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Lsi06G008440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G008440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SPEAR1-like
Genome locationchr06:17792351..17795072
RNA-Seq ExpressionLsi06G008440
SyntenyLsi06G008440
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR040356 - SPEAR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587980.1 Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4462.87Show/hide
Query:  MGSGYFGEPSLGNERGSG--SSSSSSP-SLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNS
        MGSGYFGEP  GNERGSG  SSSSSSP S SSRRG+KG  SDKQPRQPQRGLGVAQLEKIRLHGEIA+  FHPTSYTF NDQEV+RVQTGY+SVPSST S
Subjt:  MGSGYFGEPSLGNERGSG--SSSSSSP-SLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNS

Query:  SSPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLS
        SSPSYGF PSN+M                                                    WT++RR KRQERSG M QNSEACESQELDLELRLS
Subjt:  SSPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLS

Query:  II
        II
Subjt:  II

XP_008462751.1 PREDICTED: protein SPEAR1-like [Cucumis melo]1.9e-5067.16Show/hide
Query:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS
        MGSGYFGEPSLG  NERGSGSSSSSSPS SSRRGKKG  SDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSY F NDQE+ARVQTGYASVPSST SS
Subjt:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS

Query:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI
        SPSYGF PSN+M                                                    WT+SRR KRQERSGNMGQNSE CESQELDLELRLSI
Subjt:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI

Query:  I
        I
Subjt:  I

XP_011655267.1 protein SPEAR1 [Cucumis sativus]2.8e-4966.17Show/hide
Query:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS
        MGSGYFGEPSLG  N+RGSGSSSSSSP  SSRRGKKG  SDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTF NDQE+ARVQTGY SVPSST SS
Subjt:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS

Query:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI
        SPSYGF PSNIM                                                    WT+SRR KRQERSGNMGQN E CESQELDLELRLSI
Subjt:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI

Query:  I
        I
Subjt:  I

XP_023007409.1 protein SPEAR1-like [Cucurbita maxima]1.2e-4461.81Show/hide
Query:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSSP
        MGSGYFGEP  GNERGSG  SSSS S  SRRG+KG  SDKQPRQPQRGLGVAQLEKIRLHGEIA+  FHPTSYTF NDQEV+RVQTGY+SVPSST SSSP
Subjt:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSSP

Query:  SYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSII
        SYGF PSN+M                                                    WT++RR KRQERSG M QNSEACESQELDLELRLSII
Subjt:  SYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSII

XP_038878298.1 protein SPEAR3-like [Benincasa hispida]3.6e-4966Show/hide
Query:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSSP
        MGSGYFGEPSLGN    G+SSSSSP LSSRRGKKG  SDKQPRQPQRGLGVAQLEKIRLHGEIASAGFH TSYTF NDQEVARVQTGYASVPSST SSSP
Subjt:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSSP

Query:  SYGFRPSNIM-----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSII
        SYGF PSNIM                                                     WT+SRR KRQERSGNMGQNSEACESQ+LDLELRLSII
Subjt:  SYGFRPSNIM-----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSII

TrEMBL top hitse value%identityAlignment
A0A0A0LW93 SPOROCYTELESS-like EAR-containing protein 31.3e-4966.17Show/hide
Query:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS
        MGSGYFGEPSLG  N+RGSGSSSSSSP  SSRRGKKG  SDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTF NDQE+ARVQTGY SVPSST SS
Subjt:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS

Query:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI
        SPSYGF PSNIM                                                    WT+SRR KRQERSGNMGQN E CESQELDLELRLSI
Subjt:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI

Query:  I
        I
Subjt:  I

A0A1S3CHQ6 protein SPEAR1-like9.3e-5167.16Show/hide
Query:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS
        MGSGYFGEPSLG  NERGSGSSSSSSPS SSRRGKKG  SDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSY F NDQE+ARVQTGYASVPSST SS
Subjt:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS

Query:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI
        SPSYGF PSN+M                                                    WT+SRR KRQERSGNMGQNSE CESQELDLELRLSI
Subjt:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI

