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Lsi06G008400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G008400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionphosphoribulokinase
Genome locationchr06:17768912..17781578
RNA-Seq ExpressionLsi06G008400
SyntenyLsi06G008400
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008974 - phosphoribulokinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053006.1 phosphoribulokinase [Cucumis melo var. makuwa]1.4e-3394.59Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_004146110.1 phosphoribulokinase, chloroplastic [Cucumis sativus]5.7e-3290.54Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA+MEVLPTRLIPND+EGKILRVRLIMKEGI+NF+PVYLFDEGSTISWIPCGRKL+CSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_008448619.1 PREDICTED: phosphoribulokinase, chloroplastic-like [Cucumis melo]1.4e-3394.59Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_022145315.1 phosphoribulokinase, chloroplastic [Momordica charantia]7.4e-3289.19Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA++EVLPTRLIPNDNEGKILRVRLIMKEG+K+FNPVYLFDEGSTISWIPCGRKLTCSYPGI+L C
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_038892200.1 phosphoribulokinase, chloroplastic-like [Benincasa hispida]1.4e-3394.59Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

TrEMBL top hitse value%identityAlignment
A0A0A0L1R3 Phosphoribulokinase2.8e-3290.54Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA+MEVLPTRLIPND+EGKILRVRLIMKEGI+NF+PVYLFDEGSTISWIPCGRKL+CSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A1S3BK48 Phosphoribulokinase6.6e-3494.59Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A5A7UFL3 Phosphoribulokinase6.6e-3494.59Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A6J1CU49 Phosphoribulokinase3.6e-3289.19Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQYADA++EVLPTRLIPNDNEGKILRVRLIMKEG+K+FNPVYLFDEGSTISWIPCGRKLTCSYPGI+L C
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A6J1HNB8 Phosphoribulokinase4.0e-3187.84Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        ++PQKQ+ADA++EVLPTRLIPND EGKILRVRLIM+EGI++FNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

SwissProt top hitse value%identityAlignment
P09559 Phosphoribulokinase, chloroplastic7.2e-3078.08Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        ++PQKQ+AD ++EVLPT LIP+D+EGK+LRVR+I KEG+K FNPVYLFDEGSTISWIPCGRKLTCSYPGI+ S
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS

P19824 Phosphoribulokinase, chloroplastic1.6e-2470.83Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRL
        ++PQK+ AD +++VLPT+L+P D++G+ LRVRLIMKEG K F+PVYLFDEGSTISWIPCGRKLTCS+PGI++
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRL

P25697 Phosphoribulokinase, chloroplastic2.2e-3182.19Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        ++PQKQYADA++EVLPT LIP+DNEGK+LRVRLIMKEG+K F+PVYLFDEGSTISWIPCGRKLTCSYPGI+ +
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS

P26302 Phosphoribulokinase, chloroplastic7.7e-3283.56Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        ++PQKQYADA++EVLPT+LIP+DNEGK+LRV+LIMKEGIK FNPVYLFDEGSTI+WIPCGRKLTCSYPGI+ S
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS

P27774 Phosphoribulokinase, chloroplastic1.6e-2978.87Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIR
        ++PQKQYADA++EVLPT+LIP DNEGK+LRVRLI KEG++ F+PVYLFDEGS+I+WIPCGRKLTCSYPGI+
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIR

Arabidopsis top hitse value%identityAlignment
AT1G32060.1 phosphoribulokinase1.6e-3282.19Show/hide
Query:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        ++PQKQYADA++EVLPT LIP+DNEGK+LRVRLIMKEG+K F+PVYLFDEGSTISWIPCGRKLTCSYPGI+ +
Subjt:  MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCACAGAAGCAATACGCAGATGCGATGATGGAAGTGTTGCCGACGCGATTGATTCCAAATGACAATGAAGGGAAAATTCTTAGGGTTAGATTGATAATGAAAGA
AGGAATCAAGAATTTCAATCCAGTTTACCTATTCGATGAAGGATCTACAATCTCATGGATTCCTTGTGGAAGAAAGCTTACATGTTCTTATCCTGGAATCAGGCTGTCCT
GTGATGGCTACTGCACGGCTCCAACCGAACTCGACGACTACTGCACGGCTCCAACCCACTCAACGGCTGCTGCACCGCTCCAATCCACTCGACTCGACTGCTGCACGACG
ACGGCGGCAAAAACCCTGTTTGAGAGGAAAAGATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCACAGAAGCAATACGCAGATGCGATGATGGAAGTGTTGCCGACGCGATTGATTCCAAATGACAATGAAGGGAAAATTCTTAGGGTTAGATTGATAATGAAAGA
AGGAATCAAGAATTTCAATCCAGTTTACCTATTCGATGAAGGATCTACAATCTCATGGATTCCTTGTGGAAGAAAGCTTACATGTTCTTATCCTGGAATCAGGCTGTCCT
GTGATGGCTACTGCACGGCTCCAACCGAACTCGACGACTACTGCACGGCTCCAACCCACTCAACGGCTGCTGCACCGCTCCAATCCACTCGACTCGACTGCTGCACGACG
ACGGCGGCAAAAACCCTGTTTGAGAGGAAAAGATGTTGA
Protein sequenceShow/hide protein sequence
MNPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSCDGYCTAPTELDDYCTAPTHSTAAAPLQSTRLDCCTT
TAAKTLFERKRC