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Lsi06G007890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G007890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationchr06:16412398..16412870
RNA-Seq ExpressionLsi06G007890
SyntenyLsi06G007890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037002.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]7.3e-3252.2Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST L S SEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

KAA0061221.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.7e-3352.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

TYJ96795.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.7e-3352.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

TYK06268.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.7e-3352.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

TYK21097.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.7e-3352.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

TrEMBL top hitse value%identityAlignment
A0A5A7V5Z1 L10-interacting MYB domain-containing protein-like8.4e-3452.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

A0A5D3BNQ5 L10-interacting MYB domain-containing protein-like8.4e-3452.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

A0A5D3C535 L10-interacting MYB domain-containing protein-like8.4e-3452.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

A0A5D3C5P0 L10-interacting MYB domain-containing protein-like3.5e-3252.2Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST L S SEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

A0A5D3DBS2 L10-interacting MYB domain-containing protein-like8.4e-3452.83Show/hide
Query:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR
        +RIF DTTATGVNA PST+L SDSEDEN                                       ++     + KNDILEKRSF  T+SQV+E Q+S 
Subjt:  MRIFRDTTATGVNAYPSTKLPSDSEDEN---------------------------------------NMCMLRTQEKNDILEKRSFSSTASQVNEGQSSR

Query:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI
        +KD++ EELM+C  ILNTMED+DGEAY+K+LKLLHG+LAWRKLFL MPDS+K+DFINS+
Subjt:  RKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPDSKKKDFINSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATTTTTAGAGATACTACTGCTACAGGGGTAAATGCTTACCCATCAACAAAACTTCCTTCAGATTCTGAAGATGAAAATAATATGTGTATGCTGAGAACGCAAGA
GAAAAATGACATCCTTGAGAAAAGATCTTTTAGTTCTACCGCCAGTCAAGTTAATGAGGGTCAATCATCAAGGAGAAAAGATGAAGTTGATGAAGAGCTTATGAAATGTT
TCAAAATTTTAAATACAATGGAGGATATTGATGGAGAGGCTTATACTAAAGTACTGAAACTTTTGCATGGAGAACTTGCATGGAGAAAATTATTTTTACTCATGCCTGAT
TCAAAGAAGAAGGATTTCATAAACAGTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGATTTTTAGAGATACTACTGCTACAGGGGTAAATGCTTACCCATCAACAAAACTTCCTTCAGATTCTGAAGATGAAAATAATATGTGTATGCTGAGAACGCAAGA
GAAAAATGACATCCTTGAGAAAAGATCTTTTAGTTCTACCGCCAGTCAAGTTAATGAGGGTCAATCATCAAGGAGAAAAGATGAAGTTGATGAAGAGCTTATGAAATGTT
TCAAAATTTTAAATACAATGGAGGATATTGATGGAGAGGCTTATACTAAAGTACTGAAACTTTTGCATGGAGAACTTGCATGGAGAAAATTATTTTTACTCATGCCTGAT
TCAAAGAAGAAGGATTTCATAAACAGTATTTAG
Protein sequenceShow/hide protein sequence
MRIFRDTTATGVNAYPSTKLPSDSEDENNMCMLRTQEKNDILEKRSFSSTASQVNEGQSSRRKDEVDEELMKCFKILNTMEDIDGEAYTKVLKLLHGELAWRKLFLLMPD
SKKKDFINSI