Query:  I
        I
Subjt:  I

A0A5A7VAB9 Protein SPEAR1-like9.3e-5167.16Show/hide
Query:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS
        MGSGYFGEPSLG  NERGSGSSSSSSPS SSRRGKKG  SDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSY F NDQE+ARVQTGYASVPSST SS
Subjt:  MGSGYFGEPSLG--NERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSS

Query:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI
        SPSYGF PSN+M                                                    WT+SRR KRQERSGNMGQNSE CESQELDLELRLSI
Subjt:  SPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSI

Query:  I
        I
Subjt:  I

A0A6J1EZZ7 protein SPEAR1-like5.8e-4562.87Show/hide
Query:  MGSGYFGEPSLGNERGSG--SSSSSSP-SLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNS
        MGSGYFGEP  GNERGSG  SSSSSSP S SSRRG+KG  SDKQPRQPQRGLGVAQLEKIRLHGEIA+  FHPTSYTF NDQEV+RVQTGY+SVPSST S
Subjt:  MGSGYFGEPSLGNERGSG--SSSSSSP-SLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNS

Query:  SSPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLS
        SSPSYGF PSN+M                                                    WT++RR KRQERSG M QNSEACESQELDLELRLS
Subjt:  SSPSYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLS

Query:  II
        II
Subjt:  II

A0A6J1L4V3 protein SPEAR1-like5.8e-4561.81Show/hide
Query:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSSP
        MGSGYFGEP  GNERGSG  SSSS S  SRRG+KG  SDKQPRQPQRGLGVAQLEKIRLHGEIA+  FHPTSYTF NDQEV+RVQTGY+SVPSST SSSP
Subjt:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSSP

Query:  SYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSII
        SYGF PSN+M                                                    WT++RR KRQERSG M QNSEACESQELDLELRLSII
Subjt:  SYGFRPSNIM----------------------------------------------------WTESRRRKRQERSGNMGQNSEACESQELDLELRLSII

SwissProt top hitse value%identityAlignment
Q6IDB0 Protein SPEAR32.7e-1550Show/hide
Query:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF------HPTSYTFANDQEVARVQTGYASVPSS
        MGS +FG P +G    S SS +SS S  ++RGK  + SDK P+QPQRGLGVAQLEKIRLHGE     F      HP++Y     QE  R+Q GY S+PSS
Subjt:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF------HPTSYTFANDQEVARVQTGYASVPSS

Query:  T-----NSSSP---SYGFRPSNIM
        +      SSSP    YGF P+ +M
Subjt:  T-----NSSSP---SYGFRPSNIM

Q84X40 Protein SPEAR19.3e-1639.57Show/hide
Query:  MGSGYFGEPS-LGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF---HPTSYTFANDQEVARVQTGYASVPSSTN
        MGS +FG P+ +G+   S S +SSS S ++RRGKK  N  ++P+QPQRGLGVAQLEKIRLHGE++   F   +P+ Y     QE  R+Q GY+S+PS   
Subjt:  MGSGYFGEPS-LGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF---HPTSYTFANDQEVARVQTGYASVPSSTN

Query:  SSSPSYGFRPSNIM-------------WT------------------------ESRRRKRQERSGNMGQNSEACESQELDLELRLSI
         SS  YGF P+ +M             W                          S   +R +  G+  Q+S + E+QE+DLELRLS+
Subjt:  SSSPSYGFRPSNIM-------------WT------------------------ESRRRKRQERSGNMGQNSEACESQELDLELRLSI

Arabidopsis top hitse value%identityAlignment
AT2G20080.1 unknown protein6.6e-1739.57Show/hide
Query:  MGSGYFGEPS-LGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF---HPTSYTFANDQEVARVQTGYASVPSSTN
        MGS +FG P+ +G+   S S +SSS S ++RRGKK  N  ++P+QPQRGLGVAQLEKIRLHGE++   F   +P+ Y     QE  R+Q GY+S+PS   
Subjt:  MGSGYFGEPS-LGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF---HPTSYTFANDQEVARVQTGYASVPSSTN

