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Lsi06G007010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G007010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionZinc finger (C2H2 type) family protein
Genome locationchr06:11135490..11136925
RNA-Seq ExpressionLsi06G007010
SyntenyLsi06G007010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590095.1 Protein METHYLENE BLUE SENSITIVITY 1, partial [Cucurbita argyrosperma subsp. sororia]5.3e-4594.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAGLADRSG EKGGHAKFECPHCKITAPDVK+MQIHHESKHPKIPYEEDKVVNLHAVR+AAEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
TYK19814.1 Zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa]1.8e-4594.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIP+EEDKV NLHAVR+ AEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
XP_008443699.1 PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo]1.8e-4594.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIP+EEDKV NLHAVR+ AEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
XP_022961022.1 uncharacterized protein LOC111461652 [Cucurbita moschata]5.3e-4594.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAGLADRSG EKGGHAKFECPHCKITAPDVK+MQIHHESKHPKIPYEEDKVVNLHAVR+AAEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
XP_038901282.1 protein METHYLENE BLUE SENSITIVITY 1-like [Benincasa hispida]1.4e-4595.92Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSG EKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVR+AA+ASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
TrEMBL top hitse value%identityAlignment
A0A1S3B9F4 uncharacterized protein LOC1034872308.7e-4694.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIP+EEDKV NLHAVR+ AEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
A0A5A7T9G3 Zinc finger (C2H2 type) family protein8.7e-4694.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIP+EEDKV NLHAVR+ AEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
A0A5D3D8D3 Zinc finger (C2H2 type) family protein8.7e-4694.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIP+EEDKV NLHAVR+ AEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
A0A6J1H903 uncharacterized protein LOC1114616522.5e-4594.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAGLADRSG EKGGHAKFECPHCKITAPDVK+MQIHHESKHPKIPYEEDKVVNLHAVR+AAEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
A0A6J1JHR8 uncharacterized protein LOC1114858222.5e-4594.9Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAGLADRSG EKGGHAKFECPHCKITAPDVK+MQIHHESKHPKIPYEEDKVVNLHAVR+AAEASK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
SwissProt top hitse value%identityAlignment
Q9FFD8 Protein METHYLENE BLUE SENSITIVITY 23.5e-3676.77Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLH-AVRIAAEASKGKPG
        MTGKAKPKKHTAKE+ AK DAA TNRGGGKAGLADR+G EKGGHAK+ECPHCKIT PD+K+MQIHHESKHPK+ YEE +  NLH A+   AE+SK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLH-AVRIAAEASKGKPG
Q9M8S0 Protein METHYLENE BLUE SENSITIVITY 11.3e-3879.59Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEI AKIDAA TNRGGGKAG+ADR+G EKGGHAK+ECPHCKITAP +K+MQIHHESKHP I YEE K+VNLHAV      SK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
Arabidopsis top hitse value%identityAlignment
AT3G02790.1 zinc finger (C2H2 type) family protein9.3e-4079.59Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
        MTGKAKPKKHTAKEI AKIDAA TNRGGGKAG+ADR+G EKGGHAK+ECPHCKITAP +K+MQIHHESKHP I YEE K+VNLHAV      SK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPG
AT5G16470.1 zinc finger (C2H2 type) family protein2.5e-3776.77Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLH-AVRIAAEASKGKPG
        MTGKAKPKKHTAKE+ AK DAA TNRGGGKAGLADR+G EKGGHAK+ECPHCKIT PD+K+MQIHHESKHPK+ YEE +  NLH A+   AE+SK KPG
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLH-AVRIAAEASKGKPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCGCGGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCCGGGCTCGCCGACCGGTC
TGGCCACGAGAAAGGTGGCCACGCCAAGTTCGAGTGCCCACACTGCAAGATTACGGCGCCTGATGTCAAGTCTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCC
CTTATGAAGAGGACAAGGTTGTGAATCTCCACGCTGTTCGTATTGCTGCCGAGGCGTCGAAGGGGAAACCGGGTGCTCCCATTTTACCTTTTTATCACCTTGCTTTTGGG
CTCCAAGGAGCTACTGCACCACAATTCTCTTCTTCTATAGTGGTTAATTTGAATCCTCTTGGTATCAGGCTCGGTTTAGATTCCAGTGTAATTAGTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGGGTAAGGCGAAGCCGAAGAAGCACACGGCAAAAGAGATCGCGGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCCGGGCTCGCCGACCGGTC
TGGCCACGAGAAAGGTGGCCACGCCAAGTTCGAGTGCCCACACTGCAAGATTACGGCGCCTGATGTCAAGTCTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCC
CTTATGAAGAGGACAAGGTTGTGAATCTCCACGCTGTTCGTATTGCTGCCGAGGCGTCGAAGGGGAAACCGGGTGCTCCCATTTTACCTTTTTATCACCTTGCTTTTGGG
CTCCAAGGAGCTACTGCACCACAATTCTCTTCTTCTATAGTGGTTAATTTGAATCCTCTTGGTATCAGGCTCGGTTTAGATTCCAGTGTAATTAGTGTTTAG
Protein sequenceShow/hide protein sequence
MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPYEEDKVVNLHAVRIAAEASKGKPGAPILPFYHLAFG
LQGATAPQFSSSIVVNLNPLGIRLGLDSSVISV