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Lsi06G006990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G006990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCaM_binding domain-containing protein
Genome locationchr06:11114116..11115123
RNA-Seq ExpressionLsi06G006990
SyntenyLsi06G006990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584422.1 hypothetical protein SDJN03_20354, partial [Cucurbita argyrosperma subsp. sororia]6.4e-5559.47Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRS---------RIGSLMGPNRVKMEELNE-WRKIIGKTTYLYIYK----EGKVIVDISTPKIRP
        MAE+N D+PLAME+VSGDEA Q+ESFDIPVI   +T            I  +      + E++ E    II     + + +      +VIV I+TPK++P
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRS---------RIGSLMGPNRVKMEELNE-WRKIIGKTTYLYIYK----EGKVIVDISTPKIRP

Query:  KILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLS
        KILSRYLLP TGSCHDFCKYG K  LEGKPA  +LR+ KS+G  GRDLRRI+V LAKQN    SPKSSP+YNAIN TD+KEDIIS PEIV PSPKR L S
Subjt:  KILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLS

Query:  IKEVQDA-VHYSWTKLNLFLSKASSFA
        IKEVQ A VHY  TKLNL  SKASSFA
Subjt:  IKEVQDA-VHYSWTKLNLFLSKASSFA

KAG7020011.1 hypothetical protein SDJN02_18979, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-5557.69Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLY-IYKEG--------------------KVIVDI
        MAE+N D+PLAME+VSGDEA Q+ESFDIPVI   +T         P+ +  E ++     + +T+    I ++G                    +VIV I
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLY-IYKEG--------------------KVIVDI

Query:  STPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPS
        +TPK++PKILSRYLLP TGSCHDFCKYG K  LEGKPA  +LR+ KS+G  GRDLRRI+V LAKQN    SPKSSP+YNAIN TD+KEDIIS PEIV PS
Subjt:  STPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPS

Query:  PKRLLLSIKEVQDA-VHYSWTKLNLFLSKASSFA
        PKR L SIKEVQ A VHY  TKLNL  SKASSFA
Subjt:  PKRLLLSIKEVQDA-VHYSWTKLNLFLSKASSFA

XP_008446785.1 PREDICTED: uncharacterized protein LOC103489380 [Cucumis melo]5.2e-5762.56Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEG---KVIVDI--STPKIRPKILSRYLLP
        MA+EN D+PLAME+VS  E SQEESFDIPV+A       + ++  P  +  E ++    I    T      E    +VIVD   +TPKIRPK+LSRYL P
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEG---KVIVDI--STPKIRPKILSRYLLP

Query:  QTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAV
         TGSCHDFCKYG++HALEGKPASPV R+ K VG + +DLRR IVSLAKQNK++ SPKSS EYN IN TDLKEDIISSPEIV P PKRLL S KEVQ  AV
Subjt:  QTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAV

Query:  HYSWTKLNLFLSKASSFAG
        HYS TKLNL  SK SSFAG
Subjt:  HYSWTKLNLFLSKASSFAG

XP_011650019.1 uncharacterized protein LOC105434693 [Cucumis sativus]8.9e-5759.23Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKME--------------ELNEWRKIIGKTTYLYIYKEG---KVIVDIST--
        MA EN D+PLAME+VS  E SQEESFDIPVIA       + ++  P  +  E              E+NE   +    T      E    +VI+DI++  
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKME--------------ELNEWRKIIGKTTYLYIYKEG---KVIVDIST--

Query:  PKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPK
        PKIRP++LSRYLLP TGSCHDFCKYG+KH LEGKPASP+ R+ K VG +G+DLRR +VSLAKQNK++ S KSS EYN  N TDLKEDIISSPEIV PSPK
Subjt:  PKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPK

Query:  RLLLSIKEVQ-DAVHYSWTKLNLFLSKASSFAG
        RLL S KEVQ  AVHYS TKLNL LSK SSFAG
Subjt:  RLLLSIKEVQ-DAVHYSWTKLNLFLSKASSFAG

XP_038894083.1 uncharacterized protein LOC120082825 [Benincasa hispida]4.3e-5970Show/hide
Query:  AMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEGK---VIVDI--STPKIRPKILSRYLLPQTGSCHDFCK
        AME+VS DEASQEESFDIPVIA  +T         P  + +EE  +   I   TT      E +   VIVDI  STPKI PKILSRYL P TGSCHDFCK
Subjt:  AMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEGK---VIVDI--STPKIRPKILSRYLLPQTGSCHDFCK

