; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G008010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G008010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmultisubstrate pseudouridine synthase 7
Genome locationchr06:16732584..16744512
RNA-Seq ExpressionLsi06G008010
SyntenyLsi06G008010
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR001656 - Pseudouridine synthase, TruD
IPR020103 - Pseudouridine synthase, catalytic domain superfamily
IPR042214 - Pseudouridine synthase, TruD, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653624.1 hypothetical protein Csa_007328 [Cucumis sativus]1.2e-10494.74Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE IVSES PTIVHSTS+SYASEIELFRSLAGDSDAEILE FLKQINSGV+D I PIVFSPDTDK HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

XP_038878530.1 pseudouridylate synthase 7 homolog isoform X1 [Benincasa hispida]1.8e-10595.22Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE I SESRPTIVHSTSESYASEIE FRSLAGDSDAEIL+AFLKQINSGVDD ISPIVFSPDTDK HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

XP_038878531.1 pseudouridylate synthase 7 homolog isoform X2 [Benincasa hispida]1.8e-10595.22Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE I SESRPTIVHSTSESYASEIE FRSLAGDSDAEIL+AFLKQINSGVDD ISPIVFSPDTDK HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

XP_038878533.1 pseudouridylate synthase 7 homolog isoform X3 [Benincasa hispida]1.8e-10595.22Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE I SESRPTIVHSTSESYASEIE FRSLAGDSDAEIL+AFLKQINSGVDD ISPIVFSPDTDK HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

XP_038878534.1 multisubstrate pseudouridine synthase 7 isoform X4 [Benincasa hispida]1.8e-10595.22Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE I SESRPTIVHSTSESYASEIE FRSLAGDSDAEIL+AFLKQINSGVDD ISPIVFSPDTDK HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

TrEMBL top hitse value%identityAlignment
A0A0A0M0H8 Uncharacterized protein5.7e-10594.74Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE IVSES PTIVHSTS+SYASEIELFRSLAGDSDAEILE FLKQINSGV+D I PIVFSPDTDK HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

A0A1S3CHJ1 pseudouridylate synthase 7 homolog isoform X11.1e-10393.3Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE IVSES PTIVHSTS+SY SEIELFRSLAGDSDAEILE FLKQINSG +D ISPIVFSPDT K HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

A0A1S3CI40 pseudouridylate synthase 7 homolog isoform X21.1e-10393.3Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE IVSES PTIVHSTS+SY SEIELFRSLAGDSDAEILE FLKQINSG +D ISPIVFSPDT K HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

A0A5A7V3D9 Pseudouridylate synthase 7-like protein isoform X11.1e-10393.3Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE IVSES PTIVHSTS+SY SEIELFRSLAGDSDAEILE FLKQINSG +D ISPIVFSPDT K HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

A0A5D3DYX0 Pseudouridylate synthase 7-like protein isoform X11.1e-10393.3Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF
        + YSDFIVNEVDTDGNVVHLTSLDAPPE IVSES PTIVHSTS+SY SEIELFRSLAGDSDAEILE FLKQINSG +D ISPIVFSPDT K HRTAVHNF
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNF

Query:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
        FKKFKFLVTDTIDGPDSSSKCVRVRVDSG QNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK
Subjt:  FKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTK

Query:  DKRAISTQR
        DKR+ISTQR
Subjt:  DKRAISTQR

SwissProt top hitse value%identityAlignment
O74343 Multisubstrate pseudouridine synthase 72.4e-1527.59Show/hide
Query:  YSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEI----------------------ELFRSLAGDSDAEILEAFLKQINSGVDDSI
        ++DF V EVDTDGN+VHLT ++A   ++   +         +S   +I                      +L   +      E +++  K     + D I
Subjt:  YSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEI----------------------ELFRSLAGDSDAEILEAFLKQINSGVDDSI

Query:  SPIV--FSPDTDKPHRTAVHNFFKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSD-NWPEHVGKFLRFHLYKENKDTQ
        S I+   +P  DK  RT +H F       + +   G +SS+K              G F+  +  R ++P   R    +W    G++  FHLYKEN+D+ 
Subjt:  SPIV--FSPDTDKPHRTAVHNFFKKFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSD-NWPEHVGKFLRFHLYKENKDTQ

Query:  EALGLIGKMLGIQTRSFGFAGTKDKRAISTQR
        + LG I ++L + TR+   AGTKD+R ++ QR
Subjt:  EALGLIGKMLGIQTRSFGFAGTKDKRAISTQR

Q08647 Multisubstrate pseudouridine synthase 74.9e-1329.3Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAF----LKQINSGVDDSISPIVFSPDTDKPHRTA
        + Y+DF+VNE+D +G V+HLT            S+   V++  ES A+  + F ++  +   +++E F    + +I S    +          DK  RT 
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAF----LKQINSGVDDSISPIVFSPDTDKPHRTA

Query:  VHNFFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGK-FLRFHLYKENKDTQEALGLIGKMLGIQTRSF
        +H   ++ FK    + ++   + +   ++     A++NR   + K +E+ ++  D+ G +NW     K F+ F L+KENKDT EA+ +I K+L + +R  
Subjt:  VHNFFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGK-FLRFHLYKENKDTQEALGLIGKMLGIQTRSF

Query:  GFAGTKDKRAISTQR
         +AGTKD+RA++ QR
Subjt:  GFAGTKDKRAISTQR

Q08DI8 Pseudouridylate synthase 7 homolog9.9e-1429.52Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAP-PEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN
        E YSDF+V+E+  DG + HL+ L  P  E   SE   T++ +  +    E++LF++       E++E                     DT K  RT +H 
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAP-PEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN

Query:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG
          K  F  L T T D                      ++       G K   +    +WP+  G +  F LYKENKDT +A+ L+ K L ++   F + G
Subjt:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG

Query:  TKDKRAISTQ
        TKDKRAI+ Q
Subjt:  TKDKRAISTQ

Q91VU7 Pseudouridylate synthase 7 homolog4.9e-1328.57Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAP-PEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN
        E YSDF+V+E+  DG + HL  L  P  E    E   T++ +       E++LF++       E++E                     DT K  RT +H 
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAP-PEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN

Query:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG
          K  F  L T T D                      ++       G K   +    +WP+  G +  F LYKENKDT +A+ ++ K L ++   F + G
Subjt:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG

Query:  TKDKRAISTQ
        TKDKRAI+ Q
Subjt:  TKDKRAISTQ

Q96PZ0 Pseudouridylate synthase 7 homolog3.8e-1329.05Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAP-PEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN
        E YSDF+V+E+  DG + HL  L  P  E   SE   T++ +  +    E++LF++       E++E                     DT K  RT +H 
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAP-PEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN

Query:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG
          K  F  L T T D                      ++       G K   +    +WP+  G +  F LYKENKDT +A+ ++ K L ++   F + G
Subjt:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG

Query:  TKDKRAISTQ
        TKDKRAI+ Q
Subjt:  TKDKRAISTQ

Arabidopsis top hitse value%identityAlignment
AT3G04820.1 Pseudouridine synthase family protein4.0e-7967.3Show/hide
Query:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIV-SESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN
        + Y+DFIVNEVD DGNVVHLTSLD PPE+ V  E +     +  ++Y S +E F+S++  +DAE LE  + Q+ SG D  + P+V  P +DK  RTA+HN
Subjt:  EMYSDFIVNEVDTDGNVVHLTSLDAPPEVIV-SESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHN

Query:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG
        F K+ FKFLVTDT+DGPDS+SKC+RVRV+SGA NNRG  SKKRKERGDKPFDSRGS++WPEHVGKFLRFHLYKENKDTQEALGLIGKMLG+Q +SFGF+G
Subjt:  FFKK-FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAG

Query:  TKDKRAISTQR
        TKDKR++STQR
Subjt:  TKDKRAISTQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGTATTCTGACTTCATTGTGAATGAAGTTGACACTGATGGAAATGTTGTTCATTTGACGTCATTGGATGCTCCTCCAGAGGTGATTGTTTCGGAAAGCAGACC
AACGATAGTCCACAGTACAAGCGAGAGTTATGCTTCTGAAATTGAATTGTTTAGATCTCTTGCTGGTGATTCTGATGCTGAGATTTTGGAAGCTTTTCTTAAGCAAATCA
ATTCTGGTGTGGATGACAGCATTTCCCCTATTGTATTCTCCCCAGATACAGACAAACCTCATCGAACGGCTGTCCACAATTTCTTTAAGAAATTTAAGTTCCTTGTGACC
GATACTATTGATGGACCAGATTCTTCATCAAAATGTGTCCGTGTGAGGGTGGATTCGGGGGCGCAGAATAACCGAGGTCGGTTCTCTAAGAAACGAAAAGAAAGGGGTGA
TAAACCCTTTGATAGTAGAGGTTCGGACAACTGGCCTGAACATGTTGGCAAGTTTCTCAGGTTTCATCTTTACAAGGAGAACAAGGACACGCAAGAGGCATTAGGACTTA
TAGGAAAGATGCTTGGCATCCAGACGAGGTCTTTTGGTTTTGCTGGCACTAAGGATAAGCGCGCCATCTCAACTCAAAGGGGAAATGACATTTCATTAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGTATTCTGACTTCATTGTGAATGAAGTTGACACTGATGGAAATGTTGTTCATTTGACGTCATTGGATGCTCCTCCAGAGGTGATTGTTTCGGAAAGCAGACC
AACGATAGTCCACAGTACAAGCGAGAGTTATGCTTCTGAAATTGAATTGTTTAGATCTCTTGCTGGTGATTCTGATGCTGAGATTTTGGAAGCTTTTCTTAAGCAAATCA
ATTCTGGTGTGGATGACAGCATTTCCCCTATTGTATTCTCCCCAGATACAGACAAACCTCATCGAACGGCTGTCCACAATTTCTTTAAGAAATTTAAGTTCCTTGTGACC
GATACTATTGATGGACCAGATTCTTCATCAAAATGTGTCCGTGTGAGGGTGGATTCGGGGGCGCAGAATAACCGAGGTCGGTTCTCTAAGAAACGAAAAGAAAGGGGTGA
TAAACCCTTTGATAGTAGAGGTTCGGACAACTGGCCTGAACATGTTGGCAAGTTTCTCAGGTTTCATCTTTACAAGGAGAACAAGGACACGCAAGAGGCATTAGGACTTA
TAGGAAAGATGCTTGGCATCCAGACGAGGTCTTTTGGTTTTGCTGGCACTAAGGATAAGCGCGCCATCTCAACTCAAAGGGGAAATGACATTTCATTAAAATAA
Protein sequenceShow/hide protein sequence
MEMYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESRPTIVHSTSESYASEIELFRSLAGDSDAEILEAFLKQINSGVDDSISPIVFSPDTDKPHRTAVHNFFKKFKFLVT
DTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRAISTQRGNDISLK