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Lsi06G008380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G008380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA methyltransferase
Genome locationchr06:17763894..17765134
RNA-Seq ExpressionLsi06G008380
SyntenyLsi06G008380
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0008171 - O-methyltransferase activity (molecular function)
GO:0008173 - RNA methyltransferase activity (molecular function)
InterPro domainsIPR024160 - Bin3-type S-adenosyl-L-methionine binding domain
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR039772 - RNA methyltransferase Bin3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062625.1 putative RNA methyltransferase [Cucumis melo var. makuwa]2.4e-4087.1Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAE+Q++TEA   QNPKK RKHAFPYGNYR+YYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIA KFNCRSILGVDIDS ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

XP_008462755.1 PREDICTED: probable RNA methyltransferase At5g51130 [Cucumis melo]2.4e-4087.1Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAE+Q++TEA   QNPKK RKHAFPYGNYR+YYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIA KFNCRSILGVDIDS ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

XP_022987833.1 probable RNA methyltransferase At5g51130 isoform X2 [Cucurbita maxima]4.6e-3983.87Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAEEQEKTEA L QNPK+R+KHAFPYGNYR YYGYR+GQK VEDPRLKVFKKEWFEGKDCLDIGCN+G+VTIQIA KFNCR ILGVDID  ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

XP_038878261.1 probable RNA methyltransferase At5g51130 isoform X1 [Benincasa hispida]6.4e-4188.17Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAEEQEKTEA L +NPKKRRKHAFPYGNY++YYGYRVGQ LVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIA +FNCRSILGVDIDS ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

XP_038878262.1 probable RNA methyltransferase At5g51130 isoform X2 [Benincasa hispida]6.4e-4188.17Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAEEQEKTEA L +NPKKRRKHAFPYGNY++YYGYRVGQ LVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIA +FNCRSILGVDIDS ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

TrEMBL top hitse value%identityAlignment
A0A1S3CJ98 RNA methyltransferase1.2e-4087.1Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAE+Q++TEA   QNPKK RKHAFPYGNYR+YYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIA KFNCRSILGVDIDS ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

A0A5A7V9R8 RNA methyltransferase1.2e-4087.1Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAE+Q++TEA   QNPKK RKHAFPYGNYR+YYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIA KFNCRSILGVDIDS ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

A0A5D3BG34 RNA methyltransferase1.2e-4087.1Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAE+Q++TEA   QNPKK RKHAFPYGNYR+YYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIA KFNCRSILGVDIDS ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

A0A6J1JBF8 RNA methyltransferase2.2e-3983.87Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAEEQEKTEA L QNPK+R+KHAFPYGNYR YYGYR+GQK VEDPRLKVFKKEWFEGKDCLDIGCN+G+VTIQIA KFNCR ILGVDID  ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

A0A6J1JHX9 RNA methyltransferase2.2e-3983.87Show/hide
Query:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        MAEEQEKTEA L QNPK+R+KHAFPYGNYR YYGYR+GQK VEDPRLKVFKKEWFEGKDCLDIGCN+G+VTIQIA KFNCR ILGVDID  ++
Subjt:  MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

SwissProt top hitse value%identityAlignment
A3KQ55 7SK snRNA methylphosphate capping enzyme1.3e-1548.19Show/hide
Query:  QNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIYVS
        QNP++ +K  F YGNY  YYGYR    + EDPR++V   +WF GKD LD+GCN G +T+ IA  +   SI+G+DID   I+ +
Subjt:  QNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIYVS

Q6NPC9 Probable RNA methyltransferase At5g511305.9e-2961.54Show/hide
Query:  EEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        ++Q+  +    Q+ KK+ +  +P+GNYR+YYGYR+     EDPRLKV KKEWFEGKDCLDIGCN+GI+TI IA KF CRSILGVDID+ +I
Subjt:  EEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI

Q7L2J0 7SK snRNA methylphosphate capping enzyme4.1e-1449.35Show/hide
Query:  KRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIY
        K+++  F YGNY  YYGYR      ED RL+V K EWF G+D LD+GCN G +T+ IA K+    ++G+DIDS  I+
Subjt:  KRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIY

Q8K3A9 7SK snRNA methylphosphate capping enzyme2.0e-1348.05Show/hide
Query:  KRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIY
        K+++  F YGNY  YYGYR      ED RL+V K EWF+G+D LD+GCN G +T+ IA K+    ++G+DID   I+
Subjt:  KRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIY

Q9U2R0 Probable RNA methyltransferase Y17G7B.183.5e-1343.01Show/hide
Query:  KTEAGLMQNPKKRRKH---AFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIYVS
        K E    +N K++ ++    + YGN+  YYG R+      D RL VF+K+WFE K  LDIGCN G +T+ IA  F+ R I+G+DID   I V+
Subjt:  KTEAGLMQNPKKRRKH---AFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIYVS

Arabidopsis top hitse value%identityAlignment
AT5G51130.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein4.2e-3061.54Show/hide
Query:  EEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI
        ++Q+  +    Q+ KK+ +  +P+GNYR+YYGYR+     EDPRLKV KKEWFEGKDCLDIGCN+GI+TI IA KF CRSILGVDID+ +I
Subjt:  EEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGCAGGAGAAAACCGAAGCAGGACTCATGCAAAATCCTAAAAAACGCAGGAAGCATGCTTTTCCCTATGGAAATTATCGAGATTACTATGGCTACCGGGT
AGGTCAAAAATTAGTTGAAGATCCTCGTTTAAAGGTCTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGATGCAATAATGGGATAGTTACCATACAGA
TAGCTACAAAGTTTAATTGCCGGAGTATTCTTGGTGTTGATATTGATTCTGGTAAGATTTACGTTTCGAGCTCTGCAGCTTCAATTGCAGATTCTCTTTATACTTCTACA
AAGTATATGGAGGCGGTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGAAAAAAAAAAGAAAAAGGAAAGACGAAAAATGAGCTATATACGCGCCGCCACGGTTTTGCCGCGAAAATTAGGAAGAACATCACAGCCGTTAGTGGAAGCTGGC
TAACCCTAGAGATATTACTTCCTCGCTGCCACCGCCTCTTCCGCCGGGAAATTACTTTGGTTCATTCACGTTTCATCTTCACTTCCCACAGTATCAGCAACGGAGATAAC
TGAAGTTTCGATTCAAGGAAATGGCGGAAGAGCAGGAGAAAACCGAAGCAGGACTCATGCAAAATCCTAAAAAACGCAGGAAGCATGCTTTTCCCTATGGAAATTATCGA
GATTACTATGGCTACCGGGTAGGTCAAAAATTAGTTGAAGATCCTCGTTTAAAGGTCTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGATGCAATAA
TGGGATAGTTACCATACAGATAGCTACAAAGTTTAATTGCCGGAGTATTCTTGGTGTTGATATTGATTCTGGTAAGATTTACGTTTCGAGCTCTGCAGCTTCAATTGCAG
ATTCTCTTTATACTTCTACAAAGTATATGGAGGCGGTTTTGTGA
Protein sequenceShow/hide protein sequence
MAEEQEKTEAGLMQNPKKRRKHAFPYGNYRDYYGYRVGQKLVEDPRLKVFKKEWFEGKDCLDIGCNNGIVTIQIATKFNCRSILGVDIDSGKIYVSSSAASIADSLYTST
KYMEAVL