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Lsi06G008860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G008860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFRIGIDA-like protein
Genome locationchr06:18425601..18425801
RNA-Seq ExpressionLsi06G008860
SyntenyLsi06G008860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD44715.1 TPA_asm: hypothetical protein HUJ06_002945 [Nelumbo nucifera]5.3e-0878.05Show/hide
Query:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        FYSS P  +PYDA+SYSQNFDQG+A  E DNLSRSFSARFA
Subjt:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

KAE8653121.1 hypothetical protein Csa_019717, partial [Cucumis sativus]7.6e-2387.69Show/hide
Query:  MLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQHL
        +LE   TTTFYSSGPKLIPYD FSYSQNFDQGTAGEELDNLSRSFSARFALA+VAS  FLHKQHL
Subjt:  MLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQHL

KAF5191987.1 hypothetical protein FRX31_018427 [Thalictrum thalictroides]3.4e-0773.17Show/hide
Query:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        FYSS P  +PYDA++YSQNFDQGTA  E DNL RSFSAR+A
Subjt:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

KAG6587950.1 hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1067.21Show/hide
Query:  EECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQ
        E+   TT YSSG  LIPYD FSYS NFDQG A EE D L RSFSARFALA+ AS  FL  Q
Subjt:  EECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQ

KAG7021839.1 hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-0969.64Show/hide
Query:  TTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQ
        TT YSSG  LIPYD FSYS NFDQG A E+ D L RSFSARFALA+ AS  FL  Q
Subjt:  TTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LWX3 Uncharacterized protein3.7e-2387.69Show/hide
Query:  MLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQHL
        +LE   TTTFYSSGPKLIPYD FSYSQNFDQGTAGEELDNLSRSFSARFALA+VAS  FLHKQHL
Subjt:  MLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQHL

A0A151S3I6 Uncharacterized protein4.1e-0668.29Show/hide
Query:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        F S+ P  +PYD +SYSQNFDQGTA +E DNLSRSF  RFA
Subjt:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A2G5FAL4 Uncharacterized protein1.1e-0661.22Show/hide
Query:  LEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        L++ +   F SS P  +PYDA++YSQNFDQGTA  E DNL RSFSAR+A
Subjt:  LEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A371GGA5 Uncharacterized protein (Fragment)2.4e-0668.29Show/hide
Query:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        F S+ P  +PYD ++YSQNFDQGTA +E DNLSRSFS RFA
Subjt:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A7J6W4V3 Uncharacterized protein1.7e-0773.17Show/hide
Query:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        FYSS P  +PYDA++YSQNFDQGTA  E DNL RSFSAR+A
Subjt:  FYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25735.1 unknown protein8.4e-0450Show/hide
Query:  SSGPKLIPYDAFSYSQNFDQGTA---GEELDNLSRSFSARFA
        +S  K++ Y+   YS NFDQG      +E +NLSRSFS RFA
Subjt:  SSGPKLIPYDAFSYSQNFDQGTA---GEELDNLSRSFSARFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAGAGTGTGAAACGACGACGTTTTATTCTTCAGGCCCCAAGTTGATTCCTTACGATGCTTTCTCTTATTCTCAGAATTTCGATCAAGGCACCGCCGGTGAAGA
ACTTGATAATCTTTCCCGATCCTTCTCCGCCCGCTTCGCTCTCGCCAATGTTGCTTCCACAATCTTTCTTCACAAACAACATCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAAGAGTGTGAAACGACGACGTTTTATTCTTCAGGCCCCAAGTTGATTCCTTACGATGCTTTCTCTTATTCTCAGAATTTCGATCAAGGCACCGCCGGTGAAGA
ACTTGATAATCTTTCCCGATCCTTCTCCGCCCGCTTCGCTCTCGCCAATGTTGCTTCCACAATCTTTCTTCACAAACAACATCTTCAATAA
Protein sequenceShow/hide protein sequence
MLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFALANVASTIFLHKQHLQ