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Lsi06G006980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWRKY transcription factor SUSIBA2-like isoform X1
Genome locationchr06:11109787..11112621
RNA-Seq ExpressionLsi06G006980
SyntenyLsi06G006980
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653575.1 hypothetical protein Csa_007221 [Cucumis sativus]3.1e-2274.36Show/hide
Query:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
        + PT  L    + L   DLPSPTTGTF PIHQIKDEQSLL+PVMPEDGISHG+EDS+FRFAP GELC LQSLLR+ENQ
Subjt:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
KAG7023764.1 putative WRKY transcription factor 2 [Cucurbita argyrosperma subsp. argyrosperma]9.0e-2284.13Show/hide
Query:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
        DLPSPTTGTFPIHQIKDE SLL+PVMPEDG SHG+EDSYFRF PHGEL  LQSL RLENQ  D
Subjt:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
XP_031743406.1 WRKY transcription factor SUSIBA2 [Cucumis sativus]3.1e-2274.36Show/hide
Query:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
        + PT  L    + L   DLPSPTTGTF PIHQIKDEQSLL+PVMPEDGISHG+EDS+FRFAP GELC LQSLLR+ENQ
Subjt:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
XP_038901908.1 WRKY transcription factor SUSIBA2-like isoform X1 [Benincasa hispida]1.4e-2284.13Show/hide
Query:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
        DLPSPTTGTFPIHQIKDE++LL+PVMPEDGISH ++DSYF FAPHGELC LQSLLRLENQ  D
Subjt:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
XP_038901912.1 probable WRKY transcription factor 33 isoform X3 [Benincasa hispida]1.4e-2284.13Show/hide
Query:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
        DLPSPTTGTFPIHQIKDE++LL+PVMPEDGISH ++DSYF FAPHGELC LQSLLRLENQ  D
Subjt:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
TrEMBL top hitse value%identityAlignment
A0A0A0M0L1 Uncharacterized protein1.5e-2274.36Show/hide
Query:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
        + PT  L    + L   DLPSPTTGTF PIHQIKDEQSLL+PVMPEDGISHG+EDS+FRFAP GELC LQSLLR+ENQ
Subjt:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
A0A1S3B9D6 WRKY transcription factor SUSIBA2-like isoform X13.7e-2173.08Show/hide
Query:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
        + PT  L    + L   DLPSPTTGTF PIHQIKDEQSLL+PVMPEDGISHG EDSY RFAP GELC LQ LLRLEN+
Subjt:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
A0A5A7T5Q6 WRKY transcription factor SUSIBA2-like isoform X13.7e-2173.08Show/hide
Query:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
        + PT  L    + L   DLPSPTTGTF PIHQIKDEQSLL+PVMPEDGISHG EDSY RFAP GELC LQ LLRLEN+
Subjt:  VGPTRKLKEEFIKL--YDLPSPTTGTF-PIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQ
A0A6J1HD23 WRKY transcription factor SUSIBA2-like isoform X14.4e-2284.13Show/hide
Query:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
        DLPSPTTGTFPIHQIKDE SLL+PVMPEDG SHG+EDSYFRF PHGEL  LQSL RLENQ  D
Subjt:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
A0A6J1JK30 WRKY transcription factor WRKY24-like isoform X14.4e-2284.13Show/hide
Query:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
        DLPSPTTGTFPIHQIKDE SLL+PVMPEDG SHG+EDSYFRF PHGEL  LQSL RLENQ  D
Subjt:  DLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGTCAAAATAAAATAAAAATATTTCTCATAGATGTGGGTCCCACGAGAAAACTTAAGGAGGAATTTATCAAACTGTATGATTTGCCTTCTCCAACCACTGGCAC
TTTTCCCATACATCAAATAAAAGACGAGCAATCATTGTTGGATCCTGTAATGCCTGAAGATGGAATTAGCCACGGCAATGAGGATTCCTACTTCAGGTTCGCACCTCATG
GGGAGCTTTGTAATCTTCAAAGTCTTTTGAGGCTTGAAAATCAGGTAATGGATGCTATTTCTTTTCATGTTTGTGTAGTAAGTAGTAACTTTGCCCACAATCTTAGTGAA
TGTGTGAGGAAGAATGGATGCTTACTCTTATGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGTCAAAATAAAATAAAAATATTTCTCATAGATGTGGGTCCCACGAGAAAACTTAAGGAGGAATTTATCAAACTGTATGATTTGCCTTCTCCAACCACTGGCAC
TTTTCCCATACATCAAATAAAAGACGAGCAATCATTGTTGGATCCTGTAATGCCTGAAGATGGAATTAGCCACGGCAATGAGGATTCCTACTTCAGGTTCGCACCTCATG
GGGAGCTTTGTAATCTTCAAAGTCTTTTGAGGCTTGAAAATCAGGTAATGGATGCTATTTCTTTTCATGTTTGTGTAGTAAGTAGTAACTTTGCCCACAATCTTAGTGAA
TGTGTGAGGAAGAATGGATGCTTACTCTTATGCTAA
Protein sequenceShow/hide protein sequence
MKGQNKIKIFLIDVGPTRKLKEEFIKLYDLPSPTTGTFPIHQIKDEQSLLDPVMPEDGISHGNEDSYFRFAPHGELCNLQSLLRLENQVMDAISFHVCVVSSNFAHNLSE
CVRKNGCLLLC