Query:  SSSPSYGFRPSNIM-------------WT------------------------ESRRRKRQERSGNMGQNSEACESQELDLELRLSI
         SS  YGF P+ +M             W                          S   +R +  G+  Q+S + E+QE+DLELRLS+
Subjt:  SSSPSYGFRPSNIM-------------WT------------------------ESRRRKRQERSGNMGQNSEACESQELDLELRLSI

AT2G20080.2 unknown protein8.1e-1541.77Show/hide
Query:  MGSGYFGEPS-LGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSS
        MGS +FG P+ +G+   S S +SSS S ++RRGKK  N  ++P+QPQRGLGVAQLEKIRLHGE++   F+  + +      V R Q   A     T S +
Subjt:  MGSGYFGEPS-LGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSS

Query:  PSYGFRPSN-----------IMWTESRRRKRQERSGNMGQNSEACESQELDLELRLSI
        PSYG   S            +    S   +R +  G+  Q+S + E+QE+DLELRLS+
Subjt:  PSYGFRPSN-----------IMWTESRRRKRQERSGNMGQNSEACESQELDLELRLSI

AT4G28840.1 unknown protein1.9e-1650Show/hide
Query:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF------HPTSYTFANDQEVARVQTGYASVPSS
        MGS +FG P +G    S SS +SS S  ++RGK  + SDK P+QPQRGLGVAQLEKIRLHGE     F      HP++Y     QE  R+Q GY S+PSS
Subjt:  MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGF------HPTSYTFANDQEVARVQTGYASVPSS

Query:  T-----NSSSP---SYGFRPSNIM
        +      SSSP    YGF P+ +M
Subjt:  T-----NSSSP---SYGFRPSNIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGTGGTTATTTTGGGGAGCCAAGTTTAGGGAATGAAAGAGGGAGTGGATCGTCTTCGTCGTCGTCACCGTCGTTGTCGTCAAGAAGAGGGAAGAAGGGTAGTAA
TTCTGATAAGCAGCCAAGGCAACCACAAAGAGGACTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTTCTGCTGGTTTTCATCCCACTTCCTACA
CTTTCGCTAATGACCAAGAGGTAGCGAGAGTGCAGACGGGTTATGCGTCGGTACCATCGTCGACTAATTCTTCCTCGCCGTCTTATGGCTTCCGACCCTCCAATATTATG
TGGACAGAGAGTAGAAGGAGGAAAAGGCAAGAGAGGAGTGGAAATATGGGTCAAAATTCAGAAGCATGTGAGAGTCAAGAATTAGACTTGGAGCTTAGACTCTCAATAAT
C
mRNA sequenceShow/hide mRNA sequence
AAAAAAACTGCTTTAAAGGCTTCAAGTTTTCAGATCCCCTCTTGATTCCTTAGCATATCTTTTCTTTTTTCATTGTTCTTCATTTTGGTAGAAGATTTTTGGAAATTGAT
CAAGTGATTTTGTGTTAATTAAATTAGTTGTGTTATTAATGGGGAGTGGTTATTTTGGGGAGCCAAGTTTAGGGAATGAAAGAGGGAGTGGATCGTCTTCGTCGTCGTCA
CCGTCGTTGTCGTCAAGAAGAGGGAAGAAGGGTAGTAATTCTGATAAGCAGCCAAGGCAACCACAAAGAGGACTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGG
TGAAATTGCTTCTGCTGGTTTTCATCCCACTTCCTACACTTTCGCTAATGACCAAGAGGTAGCGAGAGTGCAGACGGGTTATGCGTCGGTACCATCGTCGACTAATTCTT
CCTCGCCGTCTTATGGCTTCCGACCCTCCAATATTATGTGGACAGAGAGTAGAAGGAGGAAAAGGCAAGAGAGGAGTGGAAATATGGGTCAAAATTCAGAAGCATGTGAG
AGTCAAGAATTAGACTTGGAGCTTAGACTCTCAATAATC
Protein sequenceShow/hide protein sequence
MGSGYFGEPSLGNERGSGSSSSSSPSLSSRRGKKGSNSDKQPRQPQRGLGVAQLEKIRLHGEIASAGFHPTSYTFANDQEVARVQTGYASVPSSTNSSSPSYGFRPSNIM
WTESRRRKRQERSGNMGQNSEACESQELDLELRLSII