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Lsi06G007760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G007760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionexportin-4 isoform X1
Genome locationchr06:15379151..15389450
RNA-Seq ExpressionLsi06G007760
SyntenyLsi06G007760
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0051168 - nuclear export (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005049 - nuclear export signal receptor activity (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR044189 - Exportin 4/7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443788.1 PREDICTED: exportin-4 isoform X1 [Cucumis melo]1.6e-4178.81Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI    
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          +++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

XP_011660266.1 exportin-4 isoform X1 [Cucumis sativus]4.5e-4177.97Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQDASGPPNLAQLQATMQAIELAC SIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI    
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          +++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

XP_022158368.1 exportin-4 isoform X1 [Momordica charantia]1.0e-4077.12Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR   
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          I++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

XP_022158373.1 exportin-4 isoform X6 [Momordica charantia]1.0e-4077.12Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR   
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          I++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

XP_038877264.1 exportin-4 [Benincasa hispida]1.0e-4077.97Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQDASGP NLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQ+PHPYQTCQFILENSQVANARFQAA AIRDAAIREWSFLTADVKR+LI    
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          +++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

TrEMBL top hitse value%identityAlignment
A0A0A0LY17 Uncharacterized protein2.2e-4177.97Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQDASGPPNLAQLQATMQAIELAC SIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI    
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          +++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

A0A1S3B9L0 exportin-4 isoform X17.5e-4278.81Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI    
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          +++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

A0A6J1DVW5 exportin-4 isoform X14.9e-4177.12Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR   
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          I++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

A0A6J1DX24 exportin-4 isoform X54.9e-4177.12Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR   
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          I++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

A0A6J1E0Q7 exportin-4 isoform X44.9e-4177.12Show/hide
Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR   
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPS

Query:  AKILKEKQSSPEFIDESI
          I++   S   ++   +
Subjt:  AKILKEKQSSPEFIDESI

SwissProt top hitse value%identityAlignment
Q499Y0 Exportin-43.5e-0437.33Show/hide
Query:  LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        +AQL++  + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q5ZMR9 Exportin-42.7e-0437.8Show/hide
Query:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        A G P  +AQL+   + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q802D3 Exportin-46.0e-0435.9Show/hide
Query:  PPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        P  ++QL++  + + +A  S+        AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  PPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q9C0E2 Exportin-45.4e-0539.02Show/hide
Query:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        A GPP  +AQL+   + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q9ESJ0 Exportin-44.1e-0539.02Show/hide
Query:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        A GPP  +AQL+   + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Arabidopsis top hitse value%identityAlignment
AT3G04490.1 unknown protein7.2e-2962.26Show/hide
Query:  GPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPSAKILKEKQ
        G  +LAQLQ+TM+AIELACS IQ++ NP AAEATILSL Q+P PY+ C++ILENSQVANARFQAAAAIR++AIREWSFL  D K  LI      +++   
Subjt:  GPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPSAKILKEKQ

Query:  SSPEFI
        SS  ++
Subjt:  SSPEFI

AT4G38092.1 unknown protein2.5e-2154.17Show/hide
Query:  TMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPSAKILKEKQSSPEFI
        T   ++++ S +Q++ NP AAEATILSL Q+P PY+ C++ILENSQVANARFQAAAAIR +AIREWSFL  D K  LI      +++   SS  ++
Subjt:  TMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPSAKILKEKQSSPEFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATGTTTTCAAGATGCCAGTGGCCCTCCAAACTTGGCTCAACTTCAGGCCACCATGCAAGCCATTGAGCTTGCCTGCAGTTCCATACAGATGCACATCAACCCATC
TGCAGCAGAGGCAACTATTCTATCACTTCGCCAGGCGCCTCATCCATATCAAACATGCCAGTTCATTCTTGAAAATTCTCAGGTAGCTAATGCACGATTTCAAGCTGCTG
CTGCAATTCGAGATGCTGCTATTAGGGAGTGGAGTTTTCTTACTGCTGATGTCAAGAGAACTTTAATTAGAAATCCTTCCGCCAAAATTTTGAAAGAAAAACAAAGCTCG
CCGGAATTCATCGATGAATCTATCCATGGCAACGCTCCTACTCAACCGTCGATTGATCAGAGAACTGGAAACTCCATCCGGTTCAATGTGAACGAGGTTCAAGATTTGTT
TGAGGTGGAGAAAGAGGACGACATTCCGTTAGAAAGAGAAGGTCATTCCATATCACCAAAAAGTGGCGCCAAAGATAATTTCCGAATGCCAACGTTTGATATCCAAGAAT
AG
mRNA sequenceShow/hide mRNA sequence
TTCAAAAGAAAAAAAAAAAAAACCATAAATCCCGTGAATCACCAAATGACCAAATTGCATTTATCTCAGTCCCCTTCATTTTCGTCAAAAACCCAATGATTTGGCGTGTT
CTCCTAAGAAAACACACCACGGCGCGCTTCCTCGCATGTTCATAAACTGCCAATCTATTTCAATCTTTGAGTCAAATTCAAAGAGATTTCCCTTTACTCTCAACTTTCTT
CCATCCCCATTTCTCTTCTAAATCCGTTCTTTCTATCTCTCAACAATCAATTTTTCCGTAACCATTGAGTATTACAAGAAAATTTTAATCCGGACCTCTGACCTGAGGTC
CTCCGGTATTGAATCTACTGTACGAAGATGCAATGTTTTCAAGATGCCAGTGGCCCTCCAAACTTGGCTCAACTTCAGGCCACCATGCAAGCCATTGAGCTTGCCTGCAG
TTCCATACAGATGCACATCAACCCATCTGCAGCAGAGGCAACTATTCTATCACTTCGCCAGGCGCCTCATCCATATCAAACATGCCAGTTCATTCTTGAAAATTCTCAGG
TAGCTAATGCACGATTTCAAGCTGCTGCTGCAATTCGAGATGCTGCTATTAGGGAGTGGAGTTTTCTTACTGCTGATGTCAAGAGAACTTTAATTAGAAATCCTTCCGCC
AAAATTTTGAAAGAAAAACAAAGCTCGCCGGAATTCATCGATGAATCTATCCATGGCAACGCTCCTACTCAACCGTCGATTGATCAGAGAACTGGAAACTCCATCCGGTT
CAATGTGAACGAGGTTCAAGATTTGTTTGAGGTGGAGAAAGAGGACGACATTCCGTTAGAAAGAGAAGGTCATTCCATATCACCAAAAAGTGGCGCCAAAGATAATTTCC
GAATGCCAACGTTTGATATCCAAGAATAG
Protein sequenceShow/hide protein sequence
MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRNPSAKILKEKQSS
PEFIDESIHGNAPTQPSIDQRTGNSIRFNVNEVQDLFEVEKEDDIPLEREGHSISPKSGAKDNFRMPTFDIQE