Query:  YGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTT-DLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAVHYSWTKLNL
        YGTKH LEGKPAS VLR+VKS G DGR LRRIIVS AKQNKDATSPKSSPE+N IN T  LKEDIIS PEIV PSPKRLL SIKEVQ  AVHYS TKLNL
Subjt:  YGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTT-DLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAVHYSWTKLNL

Query:  FLSKASSFAG
         LSKASSFAG
Subjt:  FLSKASSFAG

TrEMBL top hitse value%identityAlignment
A0A0A0LST4 CaM_binding domain-containing protein4.3e-5759.23Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKME--------------ELNEWRKIIGKTTYLYIYKEG---KVIVDIST--
        MA EN D+PLAME+VS  E SQEESFDIPVIA       + ++  P  +  E              E+NE   +    T      E    +VI+DI++  
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKME--------------ELNEWRKIIGKTTYLYIYKEG---KVIVDIST--

Query:  PKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPK
        PKIRP++LSRYLLP TGSCHDFCKYG+KH LEGKPASP+ R+ K VG +G+DLRR +VSLAKQNK++ S KSS EYN  N TDLKEDIISSPEIV PSPK
Subjt:  PKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPK

Query:  RLLLSIKEVQ-DAVHYSWTKLNLFLSKASSFAG
        RLL S KEVQ  AVHYS TKLNL LSK SSFAG
Subjt:  RLLLSIKEVQ-DAVHYSWTKLNLFLSKASSFAG

A0A1S3BFX3 uncharacterized protein LOC1034893802.5e-5762.56Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEG---KVIVDI--STPKIRPKILSRYLLP
        MA+EN D+PLAME+VS  E SQEESFDIPV+A       + ++  P  +  E ++    I    T      E    +VIVD   +TPKIRPK+LSRYL P
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEG---KVIVDI--STPKIRPKILSRYLLP

Query:  QTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAV
         TGSCHDFCKYG++HALEGKPASPV R+ K VG + +DLRR IVSLAKQNK++ SPKSS EYN IN TDLKEDIISSPEIV P PKRLL S KEVQ  AV
Subjt:  QTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAV

Query:  HYSWTKLNLFLSKASSFAG
        HYS TKLNL  SK SSFAG
Subjt:  HYSWTKLNLFLSKASSFAG

A0A5D3BIK3 CaM_binding domain-containing protein2.5e-5762.56Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEG---KVIVDI--STPKIRPKILSRYLLP
        MA+EN D+PLAME+VS  E SQEESFDIPV+A       + ++  P  +  E ++    I    T      E    +VIVD   +TPKIRPK+LSRYL P
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEG---KVIVDI--STPKIRPKILSRYLLP

Query:  QTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAV
         TGSCHDFCKYG++HALEGKPASPV R+ K VG + +DLRR IVSLAKQNK++ SPKSS EYN IN TDLKEDIISSPEIV P PKRLL S KEVQ  AV
Subjt:  QTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLSIKEVQ-DAV

Query:  HYSWTKLNLFLSKASSFAG
        HYS TKLNL  SK SSFAG
Subjt:  HYSWTKLNLFLSKASSFAG

A0A6J1E798 uncharacterized protein LOC1114313624.0e-5557.69Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLY-IYKEG--------------------KVIVDI
        MAE+N D+PLAME+VSGDEA Q+ESFDIPVI   +T         P+ +  E ++     + +T+    I ++G                    +VIV I
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLY-IYKEG--------------------KVIVDI

Query:  STPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPS
        +TPK++PKILSRYLLP TGSCHDFCKYG K  LEGKPA  +LR+ KS+G  GRDLRRI+V LAKQN    SPKSSP+YNAIN TD+KEDIIS PEIV PS
Subjt:  STPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPS

Query:  PKRLLLSIKEVQDA-VHYSWTKLNLFLSKASSFA
        PKR L SIKEVQ A VHY  TKLNL  SKASSFA
Subjt:  PKRLLLSIKEVQDA-VHYSWTKLNLFLSKASSFA

A0A6J1KLU3 uncharacterized protein LOC1114957401.0e-5355.98Show/hide
Query:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLY-IYKEG--------------------KVIVDI
        MA++N D+PLAME+VSGDEA+Q+ES DIPVI        +  +  P  +  E ++     + +T+    I ++G                    +VIV I
Subjt:  MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLY-IYKEG--------------------KVIVDI

