSK+AEFE  L  P
Subjt:  QSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKP

Query:  YVTPSNHAPGNESSFSGSNSLSILPSAQNNTPS--LSSFSQLGASLNMGFGARPSNPPNNLF--------------------GQPVPFSSPMQNS----S
        Y         N+S F+ +       S+Q N+PS   S F+Q  A  N   G   S+ P N F                    G P PF+S  Q S    +
Subjt:  YVTPSNHAPGNESSFSGSNSLSILPSAQNNTPS--LSSFSQLGASLNMGFGARPSNPPNNLF--------------------GQPVPFSSPMQNS----S

Query:  AFGMTNFPSTSAVAVRGAFGS-QLPSQTFGDST-------LSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAP--------------------
        AF  TN    S+     AF S       F  +T        SGF  +  T  +     P     F TT  N+++ GQ  P                    
Subjt:  AFGMTNFPSTSAVAVRGAFGS-QLPSQTFGDST-------LSGFNNSGITNAESNLSSPAMLTNFPTTDANSSVGGQIAP--------------------

Query:  -----------NGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALV
                   N     +LQ     VD SIW+KEKW PGE      IPE APPDA V
Subjt:  -----------NGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALV

AT1G75340.2 Zinc finger C-x8-C-x5-C-x3-H type family protein

3.0e-64

40.52

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Query:  KKEPCRKFQAGN--------------------CHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQK---PNPFGFGVPSTGQSKAAADFGSKQKQYK
        +KE CR FQ G+                    C YGE C+FLH  QQ + ++ FGFG Q   QQQQQQ+    NPFGFGV S G S+             
Subjt:  KKEPCRKFQAGN--------------------CHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQK---PNPFGFGVPSTGQSKAAADFGSKQKQYK

Query:  PFENKWTR-SSTPTGN---AQSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVE
         F+N W+R +STPTG    A +++       A+HKCTD  +CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVE
Subjt:  PFENKWTR-SSTPTGN---AQSRKPDNHLPSANHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVE

Query:  RERNLLNSKLAEFEGLLHKPYVTPSNHAPGNESSFSGSNSLSILPSAQNNTPS--LSSFSQLGASLNMGFGARPSNPPNNLFG----QPVPFSSPMQNSS
        RERNL NSK+AEFE  L  PY         N+S F+ +       S+Q N+PS   S F+Q  A  N   G   S+ P N F     QP  FS       
Subjt:  RERNLLNSKLAEFEGLLHKPYVTPSNHAPGNESSFSGSNSLSILPSAQNNTPS--LSSFSQLGASLNMGFGARPSNPPNNLFG----QPVPFSSPMQNSS

Query:  AFGMTNFPSTSAVAVRGA-FG-------SQLPSQTFGDSTLSGFNNSGITNAES-NLSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSI
          G + F +  +   + A FG       +   +  FG ST +   N+   N  + N + P      P  +  ++  G          +LQ     VD SI
Subjt:  AFGMTNFPSTSAVAVRGA-FG-------SQLPSQTFGDSTLSGFNNSGITNAES-NLSSPAMLTNFPTTDANSSVGGQIAPNGQLVNKLQQENSSVDVSI

Query:  WMKEKWVPGEVRSFVNIPEVAPPDALV
        W+KEKW PGE      IPE APPDA V
Subjt:  WMKEKWVPGEVRSFVNIPEVAPPDALV

Sequences

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CDS sequence

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ATGCAATACAAGAAAGAACCCTGCAGAAAATTTCAGGCTGGCAATTGTCATTATGGTGAAAGGTGCAAATTTCTCCATGTCACTCAGCAACCACAGAAATCAAGTAGCTT
TGGCTTCGGGATGCAAACTAGCTCACAACAACAACAACAACAAAAACCTAATCCCTTTGGATTTGGAGTTCCTAGCACCGGTCAATCTAAAGCAGCTGCTGATTTTGGAT
CCAAACAAAAGCAATATAAGCCATTTGAAAACAAGTGGACTCGTTCTTCCACACCTACGGGAAATGCTCAGTCTCGAAAACCGGACAATCATCTCCCGTCAGCTAATCAC
AAATGCACAGATGGGGAGTCTTGCAAGCGCCAAATCGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAATTGACCTGTTATGGCCACAATAAAAATGAGCCTTGTGA
CATTGTTGGTGATGTTAGTTACGAAGAACTACGGGCGATTGCTTATGATGAAGCCAAACGAGGAATAGGTTTGCAATCAATTGTTGAAAGAGAGAGAAATTTACTTAATT
CTAAGTTAGCCGAGTTTGAGGGCCTTCTTCATAAGCCATATGTAACACCATCAAATCATGCTCCTGGCAACGAAAGCTCATTTTCAGGGAGTAATTCTCTTTCAATTCTA
CCAAGTGCTCAGAATAACACTCCTTCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATATGGGATTTGGTGCTAGGCCCTCTAATCCGCCTAATAATCTATTCGG
CCAGCCAGTTCCTTTTTCAAGCCCCATGCAAAACTCGAGTGCATTTGGAATGACCAATTTTCCATCAACAAGTGCTGTTGCAGTTAGAGGTGCATTTGGTAGCCAACTCC
CGAGCCAAACATTTGGAGACTCTACCCTAAGTGGCTTCAATAACAGTGGCATAACAAATGCTGAAAGTAATCTTTCCTCTCCAGCGATGCTAACAAACTTCCCTACAACG
GATGCAAATTCAAGTGTCGGTGGACAAATTGCGCCAAATGGCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGATGAAAGAGAAATG
GGTTCCTGGAGAGGTACGATCTTTTGTTAATATACCGGAAGTGGCTCCTCCAGATGCACTTGTTCAGTAG