Query:  STPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPS
        +TPK++PKILSRYLLP TGSCHDFCKYG K  LEGKPAS +LR+ KS+G  GRDLRRI+V LAKQN    +PKSSP+YNAIN TD+KEDIIS PEIV PS
Subjt:  STPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPS

Query:  PKRLLLSIKEVQDA-VHYSWTKLNLFLSKASSFA
        PKR L SIKEVQ A VHY  TKLNL  S ASSFA
Subjt:  PKRLLLSIKEVQDA-VHYSWTKLNLFLSKASSFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G15430.1 Plant calmodulin-binding protein-related1.3e-0537.68Show/hide
Query:  WRKI-IGKTTYLYIYKEGKVIVDISTPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREV
        WR+I  GK ++LY                + K++  YL   TGSCHD CKYG K   E KP  P  + V
Subjt:  WRKI-IGKTTYLYIYKEGKVIVDISTPKIRPKILSRYLLPQTGSCHDFCKYGTKHALEGKPASPVLREV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGGAGAATGGTGATGTACCTCTTGCTATGGAGGACGTTAGTGGGGATGAAGCTAGCCAAGAGGAGAGCTTTGATATCCCTGTCATTGCAGAGGGACAAACAAG
GAGTAGAATTGGCAGTCTTATGGGCCCAAACAGGGTGAAAATGGAGGAGTTAAATGAATGGCGTAAGATAATTGGCAAAACAACGTATCTGTATATCTATAAAGAAGGAA
AAGTTATTGTGGACATTAGTACCCCAAAGATTAGACCAAAGATTCTCTCTCGTTATCTCCTACCACAGACAGGCTCCTGCCATGATTTTTGCAAATATGGTACAAAACAT
GCTCTTGAAGGGAAGCCTGCAAGTCCAGTCTTGAGAGAAGTAAAATCAGTTGGTTGTGATGGCCGGGATTTGAGGAGGATTATAGTTTCATTGGCGAAACAAAACAAAGA
TGCAACCAGTCCAAAGTCCTCCCCAGAGTATAATGCCATAAATACTACTGACTTGAAGGAAGATATAATATCTTCCCCCGAGATTGTTATGCCCTCTCCAAAAAGGCTTT
TACTGTCCATCAAGGAAGTGCAGGATGCAGTGCATTATAGTTGGACGAAACTTAATTTGTTTCTATCAAAGGCATCTTCTTTTGCAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGGAGAATGGTGATGTACCTCTTGCTATGGAGGACGTTAGTGGGGATGAAGCTAGCCAAGAGGAGAGCTTTGATATCCCTGTCATTGCAGAGGGACAAACAAG
GAGTAGAATTGGCAGTCTTATGGGCCCAAACAGGGTGAAAATGGAGGAGTTAAATGAATGGCGTAAGATAATTGGCAAAACAACGTATCTGTATATCTATAAAGAAGGAA
AAGTTATTGTGGACATTAGTACCCCAAAGATTAGACCAAAGATTCTCTCTCGTTATCTCCTACCACAGACAGGCTCCTGCCATGATTTTTGCAAATATGGTACAAAACAT
GCTCTTGAAGGGAAGCCTGCAAGTCCAGTCTTGAGAGAAGTAAAATCAGTTGGTTGTGATGGCCGGGATTTGAGGAGGATTATAGTTTCATTGGCGAAACAAAACAAAGA
TGCAACCAGTCCAAAGTCCTCCCCAGAGTATAATGCCATAAATACTACTGACTTGAAGGAAGATATAATATCTTCCCCCGAGATTGTTATGCCCTCTCCAAAAAGGCTTT
TACTGTCCATCAAGGAAGTGCAGGATGCAGTGCATTATAGTTGGACGAAACTTAATTTGTTTCTATCAAAGGCATCTTCTTTTGCAGGATAA
Protein sequenceShow/hide protein sequence
MAEENGDVPLAMEDVSGDEASQEESFDIPVIAEGQTRSRIGSLMGPNRVKMEELNEWRKIIGKTTYLYIYKEGKVIVDISTPKIRPKILSRYLLPQTGSCHDFCKYGTKH
ALEGKPASPVLREVKSVGCDGRDLRRIIVSLAKQNKDATSPKSSPEYNAINTTDLKEDIISSPEIVMPSPKRLLLSIKEVQDAVHYSWTKLNLFLSKASSFAG