mRNA sequence

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AAAAAAATTATGACAAAATTACAAAAATGTAATTTCGTCTTTTAGCCCTCAAAATTATTGATTTTGTGTTTTGCTTTGAATCCAAGCCTTTTCTCCTCCATAACGCGCAC
AAACTCAACATATTTAGGAAAATACTCACCGCCAAGGAGAGATTGAGCGGGAAGCAAAATCTTGAATCGAGGGACAAACAGGAATCATGCAATACAAGAAAGAACCCTGC
AGAAAATTTCAGGCTGGCAATTGTCATTATGGTGAAAGGTGCAAATTTCTCCATGTCACTCAGCAACCACAGAAATCAAGTAGCTTTGGCTTCGGGATGCAAACTAGCTC
ACAACAACAACAACAACAAAAACCTAATCCCTTTGGATTTGGAGTTCCTAGCACCGGTCAATCTAAAGCAGCTGCTGATTTTGGATCCAAACAAAAGCAATATAAGCCAT
TTGAAAACAAGTGGACTCGTTCTTCCACACCTACGGGAAATGCTCAGTCTCGAAAACCGGACAATCATCTCCCGTCAGCTAATCACAAATGCACAGATGGGGAGTCTTGC
AAGCGCCAAATCGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAATTGACCTGTTATGGCCACAATAAAAATGAGCCTTGTGACATTGTTGGTGATGTTAGTTACGA
AGAACTACGGGCGATTGCTTATGATGAAGCCAAACGAGGAATAGGTTTGCAATCAATTGTTGAAAGAGAGAGAAATTTACTTAATTCTAAGTTAGCCGAGTTTGAGGGCC
TTCTTCATAAGCCATATGTAACACCATCAAATCATGCTCCTGGCAACGAAAGCTCATTTTCAGGGAGTAATTCTCTTTCAATTCTACCAAGTGCTCAGAATAACACTCCT
TCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATATGGGATTTGGTGCTAGGCCCTCTAATCCGCCTAATAATCTATTCGGCCAGCCAGTTCCTTTTTCAAGCCC
CATGCAAAACTCGAGTGCATTTGGAATGACCAATTTTCCATCAACAAGTGCTGTTGCAGTTAGAGGTGCATTTGGTAGCCAACTCCCGAGCCAAACATTTGGAGACTCTA
CCCTAAGTGGCTTCAATAACAGTGGCATAACAAATGCTGAAAGTAATCTTTCCTCTCCAGCGATGCTAACAAACTTCCCTACAACGGATGCAAATTCAAGTGTCGGTGGA
CAAATTGCGCCAAATGGCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGATGAAAGAGAAATGGGTTCCTGGAGAGGTACGATCTTT
TGTTAATATACCGGAAGTGGCTCCTCCAGATGCACTTGTTCAGTAGCCCATATTTTTTAGGACCATATACTAAAATGCGTACGTGCAATTGCATGTACTAAAATACCTAG
ATTTGATATAAACATTTATAGTATAGCAGTTTATGTATAACTTAAAACTTTGAAAGTTCAAGGGGATTTTTGAATGAATGGTATATGATTCTACCTCGACGGATAAAAAT
GAAACTATAAATGCCTAATGCCTCAAACCCAAGATTTGGAATTTGAATTCA

Protein sequence

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MQYKKEPCRKFQAGNCHYGERCKFLHVTQQPQKSSSFGFGMQTSSQQQQQQKPNPFGFGVPSTGQSKAAADFGSKQKQYKPFENKWTRSSTPTGNAQSRKPDNHLPSANH
KCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRAIAYDEAKRGIGLQSIVERERNLLNSKLAEFEGLLHKPYVTPSNHAPGNESSFSGSNSLSIL
PSAQNNTPSLSSFSQLGASLNMGFGARPSNPPNNLFGQPVPFSSPMQNSSAFGMTNFPSTSAVAVRGAFGSQLPSQTFGDSTLSGFNNSGITNAESNLSSPAMLTNFPTT
DANSSVGGQIAPNGQLVNKLQQENSSVDVSIWMKEKWVPGEVRSFVNIPEVAPPDALVQ

Lsi06G006830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome